Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq7813 246 2e-59 seq397 187 2e-41 seq7248 141 7e-28 seq1538 104 2e-16 >seq7813 Length=436614 Score = 246 bits (272), Expect = 2e-59 Identities = 613/910 (67%), Gaps = 28/910 (3%) Strand=Plus/Minus Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318 ||||| ||||| ||||||||||| ||||| | || || || ||||||||||||||||| Sbjct 239103 GCAGTGACATTCAGAATACCATTTGCATCAATGTCGAAAGTCACTTCAATTTGAGGGACG 239044 Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378 || || ||||||||||||| || | | ||| | || || || |||||||| Sbjct 239043 CCCCTGGGAGCAGGTGGGATTCCAGTGAGTTCGAATTTGCCAAGCAAGTTGTTATCTTTG 238984 Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 517438 || || | ||| || || || | || || ||| | | ||||| || ||||| Sbjct 238983 GTCAAAGCCCTTTCCCCTTCAAACACCTGAATCAAGACTCCTGGCTGATTGTCAGAATAG 238924 Query 517439 GTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 517497 ||||| || | |||| | | || ||||| ||||||||||| | ||| | || Sbjct 238923 GTTGTGAA-AGTCTGAGTCTGCTTTGTGGGAATAGTTGTGTTTCTCTTAATCAAGGCAGT 238865 Query 517498 CATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATC-AACTAGGACAA 517556 ||| | ||||| || || |||| ||||||||| ||||| | ||||| ||| | |||| Sbjct 238864 CATTACTCCACCAGCAGTCTCTATACCAAGAGACAGAGGGGCAACATCCAACAACAACAA 238805 Query 517557 TATTTTGAAGTTTTTCATCAG-TTTGAC--CAACAAGAATAGCTGCTTGAATAGCAGCAC 517613 | |||| || | |||| |||| | || ||||| || ||||| | ||||| | Sbjct 238804 G-TCCTGAACTT---CCTCAGATTTGTCTCCATGGAGAATGGCAGCTTGCACTGCAGCCC 238749 Query 517614 CATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT 517673 ||||||||||||||||||||||||| | | | ||| | || ||||||||||| |||| Sbjct 238748 CATATGCAACAGCTTCATCAGGATTGATTGACTTATTCAATTCCTTACCATTGAAGAAAT 238689 Query 517674 TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCAT 517733 ||| || | | ||| ||||| || | | ||| |||||||| || || || |||| Sbjct 238688 CCTGAAGTAGCTTTTGTACTTTAGGGATTCTGGTTGAACCTCCAACCAAAACTATGTCAT 238629 Query 517734 GCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCG 517793 | | || ||| |||| |||| |||| | ||||||| || || || | | Sbjct 238628 GTATTTGCCCTTTGTCCATCTTTGCATCCCTAAGTGCTTTTTCCACTGGCTCCA-TTGTG 238570 Query 517794 CT-CTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAA--GA-GTGACATTA 517849 || | || | || | | | ||| || || | || | ||||| || ||| || Sbjct 238569 CTACGGAAAAGATCAGCATTCAATTCCTCAAACCTTGCACGAGTAATGGATGTG----TA 238514 Query 517850 TAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAG 517908 || ||||| |||||| |||| ||||| | |||||| | | |||||| || ||||| || Sbjct 238513 GAAGTCAATACCTTCGTACAAGGAATCTATTTCAATAGATGCTTGAGTAGATGAAGAAAG 238454 Query 517909 TGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATT-GAT 517967 | | ||| | | ||||| || || | | | || | ||| || | ||| | | Sbjct 238453 GGTTCTTTTGGATCTCTCACAAGCAGTACGCAAGCGCCGCACAGCTCTT--TTATTAGCT 238396 Query 517968 -TCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGAT 518024 |||||||| ||||||| || |||||||| |||| |||| | ||| | || | | || Sbjct 238395 GTCAAATCTTTTTTATACTTCCTCTTGAACTCTTGAACAAA--ATGGTTCACCATTCTAT 238338 Query 518025 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 518084 | ||||| ||||| || || | | |||| ||| | || | | |||| |||| | Sbjct 238337 TGTCAAAGTCTTCCCCACCAAGATGGGTATCTCCAGCAGTTGACTTGACTTCAAAAATAC 238278 Query 518085 CATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 518144 ||||||||| | | | || ||| ||| || || || || | ||||| || || | Sbjct 238277 CATCTTCAATTGTTAGTATAGATACGTCAAAAGTGCCTCCTCCAAGGTCAAATATGAGGA 238218 Query 518145 CATTCATTTC 518154 |||| |||| Sbjct 238217 CATTTCTTTC 238208 Score = 163 bits (180), Expect = 2e-34 Identities = 167/218 (77%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 |||||||| || ||||| |||| ||||| || ||||||||||| || || | ||||||| Sbjct 237460 TTTTTATCTAGGCCATAGGCAATTGCAGCTGCTGTTGGTTCATTGATTATCCGCAAAACA 237401 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 |||||||| | |||| ||| |||||||| || ||||| || ||||| || ||||||||| Sbjct 237400 TTAAGACCTGAAATTGCTCCAGCATCTTTTGTAGCTTGCCTCTGTGAGTCATTAAAATAT 237341 Query 518285 GCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGT 518344 ||||| ||||| | ||| ||||| | || || || | ||| || ||| |||| Sbjct 237340 GCAGGTACAGTCACAACAGCATCTGCAACAGTCTTCCCTAGATATGCTTCTGCAGTTTCC 237281 Query 518345 TTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG 518382 ||||||||||| | || |||||| ||||| ||| || Sbjct 237280 TTCATTTTACTGAGAACCATTGAACTAATTTCTTCAGG 237243 Score = 102 bits (112), Expect = 6e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582 |||||||||| || | ||||| || || |||||| || |||||||| ||||| | Sbjct 236698 CAAAAATAGTGTTATTGGGATTCATAGCTACTTGATTCTTAGCTGCATCACCAATTAATC 236639 Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642 ||| || ||||| || | ||||| || ||||| | ||| ||||||||||| || | Sbjct 236638 TTTCGGTGTCTGTGAAGGCTACATAGCTCGGGGTTGTTCTATTTCCTTGATCATTAGCTA 236579 Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702 | |||||||| || |||| || | || || || ||| | | || || || | ||||| Sbjct 236578 TTATTTCAACCTTTCCATGCTGAAAAACTCCAACGCAAGAATAGGTAGTACCAAGATCAA 236519 Query 518703 TACCAATAGCA 518713 | |||| |||| Sbjct 236518 TTCCAACAGCA 236508 >seq397 Length=387284 Score = 187 bits (206), Expect = 2e-41 Identities = 588/901 (65%), Gaps = 10/901 (1%) Strand=Plus/Minus Query 517244 GTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACT 517303 || || |||||| || || ||||| | ||||| ||||| || | ||| || || ||| Sbjct 67784 GTAGACTTATCAATAGCCGTGACATTCAAGATACCGTTGGCGTCGATATCGAAGGTAACT 67725 Query 517304 TCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGA 517363 || |||||||| || |||| | || || || || || | | || | |||| | Sbjct 67724 TCGATTTGAGGAACTCCTCGAGGTGCCGGAGGAATGCCGGTAAGCTCGAACTTGCCCAAA 67665 Query 517364 TTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTT 517423 || |||||||| || | | || || || ||| | | |||||| || | | Sbjct 67664 AGGTTGTTATCTTTGGTCATGGTACGCTCTCCTTCGTACACTTGGATCAACACACCTGGC 67605 Query 517424 TGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAA-GGAATTGTTGTGTTTCT 517482 || || || || || || || || |||| | | | | ||||| || ||||||| Sbjct 67604 TGGTTGTCGGAGTAGGTGGTGAAGG-TCTGAGTCTGCTTCGTTGGAATGGTGGTGTTTCG 67546 Query 517483 ATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGAC 517542 | || | ||||| | ||||| || || || | |||||| |||||||||||||| Sbjct 67545 CTTGATGAGCGCAGTCATGACGCCACCAGCCGTCTCGATACCAAGGGAAAGAGGAGTGAC 67486 Query 517543 ATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTG 517602 ||||| |||| || || ||| | |||| | | || ||||||||| || || Sbjct 67485 ATCAAGGAGGAGAAGATCTTGTACAGCTTCAGACTTATCGCCGTGAAGAATAGCAGCCTG 67426 Query 517603 AATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACC 517662 | |||||| || || || ||||||||||| || || | | | || |||| || || Sbjct 67425 GACAGCAGCTCCGTAAGCCACAGCTTCATCGGGGTTGATGGACTTGTTAAGTTCCTTGCC 67366 Query 517663 ATTGAAAAAAT-TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTA 517721 ||||| |||| ||| || | || | | |||||||||||| | || ||||| || | Sbjct 67365 GTTGAAGAAATCTTGCAACAGCTTCTGG-ATCTTAGGAATACGGGTGGAACCTCCGACGA 67307 Query 517722 ATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGG 517781 || || || || | || || || |||| || | ||| | | ||| ||||| | Sbjct 67306 GAACGATGTCGTGGATTTGAGACTTGTCCATCTTGGCATCTCGGAGAGATTTCTCAACTG 67247 Query 517782 GTTCAAGACCCGCT-CTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGA 517840 |||| | | ||| | |||| || | |||||||| || | || || || | Sbjct 67246 GTTCCA-AGGTGCTGCGGAACAGATCGGCGTTCAGTTCTTCAAACCTGGCCCTGGTGATG 67188 Query 517841 GTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAA 517900 | | || ||||||||||||||||||||| ||||| | ||||| | | ||| || ||| Sbjct 67187 GAGGTATAATAATCAATTCCTTCGAACAAGGAATCGATCTCAATACTGGCTTGGGTGGAA 67128 Query 517901 GAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCT--TTTG 517958 || || | | ||| || || | |||||||| || || ||||||| | ||| ||| Sbjct 