Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq358 84.2 5e-13 seq9057 82.4 2e-12 >seq358 Length=307977 Score = 84.2 bits (92), Expect = 5e-13 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 3347 TCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGGAAA 3406 |||| |||| ||| || ||| || || ||||| | |||| | || || | ||| Sbjct 252682 TCTTCCCAAGAATGACCAAATGCACCTTCCACAAGTTCGGTTCCTCCGGAGAGGTCGAAC 252741 Query 3407 ACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCC 3466 |||| | ||||||||||||| ||||| |||||||||||||||||||| |||| Sbjct 252742 GGCACGACGCCGTCTGCATCCTCCCTCTCAACGTCGTCAACGAGAAGATCTACATCTTCC 252801 Query 3467 TCTGGTTCTGGTTC 3480 ||||||| |||||| Sbjct 252802 TCTGGTTTTGGTTC 252815 >seq9057 Length=2327757 Score = 82.4 bits (90), Expect = 2e-12 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 3373 TTTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCG 3432 || ||||||||||||||||| || || || | || | ||| || |||||| | | || Sbjct 1762232 TTCCACAAATACGGTCCTTCCGGTTCGGTGCAGAAGTTCGACGGCCTCTGCGTGTTACCC 1762173 Query 3433 GAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTCTACGTGCTAGCC 3492 ||| | |||||||| ||||||||| | ||||||||||| ||||| ||||| || Sbjct 1762172 CTCAACATCGTCAACGAAAAGATCTACGTGTTCCTCTGGTTTTGGTTTGTGGTGCTCTCC 1762113 Query 3493 ATCAT 3497 |||| Sbjct 1762112 GTCAT 1762108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12478612341000