Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq3560 89.7 5e-13 seq7337 82.4 7e-11 >seq3560 Length=1522174 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/192 (71%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 137222 CTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG--TCTTCGAGTTGTTTACCAGCATA 137279 |||| || ||||||||||| | | ||| ||| || || || |||||||||||| | Sbjct 967962 CTTTCTGGATGTTGTAATC--TGAGAGTGTTCGGCCATCCTCCAGCTGTTTACCAGCAAA 967905 Query 137280 GATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTG 137339 ||||| | ||||| || || || |||||||| ||||| |||||| || | | Sbjct 967904 GATCAATCTCTGCTGGTCAGGTGGAATGCCTTCCTTGTCCTGGATTTTTGCCTTAACATT 967845 Query 137340 TTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTAC 137399 || | ||||||| ||||| ||||| | ||| | ||||| || || | ||| || || Sbjct 967844 CTCAATGGTGTCTGAAGGTTCCACTTCCAGAGTAATTGTCTTTCCAGTGAGTGTCTTGAC 967785 Query 137400 GAATATTTGCAT 137411 || |||||||| Sbjct 967784 AAAGATTTGCAT 967773 Score = 84.2 bits (92), Expect = 2e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316 ||||| || ||||| |||||| | |||| | || || || || || |||||||||||| Sbjct 967361 TCTTCCAGCTGTTTGCCAGCAAATATCAATCTCTGTTGGTCTGGTGGAATGCCTTCTTTG 967302 Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376 || |||||| || | | || | ||||||| || || ||||| | || | Sbjct 967301 TCCTGGATTTTTGCCTTAACATTCTCAATAGTGTCTGATGGCTCCACTTCCAGTGTGATG 967242 Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 137415 ||||| || |||| ||| || ||||||||||||||| || Sbjct 967241 GTCTTTCCAGTCAGTGTCTTAACGAATATTTGCATACCT 967203 >seq7337 Length=451322 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316 ||||| | ||||| ||||| | |||| | ||||||||| || || || ||||||||| Sbjct 238464 TCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGCTGATCAGGGGGAATTCCTTCTTTG 238405 Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376 || |||||| |||| | || | || || | || ||| ||||| | ||| | Sbjct 238404 TCCTGAATTTTGGCCTTTACATTCTCAATAGTATCGGAGGCTTCGACTTCCAAAGTGATG 238345 Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 ||||| || ||||| ||||| ||||| || ||||| Sbjct 238344 GTCTTCCCAGTCAAAGTTTTAACGAAGATCTGCAT 238310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488481918271200