Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1460 163 6e-35 seq3560 159 8e-34 seq7337 122 2e-22 >seq1460 Length=1689650 Score = 163 bits (180), Expect = 6e-35 Identities = 150/190 (79%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010 |||| || ||||||||||| | |||||||||||||||||| || ||||| || ||||| | Sbjct 1136601 CTTTCTGGATATTGTAATCTGAAAGAGTTCTCCCATCTTCAAGTTGCTTTCCAGCGAAAA 1136660 Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCT 195070 |||| | ||| ||||| || ||||| |||||||| || |||||||| ||| || || | Sbjct 1136661 TAAGCCTTTGCTGGTCAGGTGGAATTCCTTCTTTATCCTGAATTTTAGCCTTCACATTTT 1136720 Query 195071 CAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGA 195130 |||||||||||| || || |||||||| | ||| || || || || |||||||||| Sbjct 1136721 CAATGGTGTCCGCTGGCTCAACCTCAAGGGTTATCGTTTTACCCGTTAAGGTTTTTACGA 1136780 Query 195131 ACACTTGCAT 195140 | | ||||| Sbjct 1136781 AAATCTGCAT 1136790 >seq3560 Length=1522174 Score = 159 bits (176), Expect = 8e-34 Identities = 150/191 (79%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010 ||||||| || || ||||| | ||| ||||| |||||||| ||||| || || ||||||| Sbjct 965874 CTTTTTGGATGTTATAATCTGAAAGGGTTCTGCCATCTTCCAGCTGTTTGCCAGCGAAGA 965815 Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCT 195070 | | || |||||||| |||||||||||||| || ||||| || || ||||||||||| Sbjct 965814 TCAATCTCTGTTGGTCGGGAGGAATGCCTTCCTTATCTTGGATCTTGGCCTTGACGTTCT 965755 Query 195071 CAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGA 195130 |||||||||| || ||||||||| | || | || ||||| |||| ||| || || | Sbjct 965754 CAATGGTGTCTGACGGTTCCACTTCCAAAGTGATAGTTTTTCCAGTCAGAGTCTTAACAA 965695 Query 195131 ACACTTGCATT 195141 | | ||||||| Sbjct 965694 ATATTTGCATT 965684 Score = 156 bits (172), Expect = 9e-33 Identities = 148/189 (78%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 ||||| || || ||||| | ||||||||| ||||| || ||||| ||||| || ||||| Sbjct 966177 TTTTGGATGTTATAATCAGAAAGAGTTCTGCCATCCTCCAGCTGTTTACCAGCAAAGATC 966118 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 | || || ||||| || ||||||||||| ||||| || || ||| ||| ||||| ||| Sbjct 966117 AATCTCTGCTGGTCAGGTGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTAACGTTTTCA 966058 Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAAC 195132 || ||||| || ||||||||||||||||| || ||||| || | |||||| ||||| Sbjct 966057 ATAGTGTCTGATGGTTCCACTTCAAGGGTAATAGTTTTTCCCGTAAGAGTTTTGACGAAG 965998 Query 195133 ACTTGCATT 195141 | |||||| Sbjct 965997 ATCTGCATT 965989 Score = 145 bits (160), Expect = 2e-29 Identities = 146/190 (77%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010 |||| || || |||||||| | || |||| ||||| || ||||| ||||| || |||| Sbjct 967962 CTTTCTGGATGTTGTAATCTGAGAGTGTTCGGCCATCCTCCAGCTGTTTACCAGCAAAGA 967903 Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCT 195070 | | || || ||||| || ||||||||||| ||||| || |||||| ||| || |||| Sbjct 967902 TCAATCTCTGCTGGTCAGGTGGAATGCCTTCCTTGTCCTGGATTTTTGCCTTAACATTCT 967843 Query 195071 CAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGA 195130 |||||||||| ||| ||||||||| || |||| |||||||| || | || || || | Sbjct 967842 CAATGGTGTCTGAAGGTTCCACTTCCAGAGTAATTGTCTTTCCAGTGAGTGTCTTGACAA 967783 Query 195131 ACACTTGCAT 195140 | | |||||| Sbjct 967782 AGATTTGCAT 967773 Score = 141 bits (156), Expect = 2e-28 Identities = 146/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010 |||||||||| |||||||| | || |||| |||||||| |||||||| ||||| |||| Sbjct 971179 CTTTTTGAATGTTGTAATCAGAGAGGGTTCGGCCATCTTCAAGCTGCTTTCCTGCAAAGA 971120 Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCT 195070 | | | |||||||| || ||||| ||||| |||||||| || || ||| ||||||| Sbjct 971119 TCAACCTCTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGCCTTCACGTTCT 971060 Query 195071 CAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGA 195130 |||| ||||| || ||||||||||| || | || || ||||| | || || |||| Sbjct 971059 CAATAGTGTCTGACGGCTCCACTTCAAGAGTTATAGTTTTCCCTGTAAGTGTCTTAACGA 971000 Query 195131 ACACTTGCATT 195141 | | |||||| Sbjct 970999 AGATCTGCATT 970989 Score = 140 bits (154), Expect = 7e-28 Identities = 145/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010 |||| ||||| || ||||| | || || | |||||||| ||||| || || || || | Sbjct 967396 CTTTCTGAATGTTATAATCAGAGAGTGTACGGCCATCTTCCAGCTGTTTGCCAGCAAATA 