Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq7337 102 7e-17 seq1460 93.3 4e-14 >seq7337 Length=451322 Score = 102 bits (112), Expect = 7e-17 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 25153 AAGTAGTTTTCAATTAAACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGAT 25212 ||||| ||| | || | || ||||| | || || ||||| || || || || | || Sbjct 238288 AAGTATTTTACTTTTCAGGAAAATGCAGATCTTCGTTAAAACTTTGACTGGGAAGACCAT 238347 Query 25213 CACGATCGAAGTCGAAGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAA 25272 ||| | |||||||||||| ||||||||| ||| | ||||| |||||| || || Sbjct 238348 CACTTTGGAAGTCGAAGCCTCCGATACTATTGAGAATGTAAAGGCCAAAATTCAGGACAA 238407 Query 25273 AGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATG 25331 ||| || || || || |||||||||||| | |||| || |||||||| | ||||||| Sbjct 238408 AGAAGGAATTCCCCCTGATCAGCAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATG 238466 >seq1460 Length=1689650 Score = 93.3 bits (102), Expect = 4e-14 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 || |||||| | || |||||||| ||||| || ||| |||| || | || || || || Sbjct 1136794 CAGCATGCAGATTTTCGTAAAAACCTTAACGGGTAAAACGATAACCCTTGAGGTTGA-GC 1136736 Query 25231 CAACG-ATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCG 25289 || || | || || || | || || |||||| |||||||| || || || || | Sbjct 1136735 CAGCGGACACCATTGAAAATGTGAAGGCTAAAATTCAGGATAAAGAAGGAATTCCACCTG 1136676 Query 25290 ATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATT 25349 | |||||||| || |||| || || || ||||| ||||||| |||| | | |||| Sbjct 1136675 ACCAGCAAAGGCTTATTTTCGCTGGAAAGCAACTTGAAGATGGGAGAACTCTTTCAGATT 1136616 Query 25350 ACAATATTCAAAAAG 25364 ||||||| || |||| Sbjct 1136615 ACAATATCCAGAAAG 1136601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445037839629120