Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_011357.1 Length=62147 Score E Sequences producing significant alignments: (Bits) Value seq1583 432 1e-116 seq5787 188 3e-43 >seq1583 Length=19961 Score = 432 bits (478), Expect = 1e-116 Identities = 356/434 (82%), Gaps = 0/434 (0%) Strand=Plus/Plus Query 15237 GGAAACCCTCAGTATCAGCTGTGAGGTAACGTTCCGGCACGGGACGCTCCGCTTCAATGG 15296 |||| || ||| | | ||| || || | |||| |||||||||| |||||| | ||||| Sbjct 228 GGAAGCCTTCAATCTGTCCTGCGAAGTCATGTTCAGGCACGGGACTCTCCGCCTGAATGG 287 Query 15297 CAATGTCAGCGAAAAGCTCCTGACTCTGCTGATACAGGAACTGAAGCGATGATCCCGTTA 15356 | ||||||||| | || ||||| || |||||||||| || || ||||||||||| | Sbjct 288 CGCCGTCAGCGAAGATCTACTGACGATGTTGATACAGGAGCTCAAACGATGATCCCGCTG 347 Query 15357 CCTTCCGGGACCAAAATTTGGCTGGTTGCCGGTATCACCGATATGAGAAATGGCTTCAAC 15416 || ||| || ||||| ||| |||| |||||||||||||| |||||||| |||||||| Sbjct 348 CCGGTCGGCACAAAAATCTGGTTGGTGGCCGGTATCACCGACATGAGAAACGGCTTCAAT 407 Query 15417 GGCCTGGCTGCGAAAGTACAAACGGCGCTGAAAGACGATCCCATGTCCGGCCATGTTTTC 15476 || ||||| || ||||| ||||| ||||||||||||||||| ||||||||||| | || Sbjct 408 GGTCTGGCAGCCAAAGTGCAAACCGCGCTGAAAGACGATCCGCTGTCCGGCCATCTCTTT 467 Query 15477 ATTTTCCGGGGCCGCAGCGGCAGTCAGGTTAAACTGCTGTGGTCCACCGGTGACGGACTG 15536 || |||||||| ||||| ||||| ||||| ||||| || |||||||||||||| || ||| Sbjct 468 ATCTTCCGGGGGCGCAGTGGCAGCCAGGTCAAACTCCTCTGGTCCACCGGTGATGGGCTG 527 Query 15537 TGCCTCCTGACCAAACGGCTGGAGCGTGGGCGCTTCGCCTGGCCGTCAGCCCGTGATGGC 15596 ||||| ||||| |||||||| ||||| || || ||||||||||| |||||||||||||| Sbjct 528 TGCCTGCTGACAAAACGGCTAGAGCGAGGTCGGTTCGCCTGGCCTTCAGCCCGTGATGGA 587 Query 15597 AAAGTGTTCCTTACGCAGGCGCAGCTGGCGATGCTGCTGGAAGGTATCGACTGGCGACAG 15656 ||||||||||| |||| ||||| || ||||||||| |||| |||||||||||||| || Sbjct 588 AAAGTGTTCCTGACGCCAGCGCAACTCGCGATGCTGATGGAGGGTATCGACTGGCGGCAT 647 Query 15657 CCTAAGCGGCTGCT 15670 ||||| || ||||| Sbjct 648 CCTAAACGCCTGCT 661 >seq5787 Length=3763 Score = 188 bits (208), Expect = 3e-43 Identities = 224/304 (74%), Gaps = 0/304 (0%) Strand=Plus/Minus Query 16664 TGCAAGCGGATGCGTACGCCGGGTTCAACGAGCTGTATCGCAATGGTGGGATAACGGAAG 16723 |||| || ||||||||||||||||||||||||||||| ||| || |||| ||||| Sbjct 3763 TGCAGGCAGATGCGTACGCCGGGTTCAACGAGCTGTACCGCGCAGGACACATAAAGGAAG 3704 Query 16724 CTGCCTGCTGGGCTCATGCCCGCCGAAAGATCCACGATGTGCACGTCCGCATCCCGTCAG 16783 | || |||||||| |||||||| || || ||||| || || || | ||||| || || | Sbjct 3703 CAGCTTGCTGGGCCCATGCCCGGCGTAAAATCCATGACGTCCATGCCCGCACACCCTCGG 3644 Query 16784 CACTGACGGAAGAAGCCCTGGAGCAGATCGGTCAGTTGTACGCCATAGAGGCGGATATAA 16843 || || || || || ||| | | ||||| || |||| ||||| || || || | Sbjct 3643 CAACCACAGAGGAGGCACTGAAACGCATCGGCCAACTGTATGCCATCGAAGCAGAGCTGC 3584 Query 16844 GGGGAATGCCGGCAGAGCAGCGGCTTGCTGAACGTCAGCGAAAAACGAAACCGTTGTTGA 16903 | || | ||||||||||| || || || | |||||| | ||| ||||| || ||| Sbjct 3583 GCGGGTTACCGGCAGAGCAACGACTGGCACAGCGTCAGTTGAGAACAAAACCTCTGCTGA 3524 Query 16904 AATCCCTGGAAAGCTGGTTGCGTGAAAAGATGAAGACCCTGTCGCGACACTCAGAGTTGG 16963 | ||||| | ||| |||| ||||| |||||||| |||||||| ||||| ||| ||| Sbjct 3523 ATGAGTTGGAAGGTTGGCTGCGGGAAAAAATGAAGACGCTGTCGCGCCACTCCGAGCTGG 3464 Query 16964 CGAA 16967 |||| Sbjct 3463 CGAA 3460 Score = 172 bits (190), Expect = 2e-38 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 17053 GAAAATGCCCTGCGGGCGGTCAGTCTGGGTCGTAAAAACTTCCTGTTCTTCGGCTCTGAT 17112 ||||||||||||||| |||||||||||| || || |||||| ||||||||||||| ||| Sbjct 3462 GAAAATGCCCTGCGGATGGTCAGTCTGGGGCGAAAGAACTTCTTGTTCTTCGGCTCCGAT 3403 Query 17113 CATGGTGGTGAGCGGGGAGCGCTACTGTACAGCCTGATCGGGACGTGCAAACTGAATGAC 17172 || |||||||| || || || || ||||| | ||||||||||| ||| |||| | | Sbjct 3402 CACGGTGGTGAACGCGGTGCACTGTTGTACGGGCTGATCGGGACATGCCGGTTGAACGGC 3343 Query 17173 GTGGATCCAGAAAGCTACCTTCGCCATGTGCTTGGCGTCATAGCAGACTGGCCGGTCAAC 17232 ||||||||||| | || || | || | || || || || ||||||||||| ||| Sbjct 3342 GTGGATCCAGAGCGTTATCTGCAGCACATACTGAATGTGATCGCCGACTGGCCGGTAAAC 3283 Query 17233 CGGGTCAGCGAACTGCTTCCGTGGCGCATAGCACTGCCAGCTGAATAA 17280 || || |||| || || |||||||| || | |||||| | |||||| Sbjct 3282 CGAGTTGGCGATCTCCTACCGTGGCGAGTAACCCTGCCAACAGAATAA 3235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 198720975792808