Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_018279.1 Length=49116 Score E Sequences producing significant alignments: (Bits) Value seq3501 145 2e-30 >seq3501 Length=12068 Score = 145 bits (160), Expect = 2e-30 Identities = 731/1131 (65%), Gaps = 49/1131 (4%) Strand=Plus/Plus Query 24418 GGTGATTCAATGATTGATGCAGGCATCAACGACGGTGATCTGCTGGTGGTGGATAGCTCA 24477 || || ||||||||||| || |||||| ||| || || |||||||| ||||| |||| Sbjct 3054 GGCGAATCAATGATTGACGCCGGCATCTGCGATGGCGACCTGCTGGTTGTGGAGAGCTTT 3113 Query 24478 CGAACTGCTGAACACGGCGATATTGTTATTGCAGCCGTGGATGGGGAGTTTACTGTTAAA 24537 | | | ||||||||||| || || || ||| | ||||| || ||||| || Sbjct 3114 GCTGCCCCACAGCACGGCGATATCGTCATCGCGGCCATCGATGGCGAATTTACCTGCAAG 3173 Query 24538 CGCCTGCAGCTGCGACC-TACAGTTCAGCTCAATCCGATGAACAGCGCTTATTCGCCGAT 24596 |||||||||||| || | | | | || | || ||| ||| || | |||| Sbjct 3174 CGCCTGCAGCTGGTTCCCTTCCCTGCC-CTGCAGCCAGCCAACGTCGCCTA--CCTCGAT 3230 Query 24597 CATCGTCGGCAGCGAAGACA-CGCT--GGACGTATTCGGCGTCGTT----ACT---TTCA 24646 || | | ||||| ||| || | || || || ||||| || ||| | || Sbjct 3231 ATTCCGCTG-AGCGATGACGTCGATACGGTGGTGTTTGGCGTGGTGCGCCACTGCGTACA 3289 Query 24647 TCGTTAAAACAGCGAGCTGAGTATGTTCGCACTTTGCGATGTTAATTCGTTTTACGCCAG 24706 | | | ||| | | |||||||| || || || || || |||||||| Sbjct 3290 TAGCTT---CAGGTACTAAACCATGTTCGCCCTGGTTGACGTCAACAGCTTCTACGCCAG 3346 Query 24707 TTGTGAAACTGTATTCAGACCAGATTTGAGAGGGCGCCCGGTTGTCGTACTGTCGAACAA 24766 || || || || || | || || || | || |||||||| |||||||||||||| Sbjct 3347 CTGCGAGACCGTCTTTCGCCCCGACCTGCGCGGCAAACCGGTTGTGGTACTGTCGAACAA 3406 Query 24767 TGATGGTTGTGTGATTGCGCGCAGCACCGAGGCGAAGCAACTCGGTATCGCAATGGGTGA 24826 |||||| ||| | | || |||||| ||||| || || | ||| | |||||| || Sbjct 3407 TGATGGCTGTATCGTCGCACGCAGCCGTGAGGCAAAAGAAATTGGTCTTAAAATGGGCGA 3466 Query 24827 GCCATACTTCAAACAGAAAGAACGCTTCCAGCAATTTGGTGTTGTTT-GC-TTCAGCAGT 24884 || | ||||| ||||||| | | | ||| ||| | || ||| ||| Sbjct 3467 ACCCTGGTTCAAGGTCAAAGAACAGGCCGAAACAAAAGGT--TGTATCGCATTCTCCAGC 3524 Query 24885 AATTATGAGCTTTACGCTGATATGTCGAACCGGGTAATGACCACACTCGAGG-AGATGTC 24943 ||||| | ||| ||||| || | ||| | | | || | | | ||| ||||| | Sbjct 3525 AATTACGCGCTGTACGCCGACTTCAGCAACAGATTCACCACTATATT-GAGCCAGATGAC 