Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq3560 140 3e-28 seq7337 109 5e-19 seq2348 93.3 4e-14 seq1460 82.4 7e-11 >seq3560 Length=1522174 Score = 140 bits (154), Expect = 3e-28 Identities = 145/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| || || || ||||||||||| || ||||| ||| | | Sbjct 965990 ATGCAGATCTTCGTCAAAACTCTTACGGGAAAAACTATTACCCTTGAAGTGGAACCATCA 966049 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || ||||||||| ||||| ||||| || || || || || Sbjct 966050 GACACTATTGAAAACGTTAAGGCAAAGATCCAGGACAAGGAAGGCATTCCACCTGACCAG 966109 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||||||||| || ||||||||||||||| |||| | || ||||||||| Sbjct 966110 CAGAGATTGATCTTTGCTGGTAAACAGCTGGAGGATGGCAGAACTCTTTCTGATTATAAC 966169 Query 24884 ATTCAAAAGG 24893 || ||||||| Sbjct 966170 ATCCAAAAGG 966179 Score = 127 bits (140), Expect = 2e-24 Identities = 141/188 (75%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| |||| || || || || |||||||| || | ||||| ||| | | Sbjct 965685 ATGCAAATATTTGTTAAGACTCTGACTGGAAAAACTATCACTTTGGAAGTGGAACCGTCA 965744 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||||||||| || ||||| || |||||||| ||| Sbjct 965745 GACACCATTGAGAACGTCAAGGCCAAGATCCAAGATAAGGAAGGCATTCCTCCCGACCAA 965804 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||| || || ||||||||||| ||| |||| | | |||||||||||| Sbjct 965805 CAGAGATTGATCTTCGCTGGCAAACAGCTGGAAGATGGCAGAACCCTTTCAGATTATAAC 965864 Query 24884 ATTCAAAA 24891 || ||||| Sbjct 965865 ATCCAAAA 965872 Score = 127 bits (140), Expect = 2e-24 Identities = 144/191 (75%), Gaps = 3/191 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| || || || ||||||||||| || ||||| ||| | | Sbjct 972962 ATGCAGATCTTCGTCAAAACTCTTACGGGAAAAACTATTACCCTTGAAGTGGAACCATCA 973021 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || || | ||| ||| |||||||||||| ||||| || || || || || Sbjct 973022 GATACGATTGAGAATGTTAAGGCAA--GATCCAAGACAAGGAAGGCATTCCACCTGACCA 973079 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | ||||||||||| || ||||||||||||||| ||| | |||||||| || Sbjct 973080 GCAGAGATTGATCTTTGCTGGTAAACAGCTGGAGGATGGCCGAACACTCTCAGATTACAA 973139 Query 24883 CATTCAAAAGG 24893 |||||| |||| Sbjct 973140 CATTCAGAAGG 973150 Score = 114 bits (126), Expect = 1e-20 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| |||| || || || || |||||||| || || ||||| || | | Sbjct 970990 ATGCAGATCTTCGTTAAGACACTTACAGGGAAAACTATAACTCTTGAAGTGGAGCCGTCA 971049 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| ||||| || || || || ||| Sbjct 971050 GACACTATTGAGAACGTGAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 971109 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||||||||| || || ||||| || ||| ||| | | || ||||| ||| Sbjct 971110 CAGAGGTTGATCTTTGCAGGAAAGCAGCTTGAAGATGGCCGAACCCTCTCTGATTACAAC 971169 Query 24884 ATTCAAAA 24891 |||||||| Sbjct 971170 ATTCAAAA 971177 Score = 111 bits (122), Expect = 1e-19 Identities = 144/195 (74%), Gaps = 3/195 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || || || || || || ||||| || ||||| ||| | | Sbjct 967773 ATGCAAATCTTTGTCAAGACACTCACTGGAAAGACAATTACTCTGGAAGTGGAACCTTCA 967832 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || || | ||| ||||| ||||| ||||| ||||| || || || || || Sbjct 967833 GACACCATTGAGAATGTTAAGGCAAAA-ATCCAGGACAAGGAAGGCATTCCACCTGACCA 967891 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | ||||||||||| || ||||||||||||||| ||| | |||||||| || Sbjct 967892 GCAGAGATTGATCTTTGCTGGTAAACAGCTGGAGGATGGCCGAACACTCTCAGATTACAA 967951 Query 24883 CATTCA-AAAGGAAT 24896 ||| || ||||| || Sbjct 967952 CATCCAGAAAGGTAT 967966 Score = 100 bits (110), Expect = 3e-16 Identities = 142/193 (74%), Gaps = 5/193 (3%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || |||| || || || || || || || || || ||||| || |||| | Sbjct 967207 ATGCAAATATTCGTTAAGACACTGACTGGAAAGACCATCACACTGGAAGTGGA-GCCATC 967265 Query 24764 -GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||| | || || | ||| ||||| ||||| ||||||||||| || || || || | Sbjct 967266 AGACACTATTGAGAATGTTAAGGCAAAA-ATCCAGGACAAAGAAGGCATTCCACCAGACC 967324 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 |||| | ||||| ||||| || ||||||||||| ||| | | | || ||||||| Sbjct 967325 