Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_023689.1 Length=76260 Score E Sequences producing significant alignments: (Bits) Value seq3501 197 7e-46 seq2686 163 1e-35 >seq3501 Length=12068 Score = 197 bits (218), Expect = 7e-46 Identities = 402/590 (68%), Gaps = 29/590 (5%) Strand=Plus/Plus Query 66330 CGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGA 66389 ||||| ||||| || || || |||| ||||| |||||||| ||| || ||||| Sbjct 2085 CGCCTTTATCGATGCCGAACATGCCCTTGACCCGCGATACGCCAAAAAGCTGGGCGTGGA 2144 Query 66390 CCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGAT---CGT 66446 | |||||||||| || | ||||||||||||||||||||||| ||||| || || Sbjct 2145 CATCGACAACCTGCTGATATCCCAGCCGGACACTGGCGAGCAGGCACTGGAAATTACCGA 2204 Query 66447 TGACCTCCT-CGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCC 66505 || || | ||| || || | | | || ||||||| ||||| |||||||| Sbjct 2205 TGGACTGGTACGT----TCCGGTGCCATCAGCGTCATCGTCGTCGACTCGGTGGCGGCAT 2260 Query 66506 TGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGC 66565 || ||| || || |||| || || ||||| |||| ||| | ||| |||| || | Sbjct 2261 TGACGCCCAAGGCGGAAATCGAGGGAGAAATCGGTGACACGCACATGGGCGTGCATGCCC 2320 Query 66566 GCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAACACGCTGA 66625 || | ||| ||||| ||||||||||| |||| |||| | || || || | Sbjct 2321 GCATGATGAGTCAGGCGATGCGCAAGCTGCGGGGCAGCATCAATACCAGTAAGACCATCG 2380 Query 66626 CGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAAC---G 66682 | | |||||||| ||||| ||| |||||| ||| | |||| ||| | Sbjct 2381 TCATTTTTATCAACCAGCTGCGCATGAAAATCGGC---GTGATGTTCGGC---AACCCGG 2434 Query 66683 AGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTC 66742 | ||||| || |||||||| ||| | | |||||| || || || ||||||||||| || | Sbjct 2435 AAACCACTACCGGCGGCAATGCTCTCAAGTTCTATGCGTCGGTGCGCATGGATGTTCGCC 2494 Query 66743 GCATCGCCACCGAGAAG-GAA--GGCGATGAGG---CTGTCG------GCAACCGCACCC 66790 |||||| | || ||| | | ||||| ||| |||| | ||| | |||| Sbjct 2495 GCATCGGCGCCATCAAGAGCACCGGCGACAAGGACCCTGTGGTGATTGGCAGCGAAACCC 2554 Query 66791 GGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCG 66850 | || |||||||||||||| || |||| |||||| |||| | || |||||| | Sbjct 2555 GCGTCAAGGTCGTCAAGAATAAAGTGGCGCCGCCGTTCCGCCAGGCTGAGTTCCAACTGT 2614 Query 66851 TGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTG 66900 ||||||| || || || || |||| | || | |||||||||| |||| Sbjct 2615 TGTACGGCGAAGGAATTTCCCGTGCCGGTGAGGTGCTCGACCTGGGCGTG 2664 >seq2686 Length=5122 Score = 163 bits (180), Expect = 1e-35 Identities = 424/632 (67%), Gaps = 27/632 (4%) Strand=Plus/Plus Query 66148 CTGGGTGACAAGCCA---CA-GACTGTGGA-CGTCATTCCCACCGGCTCTATCGCCCTGG 66202 ||||| ||||| ||| || | |||| || ||| || || |||||||| ||| ||| | Sbjct 4506 CTGGGCGACAA-CCATGGCATGGCTGTCGAACGT-ATCCCGACCGGCTCGCTCGGCCTCG 4563 Query 66203 ACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAG 66262 || ||| || ||| || || ||| ||||| | |||||||||||||| | Sbjct 4564 ACATCGCGCTCGGC---GGTGGCCTGCCGGTCGGCCGCATCACCGAAATCTACGGCCCCG 4620 Query 66263 AATCTTCAGGGAAGTCAACTCTGTGTCTCCACG-CGGTG---GCCAATGCGCAGAAGGCC 66318 | || || || ||| | || ||| || | |||| ||| || ||| ||| Sbjct 4621 AGTCGTCCGGCAAGACCACC----GTCGCCCTGTCGGTCATTGCCTGCGCCCAGCGCGCC 4676 Query 66319 GG-TGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGC 66377 || | |||| || |||| ||||| || |||||| | || || || ||||| || Sbjct 4677 GGCTTGCAATGC-GCCTTTATCGATGCCGAGCACACGCTCGATCCGCGTTACGCGCAGCA 4735 Query 66378 GCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCT 66437 ||| || || || ||| | ||| | | ||||| ||||| ||||||||||| || Sbjct 4736 GCTGGGCGTCGATATCGGTGAACTCCTCATCTCCCAGCCCGACACCGGCGAGCAGGCGCT 4795 Query 66438 GGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTC--CATCGTCGTCGTTGACTCT 66495 ||| ||| |||| | | || || |||| | ||| | | || || || || || Sbjct 4796 GGAAATCTGTGACGCCTTGGTGCGTTCCGGCG--CCGTCGGCGTGGTGGTGGTCGATTCC 4853 Query 66496 GTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGC 66555 || || |||||||||||| ||| || ||||| || ||||| ||| || | ||| Sbjct 4854 GTCGCCGCCCTGGTGCCGAAAAACGAACTGGAAGGGGAGATCGGCGACGCCCAGATGGGC 4913 Query 66556 CTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACC 66615 ||||| || ||| | ||| ||||| ||||||||||| | |||| |||| || |||| Sbjct 4914 CTGCAGGCCCGCATGATGAGCCAGGCGATGCGCAAGCTGAAGGGCAGCATCAACACCACC 4973 Query 66616 AACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGC 66675 |||| || | ||| |||||||| ||||| ||||||||| |||| | |||| Sbjct 4974 CGCACGGTGGTGATCTTCATCAACCAGCTGCGCATGAAGATCGG---CGTGATGTTCGGC 5030 Query 66676 CCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGAT 66735 ||| |||||| | |||||||| || | | |||||| ||||| || || | || Sbjct 5031 AACCCCGAAACCACCGCCGGCGGCAACGCCCTCAAGTTCTATGCCTCGGTGCGTCTCGAC 5090 Query 66736 GTCCGTCGCATCGCCACCGAGAAGGAAGGCGA 66767 || ||| || || || || |||||||| || Sbjct 5091 GTGCGTGGCGCCGGCAACGTCAAGGAAGGGGA 5122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243876980355246