Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq1460 98.7 2e-15 seq3560 93.3 7e-14 >seq1460 Length=1689650 Score = 98.7 bits (108), Expect = 2e-15 Identities = 87/109 (80%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 146132 AGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAG 146191 ||||||||| || ||||| || ||| | || ||||| ||||| || ||||| ||||||| Sbjct 729425 AGGCATTCCCCCTGATCAGCAGAGATTGATCTTTGCTGGTAAGCAGTTAGAGGATAATAA 729366 Query 146192 AACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTA 146240 ||| ||| ||||||||||||| || |||||||| || | || || ||| Sbjct 729365 AACTTTATCAGATTATAATATTCAGAAAGAATCCACCTTACACTTGGTA 729317 >seq3560 Length=1522174 Score = 93.3 bits (102), Expect = 7e-14 Identities = 135/188 (72%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090 |||| || ||| | ||||| | || |||||||| ||||| |||| || |||| || | Sbjct 965991 TGCAGATCTTCGTCAAAACTCTTACGGGAAAAACTATTACCCTTGAAGTGGAACCATCA- 966049 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || |||||| |||| || || || || || || |||||||||||||| || || Sbjct 966050 GACACTATTGAAAACGTTAAGGCAAAGATCCAGGACAAGGAAGGCATTCCACCTGACCAG 966109 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || ||| | || ||||| |||||||| | || ||| ||||| | | |||||||| Sbjct 966110 CAGAGATTGATCTTTGCTGGTAAACAGCTGGAGGATGGCAGAACTCTTTCTGATTATAAC 966169 Query 146211 ATACAAAA 146218 || ||||| Sbjct 966170 ATCCAAAA 966177 Score = 89.7 bits (98), Expect = 8e-13 Identities = 133/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||||||||| | || || | || |||||||| || ||| | || || |||| | Sbjct 965686 TGCAAATATTTGTTAAGACTCTGACTGGAAAAACTATCACTTTGGAAGTGGAACCGTCAG 965745 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | || || || || || ||| ||| ||||||||||| ||||| |||| Sbjct 965746 ACACCATTGAGAACGTCAAGGCCAAGATCCAAGATAAGGAAGGCATTCCTCCCGACCAAC 965805 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||| | || || || || ||||| | || ||| ||||| | |||||||||| | Sbjct 965806 AGAGATTGATCTTCGCTGGCAAACAGCTGGAAGATGGCAGAACCCTTTCAGATTATAACA 965865 Query 146212 TACAAAAAG 146220 | ||||||| Sbjct 965866 TCCAAAAAG 965874 Score = 89.7 bits (98), Expect = 8e-13 Identities = 133/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | || ||| | || ||||| ||||||||| | || || |||| | | Sbjct 967774 TGCAAATCTTTGTCAAGACACTCACTGGAAAGACAATTACTCTGGAAGTGGAACCTTCAG 967833 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | ||||| || ||||| || || |||||||||||||| || || | Sbjct 967834 ACACCATTGAGAATGTTAAGGCAAAAATCCAGGACAAGGAAGGCATTCCACCTGACCAGC 967893 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||| | || ||||| |||||||| | || ||| |||| | ||||||| || | Sbjct 967894 AGAGATTGATCTTTGCTGGTAAACAGCTGGAGGATGGCCGAACACTCTCAGATTACAACA 967953 Query 146212 TACAAAAAG 146220 | || |||| Sbjct 967954 TCCAGAAAG 967962 Score = 86.0 bits (94), Expect = 1e-11 Identities = 134/188 (71%), Gaps = 3/188 (2%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090 |||| || ||| | ||||| | || |||||||| ||||| |||| || |||| || | Sbjct 972963 TGCAGATCTTCGTCAAAACTCTTACGGGAAAAACTATTACCCTTGAAGTGGAACCATCA- 973021 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||| ||| | ||||| || || || ||| || |||||||||||||| || || Sbjct 973022 GATACGATTGAGAATGTTAAGGC-AAGATCCAAGACAAGGAAGGCATTCCACCTGACCAG 973080 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || ||| | || ||||| |||||||| | || ||| |||| | ||||||| || Sbjct 973081 CAGAGATTGATCTTTGCTGGTAAACAGCTGGAGGATGGCCGAACACTCTCAGATTACAAC 973140 Query 146211 ATACAAAA 146218 || || || Sbjct 973141 ATTCAGAA 973148 Score = 84.2 bits (92), Expect = 3e-11 Identities = 134/190 (71%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGA-ACATAAC 146090 ||||||||||| | || ||| | || ||||| || || || | || || || ||| | Sbjct 967208 TGCAAATATTCGTTAAGACACTGACTGGAAAGACCATCACACTGGAAGTGGAGCCATCA- 967266 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 || |||||| | ||||| || ||||| || ||||||||||||||||| || ||| Sbjct 967267 GACACTATTGAGAATGTTAAGGCAAAAATCCAGGACAAAGAAGGCATTCCACCAGACCAA 967326 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || ||| | || ||||| || ||||| | || ||| | || | | |||||||| Sbjct 967327 CAGAGATTGATATTTGCTGGCAAACAGCTGGAAGATGGCCGTACACTCTCTGATTATAAC 967386 Query 146211 ATACAAAAAG 146220 || || |||| Sbjct 967387 ATTCAGAAAG 967396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786066497904720