AACAGAGATTGATATTTGCTGGCAAACAGCTGGAAGATGGCCGTACACTCTCTGATTATA 967384 Query 24882 ACATTCA-AAAGG 24893 ||||||| ||||| Sbjct 967385 ACATTCAGAAAGG 967397 Score = 96.9 bits (106), Expect = 3e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || || || || || |||||||| || || ||||| ||| | | Sbjct 971294 ATGCAAATTTTCGTCAAGACACTTACAGGGAAAACTATAACTCTTGAAGTGGAACCGTCA 971353 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| || ||||| || || ||||| || || Sbjct 971354 GACACTATTGAGAACGTGAAGGCCAAGATCCAGGATAAAGAGGGCATTCCTCCTGACCAG 971413 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||||||||| || || ||| |||||||| | | | | || ||||| ||| Sbjct 971414 CAGAGATTGATCTTTGCAGGAAAGCAGTTGGAGGATGGTCGTACCCTCTCTGATTACAAC 971473 Query 24884 ATTCAAAA 24891 |||||||| Sbjct 971474 ATTCAAAA 971481 Score = 84.2 bits (92), Expect = 2e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || || || || |||||||| |||||||| || | | Sbjct 965388 GATGCAGATCTTCGTCAAGACCCTTACAGGGAAGACTATTACCCTCGAAGTTGAGCCTTC 965447 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| | |||| || || || || ||||| || || ||||| || ||||| || Sbjct 965448 TGATACAATTGAAAATGTGAAGGCTAAAATTCAAGATAAGGAGGGAATCCCGCCCGACCA 965507 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | |||| ||||| || || || | || ||| | | | ||||| || || Sbjct 965508 ACAGAGACTGATTTTTGCTGGAAAGCAATTAGAAGATGGCCGCACACTTTCAGACTACAA 965567 Query 24883 CATTCAAAA 24891 ||||||||| Sbjct 965568 CATTCAAAA 965576 >seq7337 Length=451322 Score = 109 bits (120), Expect = 5e-19 Identities = 152/209 (73%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA-C 24762 ||||||||||| | || || || ||||| || || || || || || || | ||||| | Sbjct 240000 ATGCAGATCTTCGTGAAGACTCTTACCGGGAAGACCATCACCCTGGAGGTTG-AGCCATC 240058 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | |||| |||||| || |||||||| || || || || || || || || Sbjct 240059 AGACACAATTGAAAATGTAAAAGCCAAAATCCAAGATAAGGAGGGTATCCCACCTGACCA 240118 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | | |||||||| || || ||||| |||||| | | | |||| || ||||| Sbjct 240119 ACAGAGACTCATCTTTGCTGGCAAGCAGCTTGAGGATGGACGTACCTTGTCCGACTATAA 240178 Query 24883 CATTCAAAAGGAATCGACACTACA-CTTG 24910 ||||| || ||||| ||||| || |||| Sbjct 240179 TATTCAGAAAGAATCAACACTTCATCTTG 240207 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| ||||||| | || || || || || || | ||||| |||||| || Sbjct 238310 ATGCAGATCTTCGTTAAAACTTTGACTGGGAAGACCATCACTTTGGAAGTCGAAGCCTCC 238369 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | ||||| || || || |||||||||||||| || || ||||| Sbjct 238370 GATACTATTGAGAATGTAAAGGCCAAAATTCAGGACAAAGAAGGAATTCCCCCTGATCAG 238429 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT 24859 ||| | ||||| || || || |||||| |||| ||| Sbjct 238430 CAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGAT 238465 >seq2348 Length=1756034 Score = 93.3 bits (102), Expect = 4e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 139119 GCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTG 139178 ||||||||| || || || | ||||| |||||| || ||||| || || | ||||| || Sbjct 614267 GCTGTATTCAACTATCTCAGTACACAGATTACTGCATTTGATGGTTCCAAGGTTTTGCTG 614208 Query 139179 ATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTC 139232 ||| ||||| || |||||||||||||| |||||| | || || |||||||| Sbjct 614207 ATTAGATTTTCTATTGCAAGCATCTTTGTATAGCATAAATGGAGTTCCAGTTTC 614154 >seq1460 Length=1689650 Score = 82.4 bits (90), Expect = 7e-11 Identities = 142/201 (71%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| |||| |||||||| || || || || || || |||| | Sbjct 1136790 ATGCAGATTTTCGTAAAAACCTTAACGGGTAAAACGATAACCCTTGAGGTTGA-GCCAGC 1136732 Query 24764 G-ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 | |||| | |||| || || || || || || ||||||||||| || || || || Sbjct 1136731 GGACACCATTGAAAATGTGAAGGCTAAAATTCAGGATAAAGAAGGAATTCCACCTGACCA 1136672 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | | || || || || || || || || ||| ||||| | |||||||| || Sbjct 1136671 GCAAAGGCTTATTTTCGCTGGAAAGCAACTTGAAGATGGGAGAACTCTTTCAGATTACAA 1136612 Query 24883 CATTCA-AAAGGAATCGACAC 24902 || || ||||| || ||||| Sbjct 1136611 TATCCAGAAAGGTAT-GACAC 1136592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449840429262480