3583 Query 24944 GCCGCGGGTAGAAATTTACAGCATTGATGAGGCTTTTTGTGATCTGACGGGGATAC-GAA 25002 |||||| || ||||| || ||| |||||||| || || || | || || || | || Sbjct 3584 GCCGCGCGTTGAAATCTATTCCATCGATGAGGCCTTCTGCGACTTCACCGGCATGCAGAG 3643 Query 25003 GCTGCCGGGATCTGACAGATTTCGGGCGCGAGATAAGAGCGACGG-TCCTGAAGCGCACG 25061 |||| | | || | || ||| | || || | || | | | | | ||| || Sbjct 3644 GCTGGTCGATTTCGAG-GCTTACGGCCAGGAAATGCGC-CGTCAGATACGTAGGCGAACT 3701 Query 25062 CACCTGACTGTCGGCGTAGGCATTGCCCAGACGAAAACCCTTGCCAAGCTGGCTAACCAT 25121 |||||||| || || || || || | | || ||||| || || || ||||| ||| | Sbjct 3702 CACCTGACCGTTGGGGTCGGTATCGGGCCCACCAAAACGCTGGCAAAACTGGCCAACTAC 3761 Query 25122 GCTGCGAAAAAGTGG-CAGCGCCAGACCGGCGGGGTGGTTGACTT--GTCGAACATTGAC 25178 || || ||||||||| |||| ||||| || ||||| ||| | ||| || | | Sbjct 3762 GCAGCCAAAAAGTGGACAGCT----ACCGGAGGTGTGGTGGACCTTAGTCAGCCA--GCC 3815 Query 25179 CGCCAGCGTCGGCTGCTGGCACTGATACCCGTAGAGGATGTGTGGGGTGTCGGTAGGCGT 25238 || ||||| | || |||| ||| | || |||||||| || |||||||| || || Sbjct 3816 CGTCAGCGCAAGTTGATGGCGCTGGTGCCGGTAGAGGAAGTATGGGGTGTGGGCAGAAAG 3875 Query 25239 ATCAGCAAGAAGCT--CAATGCCATGGGAATCAAAACGGCTCTGGATCTCTCAGAGCAAA 25296 ||| ||||| ||| | ||| ||||| |||| | || ||| | || | || || Sbjct 3876 ATCGGCAAGCGGCTGTCCATG--ATGGGTATCACCAGCGCGCTGCAGCTGGCCGA-CATG 3932 Query 25297 GCACCTG-GATTATCCGCAAGCACTTTAATGTGGTACTGGAACGAACGGTCCGGGAGCTG 25355 | || ||| | || || || ||| ||||| || ||||| || ||||| |||||| Sbjct 3933 CCGCCACCGATGGTGCGTAAACAGTTTTCGGTGGTGCTCGAACGTACCGTCCGCGAGCTG 3992 Query 25356 CGTGGCGAACCATGTCTGGATCTGGAGGAGTTTGCGCCGGCAAAGCAGGAAATCGTCTGC 25415 ||| || || |||| ||||| ||||| || | | || || ||||||||||| Sbjct 3993 AATGGTATTCCTTGCCTGGGACTGGAAGAGTTCGCCGCACCGAAAGAGCAAATCGTCTGC 4052 Query 25416 AGCCGGTCATTCG--GAGAACGCGTTACCGAATACGAACAG-ATGCGCCAGGCTATCTGC 25472 ||||| |||| ||||| | || || ||| |||| ||| ||||| | || Sbjct 4053 TCGCGGTCGTTCGGCGAGAAACC--CACTGATCACG-ACAGTTTGCATCAGGCGGTATGT 4109 Query 25473 AGTTATGCTGCCCGTGGTGCTGAAAAACTACGTGGTGAGCACCAGTATTGC 25523 |||| | || | || || ||||| |||| |||||||||| |||| Sbjct 4110 TCCCATGCCGAGCGGGCGGCGGAGAAACTGCGTGCAGAGCACCAGTTTTGC 4160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157030640775976