Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq3560 131 1e-25 seq7337 102 7e-17 seq1460 95.1 1e-14 >seq3560 Length=1522174 Score = 131 bits (144), Expect = 1e-25 Identities = 143/190 (75%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||||||||| || ||||| |||| || || |||||||| | ||||||||| | || Sbjct 967207 ATGCAAATATTCGTTAAGACACTGACTGGAAAGACCATCACACTGGAAGTGGAGCCATCA 967266 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||||||| ||| | ||| ||||||| ||||||||||| |||||||| |||||| Sbjct 967267 GACACTATTGAGAATGTTAAGGCAAAAATCCAGGACAAAGAAGGCATTCCACCAGACCAA 967326 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| | | || ||||| |||||||| | ||||||| || || | ||||| || Sbjct 967327 CAGAGATTGATATTTGCTGGCAAACAGCTGGAAGATGGCCGTACACTCTCTGATTATAAC 967386 Query 25179 ATTCAAAAAG 25188 ||||| |||| Sbjct 967387 ATTCAGAAAG 967396 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || ||||| | || || ||| | || || | ||||||||| |||| Sbjct 970989 AATGCAGATCTTCGTTAAGACACTTACAGGGAAAACTATAACTCTTGAAGTGGAGCCGTC 971048 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||| ||| ||||| || ||| ||||| ||||| |||||||||||||| Sbjct 971049 AGACACTATTGAGAACGTGAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCA 971108 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||| || | || ||||| || || || | ||||||| || || | |||||||| Sbjct 971109 ACAGAGGTTGATCTTTGCAGGAAAGCAGCTTGAAGATGGCCGAACCCTCTCTGATTACAA 971168 Query 25178 TATTCAAAAAG 25188 |||||||||| Sbjct 971169 CATTCAAAAAG 971179 Score = 102 bits (112), Expect = 7e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||||||||| |||||| |||| || ||| | ||||| | |||||||| |||| Sbjct 965684 AATGCAAATATTTGTTAAGACTCTGACTGGAAAAACTATCACTTTGGAAGTGGAACCGTC 965743 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || ||| | ||| || ||| || || ||||| ||||| || ||||| Sbjct 965744 AGACACCATTGAGAACGTCAAGGCCAAGATCCAAGATAAGGAAGGCATTCCTCCCGACCA 965803 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||| | | || || || |||||||| | ||||||| | || | ||||| || Sbjct 965804 ACAGAGATTGATCTTCGCTGGCAAACAGCTGGAAGATGGCAGAACCCTTTCAGATTATAA 965863 Query 25178 TATTCAAAAAG 25188 || ||||||| Sbjct 965864 CATCCAAAAAG 965874 Score = 91.5 bits (100), Expect = 1e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| | || || || | || || | |||||||| | || Sbjct 967773 ATGCAAATCTTTGTCAAGACACTCACTGGAAAGACAATTACTCTGGAAGTGGAACCTTCA 967832 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || ||| | ||| ||||||| ||||| ||||| |||||||||||||| Sbjct 967833 GACACCATTGAGAATGTTAAGGCAAAAATCCAGGACAAGGAAGGCATTCCACCTGACCAG 967892 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| | | || ||||| || ||||| | || |||| || || | |||||||| Sbjct 967893 CAGAGATTGATCTTTGCTGGTAAACAGCTGGAGGATGGCCGAACACTCTCAGATTACAAC 967952 Query 25179 ATTCAAAAAG 25188 || || |||| Sbjct 967953 ATCCAGAAAG 967962 Score = 89.7 bits (98), Expect = 4e-13 Identities = 136/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || | || || ||||||| ||| | ||| Sbjct 965389 ATGCAGATCTTCGTCAAGACCCTTACAGGGAAGACTATTACCCTCGAAGTTGAGCCTTCT 965448 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || || || ||||| | |||| ||| || || || || || || || ||||| Sbjct 965449 GATACAATTGAAAATGTGAAGGCTAAAATTCAA-GATAAGGAGGGAATCCCGCCCGACCA 965507 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||| | | |||||||| || || ||||||||||||| ||||| | || ||||| Sbjct 965508 ACAGAGACTGATTTTTGCTGGAAAGCAATTAGAAGATGGCCGCACACTTTCAGACTACAA 965567 Query 25178 TATTCAAAAAG 25188 |||||||||| Sbjct 965568 CATTCAAAAAG 965578 >seq7337 Length=451322 Score = 102 bits (112), Expect = 7e-17 Identities = 157/221 (71%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||| | ||||| || ||||||| | || || ||| | || Sbjct 240000 ATGCAGATCTTCGTGAAGACTCTTACCGGGAAGACCATCACCCTGGAGGTTGAGCCATCA 240059 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || | || |||| |||| || || || || || || ||||||||| Sbjct 240060 GACACAATTGAA--AATGTAAAAGCCAAAATCCAA-GATAAGGAGGGTATCCCACCTGAC 240116 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||| | | || ||||| ||||| || | || |||| || || || ||| || Sbjct 240117 CAACAGAGACTCATCTTTGCTGGCAAGCAGCTTGAGGATGGACGTACCTTGTCCGACTAT 240176 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 |||||||| |||||||| || || ||| | || || ||||| Sbjct 240177 AATATTCAGAAAGAATCAACACTTCATCTTGTTCTTAGGCT 240217 Score = 98.7 bits (108), Expect = 9e-16 Identities = 141/195 (72%), Gaps = 3/195 (2%) Strand=Plus/Plus Query 24993 GGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAG 25052 |||| |||||| || || || || |||||||| || || ||||||| | ||||| || Sbjct 238305 GGAA-AATGCAGATCTTCGTTAAAACTTTGACTGGGAAGACCATCACTTTGGAAGTCGAA 238363 Query 25053 TCGTCTGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACC 25111 | || || ||||| ||| | ||| | |||| ||| ||||||||||| ||||| || Sbjct 238364 GCCTCCGATACTATTGAGAATGTAAAGGCCAAAATTCAG-GACAAAGAAGGAATTCCCCC 238422 Query 25112 TGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGA 25171 ||| || || | | ||||| || |||||||| || ||||||| ||||| | || Sbjct 238423 TGATCAGCAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGCCGCACGCTCTCAGA 238482 Query 25172 TTACAATATTCAAAA 25186 |||||||| || || Sbjct 238483 CTACAATATCCAGAA 238497 >seq1460 Length=1689650 Score = 95.1 bits (104), Expect = 1e-14 Identities = 137/191 (72%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || ||||| || || || |||||| | || || | || || ||| | | Sbjct 1136790 ATGCAGATTTTCGTAAAAACCTTAACGGGTAAAACGATAACCCTTGAGGTTGAGCCAGCG 1136731 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || ||||| | |||| ||| || |||||||| |||||||||||||| Sbjct 1136730 GACACCATTGAAAATGTGAAGGCTAAAATTCAG-GATAAAGAAGGAATTCCACCTGACCA 1136672 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || || ||||||| || || || ||| | ||||||| | ||| | |||||||| Sbjct 1136671 GCAAAGGCTTATTTTCGCTGGAAAGCAACTTGAAGATGGGAGAACTCTTTCAGATTACAA 1136612 Query 25178 TATTCAAAAAG 25188 ||| || |||| Sbjct 1136611 TATCCAGAAAG 1136601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433274311473290