Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq434 93.3 5e-14 >seq434 Length=533563 Score = 93.3 bits (102), Expect = 5e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || ||||| || || | ||||| || ||||||||||| |||||||| || || || ||| Sbjct 533388 ACTCCAATTGGTCCCATCCCAGGTCCACCACCTCCATGAGGAATACAAAAGGTTTTGTGT 533329 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 || || | || ||||||||| |||||||||| ||| | || || || || ||| Sbjct 533328 AAGTTCAAGTGTGATACATCTGATCCATAGTCACCAGGTCTGCATAATCCAACTTGGGCA 533269 Query 138303 TTTAGATTTGCACCATCGAGATATACCTG 138331 || | || |||||||| || || ||||| Sbjct 533268 TTCATGTTGGCACCATCTAGGTAAACCTG 533240 Score = 82.4 bits (90), Expect = 9e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 139272 CCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATG 139331 |||||||| | ||| | | ||| ||||||||| | || || || || ||||||||| Sbjct 529728 CCATGATAAACAGCAAACATGGCAGCCATATTTGCTAACAAGGCCTGAGCAGTGCAGATG 529669 Query 139332 TTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTAT 139391 ||||| ||||| || |||| ||||| ||||| |||| |||||| | |||| | ||| Sbjct 529668 TTACTTGTTGCCTTATCTCGCCTAATGTGCTGTTCTCGAGTTTGCAAAGCTAGACGGTAA 529609 Query 139392 GCA 139394 ||| Sbjct 529608 GCA 529606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578924823778320