Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_022976.1 Length=75894 Score E Sequences producing significant alignments: (Bits) Value seq3501 192 3e-44 seq2686 154 7e-33 >seq3501 Length=12068 Score = 192 bits (212), Expect = 3e-44 Identities = 403/591 (68%), Gaps = 31/591 (5%) Strand=Plus/Plus Query 66240 CGCCTACATCGACGCTGAGCACTCCCTGGACCC-CGAGTACGCCAAGGCGCTCGGTGTGG 66298 ||||| ||||| || || || |||| ||||| ||| |||||||| ||| || |||| Sbjct 2085 CGCCTTTATCGATGCCGAACATGCCCTTGACCCGCGA-TACGCCAAAAAGCTGGGCGTGG 2143 Query 66299 ACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGAT---CG 66355 || |||||||||| || | ||||||||||||||||||||||| ||||| || || Sbjct 2144 ACATCGACAACCTGCTGATATCCCAGCCGGACACTGGCGAGCAGGCACTGGAAATTACCG 2203 Query 66356 TTGACCTCCT-CGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCC 66414 || || | ||| || || | | | || ||||||| ||||| |||||||| Sbjct 2204 ATGGACTGGTACGT----TCCGGTGCCATCAGCGTCATCGTCGTCGACTCGGTGGCGGCA 2259 Query 66415 CTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCG 66474 || ||| || || |||| || || ||||| |||| ||| | ||| |||| || Sbjct 2260 TTGACGCCCAAGGCGGAAATCGAGGGAGAAATCGGTGACACGCACATGGGCGTGCATGCC 2319 Query 66475 CGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAACACGCTG 66534 ||| | ||| ||||| ||||||||||| |||| |||| | || || || | Sbjct 2320 CGCATGATGAGTCAGGCGATGCGCAAGCTGCGGGGCAGCATCAATACCAGTAAGACCATC 2379 Query 66535 ACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGC---CCGAAT 66591 | | |||||||| ||||| ||| |||||| ||| | |||| ||| Sbjct 2380 GTCATTTTTATCAACCAGCTGCGCATGAAAATCGGC---GTGATGTTCGGCAACCCG--- 2433 Query 66592 GAGACCACCACGGGCGGAAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGT 66651 || ||||| || ||||| || ||| | | |||||| || || || ||||||||||| || Sbjct 2434 GAAACCACTACCGGCGGCAATGCTCTCAAGTTCTATGCGTCGGTGCGCATGGATGTTCGC 2493 Query 66652 CGCATCGCCACCGAGAAG-GAA--GGCGATGAGG---CTGTCG------GCAACCGCACC 66699 ||||||| | || ||| | | ||||| ||| |||| | ||| | ||| Sbjct 2494 CGCATCGGCGCCATCAAGAGCACCGGCGACAAGGACCCTGTGGTGATTGGCAGCGAAACC 2553 Query 66700 CGGGTGAAAGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTC 66759 || || || ||||||||||| || |||| |||||| |||| | || |||||| | Sbjct 2554 CGCGTCAAGGTCGTCAAGAATAAAGTGGCGCCGCCGTTCCGCCAGGCTGAGTTCCAACTG 2613 Query 66760 GTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTG 66810 ||||||| || || || || |||| | || | |||||||||| |||| Sbjct 2614 TTGTACGGCGAAGGAATTTCCCGTGCCGGTGAGGTGCTCGACCTGGGCGTG 2664 >seq2686 Length=5122 Score = 154 bits (170), Expect = 7e-33 Identities = 358/531 (67%), Gaps = 23/531 (4%) Strand=Plus/Plus Query 66157 GAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACG-CGGTG---GC 66212 |||||||||||||| || || || || ||| | || ||| || | |||| || Sbjct 4605 GAAATCTACGGCCCCGAGTCGTCCGGCAAGACCACC----GTCGCCCTGTCGGTCATTGC 4660 Query 66213 CAATGCGCAGAAGGCCGG-TGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACC 66271 | || ||| ||||| | |||| || |||| ||||| || |||||| | || || | Sbjct 4661 CTGCGCCCAGCGCGCCGGCTTGCAATGC-GCCTTTATCGATGCCGAGCACACGCTCGATC 4719 Query 66272 CCGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACA 66331 | ||||| || ||| || || || ||| | ||| | | ||||| |||| Sbjct 4720 CGCGTTACGCGCAGCAGCTGGGCGTCGATATCGGTGAACTCCTCATCTCCCAGCCCGACA 4779 Query 66332 CTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTC--CAT 66389 | ||||||||||| ||||| ||| |||| | | || || |||| | ||| | | Sbjct 4780 CCGGCGAGCAGGCGCTGGAAATCTGTGACGCCTTGGTGCGTTCCGGCG--CCGTCGGCGT 4837 Query 66390 CGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGG 66449 || || || || || || || |||||||||||| ||| || ||||| || ||||| Sbjct 4838 GGTGGTGGTCGATTCCGTCGCCGCCCTGGTGCCGAAAAACGAACTGGAAGGGGAGATCGG 4897 Query 66450 GGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGG 66509 ||| || | |||||||| || ||| | ||| ||||| ||||||||||| | || Sbjct 4898 CGACGCCCAGATGGGCCTGCAGGCCCGCATGATGAGCCAGGCGATGCGCAAGCTGAAGGG 4957 Query 66510 CACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGG 66569 || |||| || |||| |||| || | ||| |||||||| ||||| ||||||||| Sbjct 4958 CAGCATCAACACCACCCGCACGGTGGTGATCTTCATCAACCAGCTGCGCATGAAGATCGG 5017 Query 66570 C---AACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTTTGAGGTTCTA 66626 | | | ||| || |||||| |||||| | ||||| || || | | |||||| Sbjct 5018 CGTGATGTTCGGCAAC--CCCGAA----ACCACCGCCGGCGGCAACGCCCTCAAGTTCTA 5071 Query 66627 CGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGA 66677 ||||| || || | || || ||| || || || || |||||||| || Sbjct 5072 TGCCTCGGTGCGTCTCGACGTGCGTGGCGCCGGCAACGTCAAGGAAGGGGA 5122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242705925464730