Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq2170 156 4e-33 >seq2170 Length=2407512 Score = 156 bits (172), Expect = 4e-33 Identities = 238/339 (70%), Gaps = 0/339 (0%) Strand=Plus/Plus Query 20242 AGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCC 20301 ||||| || |||| |||||| || || | || || || |||||||| ||||||||||| Sbjct 1141098 AGTAATGTGTGCAATCATATACGTCAATAATGAGTAACTTGCAATGTTGAAAGGAACTCC 1141157 Query 20302 CAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATA 20361 | ||| | ||| | ||||| ||||| ||||| || ||||| || || | ||| ||||| Sbjct 1141158 AAGACCAACATCTGCTGACCTTTGATAGAGCTGGCAAGAAAGTTCTCCATTAGCAACATA 1141217 Query 20362 AAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCA 20421 ||| ||| || ||||||| || || | |||||| | | || || |||||||| Sbjct 1141218 AAACTGAACCAAACAGTGACAAGGTGGTAAAGCCATCTTTGGAACATCAGCTGGGTTCCA 1141277 Query 20422 CGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGA 20481 |||||||| | ||||| | ||| | || || | ||| || | ||| | | Sbjct 1141278 AGCACACATTAATATTCTGCGATCATTTGGGTTGGTACGAATTTTTTCAATAATTTGAGC 1141337 Query 20482 CAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAA 20541 |||||| || | || | || | ||||||| ||| | || ||| | |||||||| Sbjct 1141338 CAATTGATCCACTCCTTTTCCAGAATAGTCATCATTCATAGTCATGTATTCAGCCCCAAA 1141397 Query 20542 GTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCC 20580 |||||||||||| || || || ||||| ||||| || || Sbjct 1141398 GTGCCTCCACTGAAATCCATACACAGGACCCAAGTCACC 1141436 Score = 156 bits (172), Expect = 4e-33 Identities = 238/339 (70%), Gaps = 0/339 (0%) Strand=Plus/Plus Query 20242 AGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCC 20301 ||||| || |||| |||||| || || | || || || |||||||| ||||||||||| Sbjct 1148792 AGTAATGTGTGCAATCATATACGTCAATAATGAGTAACTTGCAATGTTGAAAGGAACTCC 1148851 Query 20302 CAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATA 20361 | ||| | ||| | ||||| ||||| ||||| || ||||| || || | ||| ||||| Sbjct 1148852 AAGACCAACATCTGCTGACCTTTGATAGAGCTGGCAAGAAAGTTCTCCATTAGCAACATA 1148911 Query 20362 AAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCA 20421 ||| ||| || ||||||| || || | |||||| | | || || |||||||| Sbjct 1148912 AAACTGAACCAAACAGTGACAAGGTGGTAAAGCCATCTTTGGAACATCAGCTGGGTTCCA 1148971 Query 20422 CGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGA 20481 |||||||| | ||||| | ||| | || || | ||| || | ||| | | Sbjct 1148972 AGCACACATTAATATTCTGCGATCATTTGGGTTGGTACGAATTTTTTCAATAATTTGAGC 1149031 Query 20482 CAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAA 20541 |||||| || | || | || | ||||||| ||| | || ||| | |||||||| Sbjct 1149032 CAATTGATCCACTCCTTTTCCAGAATAGTCATCATTCATAGTCATGTATTCAGCCCCAAA 1149091 Query 20542 GTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCC 20580 |||||||||||| || || || ||||| ||||| || || Sbjct 1149092 GTGCCTCCACTGAAATCCATACACAGGACCCAAGTCACC 1149130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441316712551440