Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq7337 102 8e-17 seq3560 95.1 1e-14 seq1460 87.8 2e-12 >seq7337 Length=451322 Score = 102 bits (112), Expect = 8e-17 Identities = 145/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || |||||||| ||||| || ||| || || | | | ||||| ||||||||||| Sbjct 240196 GTTGATTCTTTCTGAATATTATAGTCGGACAAGGTACGTCCA-TCCTCAAGCTGCTTGCC 240138 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-T 133581 || | ||||| | ||| ||||| || ||||| || ||||| || ||| ||| || | Sbjct 240137 AGCAAAGATGAGTCTCTGTTGGTCAGGTGGGATACCCTCCTTATCTTGGAT-TTTGGCTT 240079 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| ||||| | ||||| || || | ||||| ||| || ||||| |||| Sbjct 240078 TTACATTTTCAATTGTGTCTGATGGCTCAACCTCCAGGGTGATGGTCTTCCCGGTAAGAG 240019 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 240018 TCTTCACGAAGATCTGCAT 240000 >seq3560 Length=1522174 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || ||||| ||||| ||| | || | | ||| ||||||||||| ||||||||||| Sbjct 965839 TCTTCCAGCTGTTTGCCAGCGAAGATCAATCTCTGTTGGTCGGGAGGAATGCCTTCCTTA 965780 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | ||||| ||||| | || ||||| || | |||| Sbjct 965779 TCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTCTGACGGTTCCACTTCCAAAGTGATA 965720 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || |||||||| || || || || ||||| Sbjct 965719 GTTTTTCCAGTCAGAGTCTTAACAAATATTTGCAT 965685 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| ||||| || || || | || | | ||||||||| || || |||||||||||| Sbjct 966144 TCCTCCAGCTGTTTACCAGCAAAGATCAATCTCTGCTGGTCAGGTGGAATGCCTTCCTTG 966085 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||||| ||| | | |||| ||||| | || ||||| || | ||| | Sbjct 966084 TCCTGGATCTTTGCCTTAACGTTTTCAATAGTGTCTGATGGTTCCACTTCAAGGGTAATA 966025 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || |||||||| ||||| |||||||| Sbjct 966024 GTTTTTCCCGTAAGAGTTTTGACGAAGATCTGCAT 965990 Score = 91.5 bits (100), Expect = 1e-13 Identities = 114/155 (74%), Gaps = 1/155 (1%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| ||||| || || || | || | | ||||||||| || || |||||||||||| Sbjct 973115 TCCTCCAGCTGTTTACCAGCAAAGATCAATCTCTGCTGGTCAGGTGGAATGCCTTCCTTG 973056 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||| || ||| | | ||||| ||| || | || ||||| || | ||| | Sbjct 973055 TCTTGGATC-TTGCCTTAACATTCTCAATCGTATCTGATGGTTCCACTTCAAGGGTAATA 972997 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || |||||||| ||||| |||||||| Sbjct 972996 GTTTTTCCCGTAAGAGTTTTGACGAAGATCTGCAT 972962 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || |||||||| || || | || | || ||| ||||| || || || ||||||||| Sbjct 971144 TCTTCAAGCTGCTTTCCTGCAAAGATCAACCTCTGTTGGTCAGGTGGAATACCTTCCTTG 971085 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||| | | ||||| ||||| | |||||||| || | || | Sbjct 971084 TCTTGGATCTTGGCCTTCACGTTCTCAATAGTGTCTGACGGCTCCACTTCAAGAGTTATA 971025 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || || || || ||||| |||||||| Sbjct 971024 GTTTTCCCTGTAAGTGTCTTAACGAAGATCTGCAT 970990 >seq1460 Length=1689650 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 133471 CTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCCGCGTAAA 133530 ||||||| ||||||||||| | || | || || || ||||| || ||| ||| Sbjct 1136601 CTTTCTGGATATTGTAATCTGAAAGAGTTCTCCCATCTTCAAGTTGCTTTCCAGCGAAAA 1136660 Query 133531 TGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC-TTGAGCTGC 133589 | |||| |||||||| || || || ||||| || || ||| ||| || || | | Sbjct 1136661 TAAGCCTTTGCTGGTCAGGTGGAATTCCTTCTTTATCC-TGAATTTTAGCCTTCACATTT 1136719 Query 133590 TCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACG 133649 |||| ||||| | ||||| || || | ||| | ||||| || || | ||||||||| Sbjct 1136720 TCAATGGTGTCCGCTGGCTCAACCTCAAGGGTTATCGTTTTACCCGTTAAGGTTTTTACG 1136779 Query 133650 AAAATCTGCATG 133661 |||||||||||| Sbjct 1136780 AAAATCTGCATG 1136791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483359369301840