67127 GAGGACAAGGTACGCTTTGCCCTCTCACATGCAGTTCTCAGTCTTCTAACAGCTCGCTTG 67068 Query 517959 CTGATTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAA 518018 | | || | | ||| |||| || || |||||||| |||| || | | || | Sbjct 67067 TT--TGGAGTGAGATCCTTTTTGTACTTCCTCTTGAACTCTTGCACGAAGTGGTTAACCA 67010 Query 518019 GACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGA 518078 | ||||| || || || |||||||| | || | ||| | || | | |||| | Sbjct 67009 TCCTGTTATCGAAGTCCTCTCCTCCCAAGTGGGTGTCTCCAGCGGTGGACTTGACTTCAA 66950 Query 518079 AAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAA 518138 | | |||||||| | | || || | |||||| || |||||||||| ||| || | Sbjct 66949 AGATGCCATCTTCGATGGTCAGAATGGAGACATCAAAAGTGCCACCACCCAGATCGAAGA 66890 Query 518139 T 518139 | Sbjct 66889 T 66889 Score = 98.7 bits (108), Expect = 8e-15 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 518540 GGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAAT 518599 ||||| || || |||||| ||| || ||||||||||| || |||| || || || || Sbjct 66202 GGATTCATGGCCACTTGATTTTTCGCGGCATCTCCAATTAGCCGTTCGGTGTCCGTGAAC 66143 Query 518600 GAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCA 518659 | ||||| ||||| || | |||||||| ||||| || || ||||| |||||||| Sbjct 66142 GCCACATAACTGGGAGTGGTCCTGTTACCTTGGTCATTGGCGATGATTTCCACTTTACCG 66083 Query 518660 TTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACC 518706 | ||| ||||||| || || |||| || || || |||||||| Sbjct 66082 TGTTGGAATACACCCACGCACGAGTAAGTGGTGCCCAAGTCAATACC 66036 >seq7248 Length=358010 Score = 141 bits (156), Expect = 7e-28 Identities = 150/197 (76%), Gaps = 3/197 (2%) Strand=Plus/Minus Query 518117 GTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGA 518176 || |||||||| | |||||| | || |||||| |||| | ||| | ||||| ||| Sbjct 29770 GTGCCACCACCAAGATCAAACACCAGAACATTCTTTTC---GCCTTCTCTCTTATCCAGA 29714 Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236 ||||| |||| ||||||||||||||||| ||||| || |||| ||| | ||| |||| | Sbjct 29713 CCATATGCAATCGCAGCAGCAGTTGGTTCGTTAATTATCCTCATAACCTGAAGTCCAGAA 29654 Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296 ||| | |||||||| || || ||||| | |||| |||||| ||||| || || ||||| Sbjct 29653 ATTGTACCTGCATCCTTCGTAGCTTGACGCTGTGCATCGTTGAAATAAGCTGGGACAGTG 29594 Query 518297 ATAACGGCATCAGTTAC 518313 | || |||| ||| || Sbjct 29593 ACGACAGCATGAGTGAC 29577 Score = 91.5 bits (100), Expect = 1e-12 Identities = 132/183 (72%), Gaps = 5/183 (3%) Strand=Plus/Minus Query 518498 TCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGC-AGCTTG 518556 || || ||||| | |||||| |||||||| | ||||| ||| || | | |||| | Sbjct 29154 TCCCTCCCAATAAGTCGTTTGGCATCAAATACCGTATTCTCTGGGTTCGTGGTGAGCT-G 29096 Query 518557 ATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTC---TGTAAATGAAACATATGATGG 518613 || || || || || ||||| ||| | || || |||||| | || || ||||| Sbjct 29095 ATTCTTAGCCGCGTCACCAATGAGACGCTCGCCGTCCGGTGTAAAAGCCACGTAAGATGG 29036 Query 518614 AGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACC 518673 |||| |||||||||||||||| || || || |||||||| ||| |||| ||||||| Sbjct 29035 AGTTATGCGATTACCTTGATCGTTAGCGATGATTTCAACCCGACCGTTTTTATATACACC 28976 Query 518674 TAC 518676 ||| Sbjct 28975 TAC 28973 >seq1538 Length=1185135 Score = 104 bits (114), Expect = 2e-16 Identities = 99/127 (78%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 635439 AATGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTA 635498 ||||||| ||||| ||||||||||||||||||| ||| |||| ||| | ||||| || Sbjct 152664 AATGTACATTAATTCTGACAGAGGGAGATTCAGCCAAATCATTGGCTGTCTCTGGGCTGG 152605 Query 635499 ATGTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTA 635558 ||| ||||||||||| | ||||| ||||| ||| | || || ||||| | ||||| | Sbjct 152604 GTGTCATTGGAAGAGACAAGTATGGTGTTTTTCCATTAAGGGGTAAACTGCTTAATGTGA 152545 Query 635559 GGGATGC 635565 | || || Sbjct 152544 GAGAAGC 152538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780317929593196