Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq2348 87.8 2e-12 seq3560 82.4 7e-11 >seq2348 Length=1756034 Score = 87.8 bits (96), Expect = 2e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 145666 GCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTG 145725 |||||||| || ||||| | |||| ||| || |||||||||||||| || |||||||| Sbjct 614267 GCTGTATTCAACTATCTCAGTACACAGATTACTGCATTTGATGGTTCCAAGGTTTTGCTG 614208 Query 145726 ATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCAT 145761 |||| ||| || ||||| || || ||||| ||||| Sbjct 614207 ATTAGATTTTCTATTGCAAGCATCTTTGTATAGCAT 614172 >seq3560 Length=1522174 Score = 82.4 bits (90), Expect = 7e-11 Identities = 133/190 (70%), Gaps = 1/190 (1%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| |||||||||||||| | || || ||||| ||||| || || || ||| Sbjct 973150 CCTTCTGAATGTTGTAATCTGAGAGTGTTCGGCCATCCTCCAGCTGTTTACCAGCAAAGA 973091 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | || | ||||||||| || || || ||||| ||||| ||| || ||| | | || Sbjct 973090 TCAATCTCTGCTGGTCAGGTGGAATGCCTTCCTTGTCTTGGATCTT-GCCTTAACATTCT 973032 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | ||||| | | || | || | ||||| ||||| || || |||||||| |||| Sbjct 973031 CAATCGTATCTGATGGTTCCACTTCAAGGGTAATAGTTTTTCCCGTAAGAGTTTTGACGA 972972 Query 131225 AAATCTGCAT 131234 | |||||||| Sbjct 972971 AGATCTGCAT 972962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471952818973440