Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq7337 123 2e-23 seq3560 109 5e-19 seq1460 104 2e-17 >seq7337 Length=451322 Score = 123 bits (136), Expect = 2e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 64256 TTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATG 64315 || || || ||||| |||| || ||||| | ||||| | ||| ||||| || |||| Sbjct 238497 TTCTGGATATTGTAGTCTGAGAGCGTGCGGCCATCTTCCAACTGTTTGCCAGCGAAAATC 238438 Query 64316 AGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCC 64375 | | ||||| || || |||||||||||||| || || ||||| ||||||| ||| Sbjct 238437 AATCTTTGCTGATCAGGGGGAATTCCTTCTTTGTCCTGAATTTTGGCCTTTACATTCTCA 238378 Query 64376 ACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAA 64435 | ||||| ||| || ||||| | ||| | |||||| || ||||||||||| ||||| Sbjct 238377 ATAGTATCGGAGGCTTCGACTTCCAAAGTGATGGTCTTCCCAGTCAAAGTTTTAACGAAG 238318 Query 64436 ATTTGCATTTT 64446 || |||||||| Sbjct 238317 ATCTGCATTTT 238307 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || | ||||| || ||||||| || |||||||| ||||| || || || | Sbjct 240227 ACCACCACGAAGCCTAAGAACAAGATGAAGTGTTGATTCTTTCTGAATATTATAGTCGGA 240168 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| || | || |||||||||||||| ||| | ||||| | ||| ||||| || || Sbjct 240167 CAAGGTACGTCCATCCTCAAGCTGCTTGCCAGCAAAGATGAGTCTCTGTTGGTCAGGTGG 240108 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || ||||| ||||| |||||| || | ||| || | || || Sbjct 240107 GATACCCTCCTTATCTTGGATTTTGGCTTTTACATTTTCAATTGTGTCTGATGGCTCAAC 240048 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||| ||||| | ||| || ||||| || ||||| Sbjct 240047 CTCCAGGGTGATGGTCTTCCCGGTAAGAGTCTTCACGAAGATCTGCAT 240000 >seq3560 Length=1522174 Score = 109 bits (120), Expect = 5e-19 Identities = 141/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 64254 CTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAA 64313 ||||||||||||||||||| | || ||| || | |||||||||||||| || ||| | | Sbjct 971179 CTTTTTGAATGTTGTAATCAGAGAGGGTTCGGCCATCTTCAAGCTGCTTTCCTGCAAAGA 971120 Query 64314 TGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCT 64373 | | || ||| ||||| || ||||| ||||| || ||||| || || ||| || || Sbjct 971119 TCAACCTCTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGCCTTCACGTTCT 971060 Query 64374 CCACTGTATC-ACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 | | || || |||| |||||||| | ||||| || || || || | || || ||| Sbjct 971059 CAATAGTGTCTGACGGC-TCCACTTCAAGAGTTATAGTTTTCCCTGTAAGTGTCTTAACG 971001 Query 64433 AAAATTTGCATT 64444 || || |||||| Sbjct 971000 AAGATCTGCATT 970989 Score = 102 bits (112), Expect = 8e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 64254 CTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAA 64313 ||||||||||||||||||| | || ||| || | || || | |||||| || ||| | | Sbjct 971483 CTTTTTGAATGTTGTAATCAGAGAGGGTACGACCATCCTCCAACTGCTTTCCTGCAAAGA 971424 Query 64314 TGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCT 64373 | | | ||||||||| |||||||| || ||||| || || || || ||| || || Sbjct 971423 TCAATCTCTGCTGGTCAGGAGGAATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTCT 971364 Query 64374 CCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGA 64433 | | || || | |||||||| | ||||| || || || || | || || |||| Sbjct 971363 CAATAGTGTCTGACGGTTCCACTTCAAGAGTTATAGTTTTCCCTGTAAGTGTCTTGACGA 971304 Query 64434 AAATTTGCATT 64444 ||||||||||| Sbjct 971303 AAATTTGCATT 971293 Score = 100 bits (110), Expect = 3e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 64254 CTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAA 64313 |||||||||||||||| |||| | ||||| | ||||| | ||||| || ||| ||| Sbjct 965578 CTTTTTGAATGTTGTAGTCTGAAAGTGTGCGGCCATCTTCTAATTGCTTTCCAGCAAAAA 965519 Query 64314 TGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCT 64373 | || | ||| |||||||| || ||||| || || ||||| ||||| ||| ||| | Sbjct 965518 TCAGTCTCTGTTGGTCGGGCGGGATTCCCTCCTTATCTTGAATTTTAGCCTTCACATTTT 965459 Query 64374 CCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGA 64433 | | ||||||| | || ||||| | || | ||||| || || | || || |||| Sbjct 965458 CAATTGTATCAGAAGGCTCAACTTCGAGGGTAATAGTCTTCCCTGTAAGGGTCTTGACGA 965399 Query 64434 AAATTTGCAT 64443 | || ||||| Sbjct 965398 AGATCTGCAT 965389 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 64254 CTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAA 64313 ||||||| ||||| ||||||| | ||| | | ||||| ||||| ||||| || | | Sbjct 965874 CTTTTTGGATGTTATAATCTGAAAGGGTTCTGCCATCTTCCAGCTGTTTGCCAGCGAAGA 965815 Query 64314 TGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCT 64373 | | | ||| |||||||||||||| ||||| || ||||| || || ||| || || Sbjct 965814 TCAATCTCTGTTGGTCGGGAGGAATGCCTTCCTTATCTTGGATCTTGGCCTTGACGTTCT 965755 Query 64374 CCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGA 64433 | | || || | |||||||| | ||| | || || || |||| ||| || || | Sbjct 965754 CAATGGTGTCTGACGGTTCCACTTCCAAAGTGATAGTTTTTCCAGTCAGAGTCTTAACAA 965695 Query 64434 AAATTTGCATT 64444 | ||||||||| Sbjct 965694 ATATTTGCATT 965684 Score = 91.5 bits (100), Expect = 1e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 64254 CTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAA 64313 |||| || ||||||||||||| || || || | || || ||||| || || ||| | | Sbjct 967962 CTTTCTGGATGTTGTAATCTGAGAGTGTTCGGCCATCCTCCAGCTGTTTACCAGCAAAGA 967903 Query 64314 TGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCT 64373 | | | ||||||||| || ||||| ||||| || || || |||||| ||| ||| || Sbjct 967902 TCAATCTCTGCTGGTCAGGTGGAATGCCTTCCTTGTCCTGGATTTTTGCCTTAACATTCT 967843 Query 64374 CCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGA 64433 | | || || | |||||||| | ||| | ||||| || || | || || || | Sbjct 967842 CAATGGTGTCTGAAGGTTCCACTTCCAGAGTAATTGTCTTTCCAGTGAGTGTCTTGACAA 967783 Query 64434 AAATTTGCAT 64443 | |||||||| Sbjct 967782 AGATTTGCAT 967773 Score = 89.7 bits (98), Expect = 5e-13 Identities = 134/189 (71%), Gaps = 1/189 (1%) Strand=Plus/Minus Query 64256 TTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATG 64315 || |||||||||||||||| || || || | || || ||||| || || ||| | || Sbjct 973148 TTCTGAATGTTGTAATCTGAGAGTGTTCGGCCATCCTCCAGCTGTTTACCAGCAAAGATC 973089 Query 64316 AGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCC 64375 | | ||||||||| || ||||| ||||| || ||||| | | || ||| ||| ||| Sbjct 973088 AATCTCTGCTGGTCAGGTGGAATGCCTTCCTTGTCTTGGA-TCTTGCCTTAACATTCTCA 973030 Query 64376 ACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAA 64435 | ||||| | |||||||| | || | || || || || | |||||| ||||| Sbjct 973029 ATCGTATCTGATGGTTCCACTTCAAGGGTAATAGTTTTTCCCGTAAGAGTTTTGACGAAG 972970 Query 64436 ATTTGCATT 64444 || |||||| Sbjct 972969 ATCTGCATT 972961 >seq1460 Length=1689650 Score = 104 bits (114), Expect = 2e-17 Identities = 137/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 64254 CTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAA 64313 |||| || || |||||||||| | || | | | |||||||| ||||| || || ||| Sbjct 1136601 CTTTCTGGATATTGTAATCTGAAAGAGTTCTCCCATCTTCAAGTTGCTTTCCAGCGAAAA 1136660 Query 64314 TGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCT 64373 | |||| |||||||| || |||||||||||||| || || ||||| ||| ||| | Sbjct 1136661 TAAGCCTTTGCTGGTCAGGTGGAATTCCTTCTTTATCCTGAATTTTAGCCTTCACATTTT 1136720 Query 64374 CCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGA 64433 | | || || | | || || || | |||| || || || || || |||||||||| Sbjct 1136721 CAATGGTGTCCGCTGGCTCAACCTCAAGGGTTATCGTTTTACCCGTTAAGGTTTTTACGA 1136780 Query 64434 AAATTTGCAT 64443 |||| ||||| Sbjct 1136781 AAATCTGCAT 1136790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499581307637040