Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq7813 333 3e-86 seq397 257 2e-63 >seq7813 Length=436614 Score = 333 bits (368), Expect = 3e-86 Identities = 694/1028 (68%), Gaps = 28/1028 (3%) Strand=Plus/Minus Query 6565 CTTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTT 6624 ||| |||||||| |||| ||||| || |||||| |||||| |||||||||| ||||| Sbjct 239227 CTTCTCATCTTCCGCTTTGTACTTCTCTGCATCTGACACCATCCTTTCAATGTCCTCTTT 239168 Query 6625 CGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGAT----TTACCCGAGGCCT 6680 | | ||||||||||| || || || || |||| | || || || | || Sbjct 239167 GCTGAGACGACCCTTATCATTAGTTATGGTGAT----TCGGTTCTCCTTGCCAGAAGACT 239112 Query 6681 TATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTT 6740 | || |||| | ||||||| ||||||||||||||||| ||||| | || | ||||| Sbjct 239111 TTTCAATAGCAGTGACATTCAGAATACCATTTGCATCAATGTCGAAAGTCACTTCAATTT 239052 Query 6741 GTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGT 6800 | || ||||| || || | ||| || || || | || ||| | ||||| || ||| Sbjct 239051 GAGGGACGCCCCTGGGAGCAGGTGGGATTCCAGTGAGTTCGAATTTGCCAAGCAAGTTGT 238992 Query 6801 TATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTAT 6860 |||| | | | | ||| |||||| | || | ||| || | || ||||| | Sbjct 238991 TATCTTTGGTCAAAGCCCTTTCCCCTTCAAACACCTGAATCAAGACTCCTGGCTGATTGT 238932 Query 6861 CTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAA 6920 | |||| ||| | || | ||| | ||||| || || |||||| ||| | Sbjct 238931 CAGAATAGGTTGTGAAAGTCTGAGTCTGCTTTGTGGGAATAGTTGTGTTTCTCTTAATCA 238872 Query 6921 CCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGA 6980 | ||||| | ||||| ||| || | |||||||||||||| | || ||||| | Sbjct 238871 AGGCAGTCATTACTCCACCAGCAGTCTCTATACCAAGAGACAGAGGGGCAACATCCAACA 238812 Query 6981 GTAACAGGTCTTGAAC------AGATTCGTTCCCTTCACCCGTTAAGA-TGGCGGCTTGG 7033 |||| ||| ||||| ||||| || || || | ||| |||| ||||| Sbjct 238811 ACAACAAGTCCTGAACTTCCTCAGATTTGT---CTCCA----TGGAGAATGGCAGCTTGC 238759 Query 7034 ACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCG 7093 || | ||||| ||||| || || ||||| || || || | ||||||| ||| ||||| Sbjct 238758 ACTGCAGCCCCATATGCAACAGCTTCATCAGGATTGATTGACTTATTCAATTCCTTACCA 238699 Query 7094 TTAAAATAATCC-GA--TAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACC 7150 || || ||||| || || | ||||| | ||| ||||||| || || || || ||| Sbjct 238698 TTGAAGAAATCCTGAAGTAGCTTTTGT---ACTTTAGGGATTCTGGTTGAACCTCCAACC 238642 Query 7151 AAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACA 7210 ||||| || |||| | || | ||| || ||||||| || | ||||| |||||| || Sbjct 238641 AAAACTATGTCATGTATTTGCCCTTTGTCCATCTTTGCATCCCTAAGTGCTTTTTCCACT 238582 Query 7211 GGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATG 7270 || ||||| ||||||| | || | || ||||||||| | |||||| |||||| Sbjct 238581 GGCTCCATTGTGCTACGGAAAAGATCAGCATTCAATTCCTCAAACCTTGCACGAGTAATG 238522 Query 7271 GATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTC 7330 ||||| ||||| |||| || ||||| || ||||| |||||||| | || ||| | | Sbjct 238521 GATGTGTAGAAGTCAATACCTTCGTACAAGGAATCTATTTCAATAGATGCTTGAGTAGAT 238462 Query 7331 GAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGG 7390 ||||| | |||| || | | |||||| || || || || || || | || | Sbjct 238461 GAAGAAAGGGTTCTTTTGGATCTCTCACAAGCAGTACGCAAGCGCCGCACAGCTCTTTTA 238402 Query 7391 TTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGT 7450 ||| | | | |||||| |||| || | || ||||||| | || || | | | Sbjct 238401 TTAGCTGTCAAATCTTTTTTATACTTCCTCTTGAACTCTTGAACAAAATGGTTCACCATT 238342 Query 7451 CTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAG 7510 || || || ||||| ||||| | || ||||| || || || | ||||||||||| Sbjct 238341 CTATTGTCAAAGTCTTCCCCACCAAGATGGGTATCTCCAGCAGTTGACTTGACTTCAAAA 238282 Query 7511 ATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATG 7570 ||||| ||||||| ||| | || || ||||| || || || || |||||||| ||| Sbjct 238281 ATACCATCTTCAATTGTTAGTATAGATACGTCAAAAGTGCCTCCTCCAAGGTCAAATATG 238222 Query 7571 AGTACGTT 7578 || || || Sbjct 238221 AGGACATT 238214 Score = 102 bits (112), Expect = 1e-16 Identities = 155/218 (71%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACG-AAGACA 7653 || ||||| || || || || || || || || ||||||||||| || || || || ||| Sbjct 237460 TTTTTATCTAGGCCATAGGCAATTGCAGCTGCTGTTGGTTCATTGATTATCCGCAAAACA 237401 Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713 || || || | ||| | | | |||||||| || ||||| | || || || ||||| || Sbjct 237400 -TTAAGACCTGAAATTGCTCCAGCATCTTTTGTAGCTTGCCTCTGTGAGTCATTAAAATA 237342 Query 7714 GGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATC 7773 || || || || || || || || | || |||| || ||||| | ||| || | || Sbjct 237341 TGCAGGTACAGTCACAACAGCATCTGCAACAGTCTTCCCTAGATATGCTTCTGCAGTTTC 237282 Query 7774 TTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAG 7811 |||||||| | |||||||| || ||| ||||||| Sbjct 237281 CTTCATTTTACTGAGAACCATTGAACTAATTTCTTCAG 237244 >seq397 Length=387284 Score = 257 bits (284), Expect = 2e-63 Identities = 690/1045 (66%), Gaps = 10/1045 (1%) Strand=Plus/Minus Query 6539 TTCTTCGCCTCGACCTTTTTCGCGTACTTTTCATCTTCATCTTTATACTTTTCCGCATCT 6598 ||||| |||| |||| | | | ||| ||||| ||| | || || | || ||||| Sbjct 67919 TTCTTGGCCTGCACCTGCTGCCGCTGCTTCTCATCCTCAGCCTTGTATCTCTCGGCATCG 67860 Query 6599 TGGACCATCTTTTCAATGTCTTCTTTCGATAATC-TCCCCTTATCATTCGTAATCGTAAT 6657 | |||||| | ||||| ||||| || | ||| | | ||||| || || || || || || Sbjct 67859 TTCACCATCCTCTCAATCTCTTCCTT-GCTAAGCCTACCCTTGTCGTTGGTGATGGTTAT 67801 Query 6658 CTT-TTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCAT 6716 ||| ||| ||| || | | |||||| ||| | |||||||| ||||| || || | Sbjct 67800 CTTATTCTCCTTT-CCGGTAGACTTATCAATAGCCGTGACATTCAAGATACCGTTGGCGT 67742 Query 6717 CAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCG--GTGCGGCTGGAATACCCGT 6774 | | |||||| | || | ||||| || || ||||| |||| | ||||| || || Sbjct 67741 CGATATCGAAGGTAACTTCGATTTGAGGA--ACTCCTCGAGGTGCCGGAGGAATGCCGGT 67684 Query 6775 TAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGAC 6834 | || || | || | | ||||||| | | | | |||| || ||||| || || Sbjct 67683 AAGCTCGAACTTGCCCAAAAGGTTGTTATCTTTGGTCATGGTACGCTCTCCTTCGTACAC 67624 Query 6835 TTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGA 6894 || || ||| | || || || || || | |||| | || | ||| | Sbjct 67623 TTGGATCAACACACCTGGCTGGTTGTCGGAGTAGGTGGTGAAGGTCTGAGTCTGCTTCGT 67564 Query 6895 TGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCC 6954 |||||| || || |||| | || | || ||||| | ||||| || |||| || Sbjct 67563 TGGAATGGTGGTGTTTCGCTTGATGAGCGCAGTCATGACGCCACCAGCCGTCTCGATACC 67504 Query 6955 AAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACC 7014 ||| || ||||| || || || | ||| | || ||||| |||| ||| | || || Sbjct 67503 AAGGGAAAGAGGAGTGACATCAAGGAGGAGAAGATCTTGTACAGCTTCAGACTTATCGCC 67444 Query 7015 CGTTAAGA-TGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCG 7073 || |||| | || || ||||| | || ||||| || || || ||||||||||| || | Sbjct 67443 -GTGAAGAATAGCAGCCTGGACAGCAGCTCCGTAAGCCACAGCTTCATCGGGGTTGATGG 67385 Query 7074 TTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTC 7133 || || ||||| || ||||| || |||| |||| | || || || || || | Sbjct 67384 ACTTGTTAAGTTCCTTGCCGTTGAAGAAATCTTGCAACAGCTTCTGGATCTTAGGAATAC 67325 Query 7134 GTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTC 7193 | || || || ||||| | |||||| || | | || || || || ||||| | |||| Sbjct 67324 GGGTGGAACCTCCGACGAGAACGATGTCGTGGATTTGAGACTTGTCCATCTTGGCATCTC 67265 Query 7194 GAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAA 7253 | || | ||| || || ||||||| | ||||||| || |||||| |||| Sbjct 67264 GGAGAGATTTCTCAACTGGTTCCAAGGTGCTGCGGAACAGATCGGCGTTCAGTTCTTCAA 67205 Query 7254 AACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAA 7313 | | || | ||| ||||| ||||| |||||| || ||| | || ||||| || |||| Sbjct 67204 ACCTGGCCCTGGTGATGGAGGTATAATAATCAATTCCTTCGAACAAGGAATCGATCTCAA 67145 Query 7314 TGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAAC 7373 | | | ||| | | || || || || |||||||| | |||||| || |||| | | Sbjct 67144 TACTGGCTTGGGTGGAAGAGGACAAGGTACGCTTTGCCCTCTCACATGCAGTTCTCAGTC 67085 Query 7374 GACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAG 7433 | || || ||| ||| | | ||| || || | || | || ||||||| Sbjct 67084 TTCTAACAGCTCGCTTGTTTGGAGTGAGATCCTTTTTGTACTTCCTCTTGAACTCTTGCA 67025 Query 7434 AGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGG 7493 |||||| || | || |||||| || || || |||||||| || || || |||| Sbjct 67024 CGAAGTGGTTAACCATCCTGTTATCGAAGTCCTCTCCTCCCAAGTGGGTGTCTCCAGCGG 66965 Query 7494 TCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCAC 7553 | | |||||||||||||| || |||| ||| | | | || |||||||| || |||| Sbjct 66964 TGGACTTGACTTCAAAGATGCCATCTTCGATGGTCAGAATGGAGACATCAAAAGTGCCAC 66905 Query 7554 CACCCAGGTCAAAAATGAGTACGTT 7578 ||||||| || || || | ||||| Sbjct 66904 CACCCAGATCGAAGATCAAAACGTT 66880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635052090499440