Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_022059.1 Length=77367 Score E Sequences producing significant alignments: (Bits) Value seq3501 215 3e-51 seq2686 145 4e-30 >seq3501 Length=12068 Score = 215 bits (238), Expect = 3e-51 Identities = 432/631 (68%), Gaps = 37/631 (6%) Strand=Plus/Plus Query 67720 CGCCTACATCGACGCCGAACATTCTCTCGACCCTGAGTACGCCGCGGCGCTCGGGGTGGA 67779 ||||| ||||| ||||||||| | || ||||| |||||| ||| || ||||| Sbjct 2085 CGCCTTTATCGATGCCGAACATGCCCTTGACCCGCGATACGCCAAAAAGCTGGGCGTGGA 2144 Query 67780 TGTCGACAATCTCGTGGTTGTGCAGCCAGACACTGGCGAGCAGGCCCTGGAGAT---CGT 67836 ||||||| || || | ||||| ||||||||||||||||| ||||| || || Sbjct 2145 CATCGACAACCTGCTGATATCCCAGCCGGACACTGGCGAGCAGGCACTGGAAATTACCGA 2204 Query 67837 TGACCTTCT-CGTCAAGTCTGGCGAGGTTTCCATCATCGTTGTGGACTCTGTGGCGGCCC 67895 || || | ||| || || | | | ||||||| || ||||| |||||||| Sbjct 2205 TGGACTGGTACGT----TCCGGTGCCATCAGCGTCATCGTCGTCGACTCGGTGGCGGCAT 2260 Query 67896 TGGTGCCGCGGGCGGAGCTCGAAGGGGACATCGGGGACTCGCACGTCGGCCTGCATGCCC 67955 || ||| |||||| |||| || || ||||| ||| ||||| | ||| ||||||||| Sbjct 2261 TGACGCCCAAGGCGGAAATCGAGGGAGAAATCGGTGACACGCACATGGGCGTGCATGCCC 2320 Query 67956 GCCTGATGTCTCAGGCCATGCGCAAGCTGACCGGCACGATTGCCAGCACCAACACGCTCA 68015 || ||||| |||||| |||||||||||| |||| || | || || || || Sbjct 2321 GCATGATGAGTCAGGCGATGCGCAAGCTGCGGGGCAGCATCAATACCAGTAAGACCATCG 2380 Query 68016 CCCTGTGGGTGAATCAGCTGCGCGAGAAGATCGGCAACGTGGGCTACGG---CCCGAATG 68072 | | | | || ||||||||| ||| ||||| |||| | ||| |||| | Sbjct 2381 TCATTTTTATCAACCAGCTGCGCATGAAAATCGG---CGTGATGTTCGGCAACCCG---G 2434 Query 68073 AGACCACCACCGGTGGTAAGGCTCTGCGCTTCTACGCCTCGGTGCGTATGGATGTCCGCA 68132 | ||||| ||||| || || ||||| ||||| || |||||||| |||||||| ||| Sbjct 2435 AAACCACTACCGGCGGCAATGCTCTCAAGTTCTATGCGTCGGTGCGCATGGATGTTCGCC 2494 Query 68133 GGAT---CGCCACCGAGAAGGAAGGCGATGAGG---CTG------TCGGCAACCGCACGC 68180 | || ||||| | ||| ||||| ||| ||| | |||| | || | Sbjct 2495 GCATCGGCGCCATCAAGAGCACCGGCGACAAGGACCCTGTGGTGATTGGCAGCGAAACCC 2554 Query 68181 GCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCACCGCCAGGCTGAGTTTTCCA--T 68238 |||| ||||| |||||||| || ||||||| ||| ||||||||||||| ||||| | Sbjct 2555 GCGTCAAGGTCGTCAAGAATAAAGTGGCGCCGCCGTTCCGCCAGGCTGAG--TTCCAACT 2612 Query 68239 CGTCTACGGCGAGGGCATTTCCCGCGAGGCCGAACTCCTCGACATGGCCGTTTC--CCGA 68296 | |||||||| || |||||||| | | || | |||||| ||| ||| | || | Sbjct 2613 GTTGTACGGCGAAGGAATTTCCCGTGCCGGTGAGGTGCTCGACCTGGGCGTGGCAGCCAA 2672 Query 68297 GGGCTCATCAAGAAGTCTGGGGCCTGGTTCA 68327 |||||| ||| | |||||||||| || Sbjct 2673 --AATCATCAGCAAGGCCGGGGCCTGGTACA 2701 >seq2686 Length=5122 Score = 145 bits (160), Expect = 4e-30 Identities = 436/663 (66%), Gaps = 19/663 (3%) Strand=Plus/Plus Query 67503 TCGATAAGAGGTTCGGCGCCGGGGCCGCAATGACCCTCGGCGCCAAGCC--GCA-GACTG 67559 |||| ||| ||||||| || ||| ||| ||| |||| ||| | ||| | ||| Sbjct 4471 TCGAGAAGGCGTTCGGCAAAGGCGCCATCATGCGCCTGGGCGACAACCATGGCATGGCTG 4530 Query 67560 TGGACACCATTCCCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATC 67619 | || || || ||||||||| | | || ||| ||| |||||| || || | Sbjct 4531 TCGAACGTATCCCGACCGGCTCGCTCGGCCTCGACATCGCGCTCGGC---GGTGGCCTGC 4587 Query 67620 CGAGGGGCCGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCC 67679 || ||||| | || |||||||| || ||||| || || ||| | || | || Sbjct 4588 CGGTCGGCCGCATCACCGAAATCTACGGCCCCGAGTCGTCCGGCAAGACCACCGTCGCCC 4647 Query 67680 TCCACGCGGTGGCCAATGCCCAGAAGGCCGG-TGGCAACGCCGCCTACATCGACGCCGAA 67738 | | | ||| |||||| ||||| | |||| || |||| ||||| ||||| Sbjct 4648 TGTCGGTCATTGCCTGCGCCCAGCGCGCCGGCTTGCAATGC-GCCTTTATCGATGCCGAG 4706 Query 67739 CATTCTCTCGACCCTGAGTACGCCGCGGC-GCTCGGGGTGGATGTCGACAATCTCGTGGT 67797 || | ||||| || ||||| || || ||| || || ||| ||| | ||| | | Sbjct 4707 CACACGCTCGATCCGCGTTACGC-GCAGCAGCTGGGCGTCGATATCGGTGAACTCCTCAT 4765 Query 67798 TGTGCAGCCAGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGG 67857 ||||| ||||| ||||||||||| ||||| ||| |||| | || || || Sbjct 4766 CTCCCAGCCCGACACCGGCGAGCAGGCGCTGGAAATCTGTGACGCCTTGGTGCGTTCCGG 4825 Query 67858 CGAGGTTTCCATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGA 67917 || || | | | || || || || || || |||||||||||| || || || Sbjct 4826 CGCCGTCGGCGTGGTGGTGGTCGATTCCGTCGCCGCCCTGGTGCCGAAAAACGAACTGGA 4885 Query 67918 AGGGGACATCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCG 67977 |||||| ||||| ||| | || | |||||||| |||||| ||||| ||||| ||||| Sbjct 4886 AGGGGAGATCGGCGACGCCCAGATGGGCCTGCAGGCCCGCATGATGAGCCAGGCGATGCG 4945 Query 67978 CAAGCTGACCGGCACGATTGCCAGCACCAACACGCTCACCCTGTGGGTGAATCAGCTGCG 68037 |||||||| |||| || || |||| |||| | | | | || |||||||| Sbjct 4946 CAAGCTGAAGGGCAGCATCAACACCACCCGCACGGTGGTGATCTTCATCAACCAGCTGCG 5005 Query 68038 CGAGAAGATCGGC---AACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGC 68094 | |||||||||| | | ||| || |||||| |||||| |||| || || || Sbjct 5006 CATGAAGATCGGCGTGATGTTCGGCAAC--CCCGAA----ACCACCGCCGGCGGCAACGC 5059 Query 68095 TCTGCGCTTCTACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGG 68154 || ||||| |||||||||||| | || || || | || || || |||||||| Sbjct 5060 CCTCAAGTTCTATGCCTCGGTGCGTCTCGACGTGCGTGGCGCCGGCAACGTCAAGGAAGG 5119 Query 68155 CGA 68157 || Sbjct 5120 GGA 5122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247418941458528