967337 Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCT 195070 | | || ||||||||||| ||||||||||||||||| || |||||| ||| || |||| Sbjct 967336 TCAATCTCTGTTGGTCTGGTGGAATGCCTTCTTTGTCCTGGATTTTTGCCTTAACATTCT 967277 Query 195071 CAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGA 195130 |||| ||||| || |||||||| || || | |||||||| |||| || || |||| Sbjct 967276 CAATAGTGTCTGATGGCTCCACTTCCAGTGTGATGGTCTTTCCAGTCAGTGTCTTAACGA 967217 Query 195131 ACACTTGCAT 195140 | | |||||| Sbjct 967216 ATATTTGCAT 967207 Score = 140 bits (154), Expect = 7e-28 Identities = 145/189 (77%), Gaps = 1/189 (1%) Strand=Plus/Minus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || ||||| |||||||| | || |||| ||||| || ||||| ||||| || ||||| Sbjct 973148 TTCTGAATGTTGTAATCTGAGAGTGTTCGGCCATCCTCCAGCTGTTTACCAGCAAAGATC 973089 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 | || || ||||| || ||||||||||| |||||||| | | || ||| || |||||| Sbjct 973088 AATCTCTGCTGGTCAGGTGGAATGCCTTCCTTGTCTTGGA-TCTTGCCTTAACATTCTCA 973030 Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAAC 195132 || || || || ||||||||||||||||| || ||||| || | |||||| ||||| Sbjct 973029 ATCGTATCTGATGGTTCCACTTCAAGGGTAATAGTTTTTCCCGTAAGAGTTTTGACGAAG 972970 Query 195133 ACTTGCATT 195141 | |||||| Sbjct 972969 ATCTGCATT 972961 Score = 138 bits (152), Expect = 3e-27 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010 |||||||||| |||||||| | || || | ||||| || | |||||| ||||| |||| Sbjct 971483 CTTTTTGAATGTTGTAATCAGAGAGGGTACGACCATCCTCCAACTGCTTTCCTGCAAAGA 971424 Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCT 195070 | | || || ||||| ||||||||||| ||||| || || || || ||| ||||||| Sbjct 971423 TCAATCTCTGCTGGTCAGGAGGAATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTCT 971364 Query 195071 CAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGA 195130 |||| ||||| || |||||||||||| || | || || ||||| | || || |||| Sbjct 971363 CAATAGTGTCTGACGGTTCCACTTCAAGAGTTATAGTTTTCCCTGTAAGTGTCTTGACGA 971304 Query 195131 ACACTTGCATT 195141 | | ||||||| Sbjct 971303 AAATTTGCATT 971293 Score = 118 bits (130), Expect = 2e-21 Identities = 140/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010 |||||||||| ||||| || | ||| || | |||||||| | ||||| || || || | Sbjct 965578 CTTTTTGAATGTTGTAGTCTGAAAGTGTGCGGCCATCTTCTAATTGCTTTCCAGCAAAAA 965519 Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCT 195070 | |||| |||||||| || || || || || || ||||||||||| ||| || || | Sbjct 965518 TCAGTCTCTGTTGGTCGGGCGGGATTCCCTCCTTATCTTGAATTTTAGCCTTCACATTTT 965459 Query 195071 CAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGA 195130 |||| || || ||| || ||||| ||||||| ||||| ||||| | || || |||| Sbjct 965458 CAATTGTATCAGAAGGCTCAACTTCGAGGGTAATAGTCTTCCCTGTAAGGGTCTTGACGA 965399 Query 195131 ACACTTGCAT 195140 | | ||||| Sbjct 965398 AGATCTGCAT 965389 Score = 116 bits (128), Expect = 8e-21 Identities = 115/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || || || |||||||| | ||||| | ||||||||| |||||||| || || ||||| Sbjct 969118 TTCTGTATGTTGTAATCAGAGAGAGTGCGCCCATCTTCCAGCTGCTTTCCAGCAAAGATC 969059 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 | || || ||||| || ||||||||||| ||||| || || || ||| ||||||||| Sbjct 969058 AATCTCTGCTGGTCAGGTGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTAACGTTCTCA 968999 Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 || || || || |||||||||||| || Sbjct 968998 ATCGTATCTGATGGTTCCACTTCAAGAGT 968970 >seq7337 Length=451322 Score = 122 bits (134), Expect = 2e-22 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012 || || |||||||| || | || || | |||||||| | ||| || || ||||| || Sbjct 238497 TTCTGGATATTGTAGTCTGAGAGCGTGCGGCCATCTTCCAACTGTTTGCCAGCGAAAATC 238438 Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072 | || ||| || || || ||||| ||||||||||| |||||||| ||| || |||||| Sbjct 238437 AATCTTTGCTGATCAGGGGGAATTCCTTCTTTGTCCTGAATTTTGGCCTTTACATTCTCA 238378 Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAAC 195132 || || || || ||| ||||| | || | ||||| || ||||||||||| ||||| Sbjct 238377 ATAGTATCGGAGGCTTCGACTTCCAAAGTGATGGTCTTCCCAGTCAAAGTTTTAACGAAG 238318 Query 195133 ACTTGCATTT 195142 | ||||||| Sbjct 238317 ATCTGCATTT 238308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109337087941322