Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq615 127 2e-24 seq3560 93.3 4e-14 >seq615 Length=2534639 Score = 127 bits (140), Expect = 2e-24 Identities = 145/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 ||| ||||| ||||| || ||||||||||| || || || |||||||| |||||||| Sbjct 1867276 GTAAGTGTCTATGAGAAGAGAGTACATTTCCGAATGAACATTTTCCATGGCTATTTGAAA 1867335 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286 |||||||| |||| || || | || ||||||||| ||| || || |||||||| Sbjct 1867336 TCCGTAAAAACACCTTGCTTCTGGAATTTGAACTTCTTGACTGAATCGTTCCACCAGATT 1867395 Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346 |||||||||||| || || || |||||||| || | ||||| | |||||| || Sbjct 1867396 TTCGTTGACGATTCCATCCGATGCCGCGAAAAAAGCTAATACGTGAGATAAGAAATGTCG 1867455 Query 133347 CTCGTTGTCGTTCAA 133361 ||| | || ||||| Sbjct 1867456 CTCTTCTTCTTTCAA 1867470 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 132919 TCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTG 132978 ||||||| ||||| ||||||||| || ||||| || ||||| || || | ||||| Sbjct 1866954 TCGTCCCGCGAAATAAGTTCGTTGGAAAACGTCAAACCAGGCATAAGTCCTCTCTTTTTC 1867013 Query 132979 AGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCC 133038 ||||||||||| | || || ||||||||||| | || || || || || || || Sbjct 1867014 AGCCAAAATATTGAAGCAAATGATCCCGAAAAGAAAATTCCTTCTACTGCTGCAAATGCA 1867073 Query 133039 ACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCC 133098 |||| || || ||||| | || | || || ||||| ||| ||||| ||| Sbjct 1867074 ACCACACGTTCACCGAAACTTGCAGTATCACTTGCAATCCACTGCAATGCCCACGTAGCC 1867133 Query 133099 TTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAA 133136 || | | || ||||| | ||||| ||||| || || Sbjct 1867134 TTCTTTCGAACACACGGTAAGGTTTCAATGGCATTGAA 1867171 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/140 (74%), Gaps = 3/140 (2%) Strand=Plus/Plus Query 132547 CACTAAAAGTCCGCATCCAAAGTAAAG---GTGTCGTCCTTGGCAAACATCACGCCAAAT 132603 ||||||||||| ||||| || ||||| | || ||||||| |||||| ||| | Sbjct 1866420 CACTAAAAGTCTGCATCTAACGTAAATACAGAATCTTCCTTGGACGCCATCACACCACAC 1866479 Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 || ||||| || || || |||||||| || || || ||||||||||||| || || || Sbjct 1866480 TTCTGATACTCTCCAACTTTTTTCTCGAAGAAGTTCGTTTTTCCCTCCAGTGATATATGC 1866539 Query 132664 GTCATAAAATCCAAGGGGTT 132683 ||| || || ||||| || Sbjct 1866540 TCCATGAAGTCAAAGGGATT 1866559 >seq3560 Length=1522174 Score = 93.3 bits (102), Expect = 4e-14 Identities = 136/191 (71%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||||||||| || || || || || || |||||||| | || || ||| | | Sbjct 967207 ATGCAAATATTCGTTAAGACACTGACTGGAAAGACCATCACACTGGAAGTGGAGCCATCA 967266 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | |||| | |||||||| |||||||| || ||||| | |||||| Sbjct 967267 GACACTATTGAGAATGTTAAGGCAAAAATCCAGGACAAAGAAGGCATTCCACCAGACCAA 967326 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| | | || | || |||||||||||||| || | || || ||| || || ||| Sbjct 967327 CAGAGATTGATATTTGCTGGCAAACAGCTGGAAGATGGCCGTACACTCTCTGATTATAAC 967386 Query 38424 ATCCA-AAAGG 38433 || || ||||| Sbjct 967387 ATTCAGAAAGG 967397 Score = 84.2 bits (92), Expect = 2e-11 Identities = 134/190 (71%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||||||||| || || || || || || ||||| ||||| | || || || | | Sbjct 965684 AATGCAAATATTTGTTAAGACTCTGACTGGAAAAACTATCACTTTGGAAGTGGAACCGTC 965743 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | || | || |||| || || || || ||||| |||||| Sbjct 965744 AGACACCATTGAGAACG-TCAAGGCCAAGATCCAAGATAAGGAAGGCATTCCTCCCGACC 965802 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||| | | || | ||| |||||||||||||| || | | ||||| || || | Sbjct 965803 AACAGAGATTGATCTTCGCTGGCAAACAGCTGGAAGATGGCAGAACCCTTTCAGATTATA 965862 Query 38422 ACATCCAAAA 38431 |||||||||| Sbjct 965863 ACATCCAAAA 965872 Score = 82.4 bits (90), Expect = 8e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| ||||| || ||||| ||||| || ||| | || || || | | Sbjct 965989 AATGCAGATCTTCGTCAAAACTCTTACGGGAAAAACTATTACCCTTGAAGTGGAACCATC 966048 Query 38303 CGACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | ||||| |||| | ||| |||| ||||| || || ||||| | |||| Sbjct 966049 AGACACTATTGAAAACG-TTAAGGCAAAGATCCAGGACAAGGAAGGCATTCCACCTGACC 966107 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||| | | || | || || ||||||||||| || | | || || || || | Sbjct 966108 AGCAGAGATTGATCTTTGCTGGTAAACAGCTGGAGGATGGCAGAACTCTTTCTGATTATA 966167 Query 38422 ACATCCAAAAGG 38433 |||||||||||| Sbjct 966168 ACATCCAAAAGG 966179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500109240541440