Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq3560 96.9 2e-15 seq7337 91.5 1e-13 >seq3560 Length=1522174 Score = 96.9 bits (106), Expect = 2e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 34790 TTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATC 34849 || |||||||| ||||| || || |||| |||| || | ||||||||| || || ||| Sbjct 965576 TTTTGAATGTTGTAGTCTGAAAGTGTGCGGCCATCTTCTAATTGCTTTCCAGCAAAAATC 965517 Query 34850 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT 34909 |||| || ||||| |||| | |||||||| || | ||||| || || | | Sbjct 965516 AGTCTCTGTTGGTCGGGCGGGATTCCCTCCTTATCTTGAATTTTAGCCTTCACATTTTCA 965457 Query 34910 ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAG 34969 || | ||| | ||| || || | ||| || ||||| || || |||||||| || ||| Sbjct 965456 ATTGTATCAGAAGGCTCAACTTCGAGGGTAATAGTCTTCCCTGTAAGGGTCTTGACGAAG 965397 Query 34970 ATCTGCAT 34977 |||||||| Sbjct 965396 ATCTGCAT 965389 >seq7337 Length=451322 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 34762 CCTCAGGACCAGGTGAA-TGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCT 34820 ||| || || || |||| || || | || |||||||| |||||||| || | | | || Sbjct 240215 CCTAAGAACAAGATGAAGTGTTGAT-TCTTTCTGAATATTATAGTCGGACAAGGTACGTC 240157 Query 34821 CATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCT 34880 |||| || || ||||| || || ||||| |||| || ||||| | || | ||||||| Sbjct 240156 CATCCTCAAGCTGCTTGCCAGCAAAGATGAGTCTCTGTTGGTCAGGTGGGATACCCTCCT 240097 Query 34881 TGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTA 34940 | || | ||||| ||| || | | || | || | ||| || || | ||| | Sbjct 240096 TATCTTGGATTTTGGCTTTTACATTTTCAATTGTGTCTGATGGCTCAACCTCCAGGGTGA 240037 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||||| || || || ||||| || ||||||||||| Sbjct 240036 TGGTCTTCCCGGTAAGAGTCTTCACGAAGATCTGCAT 240000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325652447272754