Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq3560 114 1e-20 seq7337 82.4 7e-11 >seq3560 Length=1522174 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | ||||| || || | ||||||||| | || || | ||||| || | Sbjct 965684 AATGCAAATATTTGTTAAGACTCTGACTGGAAAAACTATCACTTTGGAAGTGGAACCGTC 965743 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||| ||| | ||||| ||||| || || |||||||| |||||||| || Sbjct 965744 AGACACCATTGAGAACGTCAAGGCCAAGATCCAAGATAAGGAAGGCATTCCTCCCGACCA 965803 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||||||| |||| | || ||||| || || ||||||| ||||| | | |||||||| Sbjct 965804 ACAGAGATTGATCTTCGCTGGCAAACAGCTGGAAGATGGCAGAACCCTTTCAGATTATAA 965863 Query 24170 CATTCAAAAAG 24180 ||| ||||||| Sbjct 965864 CATCCAAAAAG 965874 Score = 95.1 bits (104), Expect = 1e-14 Identities = 137/191 (72%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || ||| | |||||||| | || || | ||||| ||| ||| | Sbjct 967207 ATGCAAATATTCGTTAAGACACTGACTGGAAAGACCATCACACTGGAAGTGGAG-CCATC 967265 Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || ||| | || || ||| || |||||||||||||| || || || || Sbjct 967266 AGACACTATTGAGAATGTTAAGGCAAAAATCCAGGACAAAGAAGGCATTCCACCAGACCA 967325 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||||||| |||| | | ||||| || || ||||||| | | | || |||||||| Sbjct 967326 ACAGAGATTGATATTTGCTGGCAAACAGCTGGAAGATGGCCGTACACTCTCTGATTATAA 967385 Query 24170 CATTCAAAAAG 24180 |||||| |||| Sbjct 967386 CATTCAGAAAG 967396 >seq7337 Length=451322 Score = 82.4 bits (90), Expect = 7e-11 Identities = 114/160 (71%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 |||||||| | || || ||||| || ||||| || | || || | |||||||| ||| Sbjct 238307 AAAATGCAGATCTTCGTTAAAACTTTGACTGGGAAGACCATCACTTTGGAAGTCGAAGCC 238366 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 ||| || || ||| | || || || ||| ||||||||||| || || || ||| Sbjct 238367 TCCGATACTATTGAGAATGTAAAGGCCAAAATTCAGGACAAAGAAGGAATTCCCCCTGAT 238426 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG 24147 || || ||| |||||| || ||||| || | ||||||| Sbjct 238427 CAGCAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATG 238466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429882731735730