Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq7337 105 7e-18 seq3560 102 8e-17 >seq7337 Length=451322 Score = 105 bits (116), Expect = 7e-18 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618 || || | ||||||||| || |||||||| | |||||||| || || || |||||||| Sbjct 238464 TCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGCTGATCAGGGGGAATTCCTTCTTTG 238405 Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678 || |||||||| || || || | || ||||| | ||| || || | ||| ||| Sbjct 238404 TCCTGAATTTTGGCCTTTACATTCTCAATAGTATCGGAGGCTTCGACTTCCAAAGTGATG 238345 Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || || || || |||||||||||||| || |||||||| Sbjct 238344 GTCTTCCCAGTCAAAGTTTTAACGAAGATCTGCATTTT 238307 >seq3560 Length=1522174 Score = 102 bits (112), Expect = 8e-17 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618 || || ||||||||||| || || ||||| | ||| || ||||| || |||||||| || Sbjct 965839 TCTTCCAGCTGTTTGCCAGCGAAGATCAATCTCTGTTGGTCGGGAGGAATGCCTTCCTTA 965780 Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678 ||||| || || ||||| || | ||||| |||| |||||| || | ||| || Sbjct 965779 TCTTGGATCTTGGCCTTGACGTTCTCAATGGTGTCTGACGGTTCCACTTCCAAAGTGATA 965720 Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 ||||| || || | ||| ||||| || ||||||||| Sbjct 965719 GTTTTTCCAGTCAGAGTCTTAACAAATATTTGCATT 965684 Score = 102 bits (112), Expect = 8e-17 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 134526 TTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATC 134585 |||||||||||||| || | ||| || || || | ||| || |||||||| ||| Sbjct 971481 TTTTGAATGTTGTAATCAGAGAGGGTACGACCATCCTCCAACTGCTTTCCTGCAAAGATC 971422 Query 134586 AAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCC 134645 || | |||||| || || || ||||| ||||| || || || || || || || Sbjct 971421 AATCTCTGCTGGTCAGGAGGAATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTCTCA 971362 Query 134646 AATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705 | ||||| |||| |||||| || ||||| || ||||| || || | || || |||||| Sbjct 971361 ATAGTGTCTGACGGTTCCACTTCAAGAGTTATAGTTTTCCCTGTAAGTGTCTTGACGAAA 971302 Query 134706 ATTTGCATT 134714 ||||||||| Sbjct 971301 ATTTGCATT 971293 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618 || || ||||||||||| ||||| ||||| | ||| || || || || ||||||||||| Sbjct 967361 TCTTCCAGCTGTTTGCCAGCAAATATCAATCTCTGTTGGTCTGGTGGAATGCCTTCTTTG 967302 Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678 || || |||||| || || || | ||||| || | ||||| || || || ||| Sbjct 967301 TCCTGGATTTTTGCCTTAACATTCTCAATAGTGTCTGATGGCTCCACTTCCAGTGTGATG 967242 Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || | || |||||||| |||||||| Sbjct 967241 GTCTTTCCAGTCAGTGTCTTAACGAATATTTGCAT 967207 Score = 89.7 bits (98), Expect = 5e-13 Identities = 133/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 134526 TTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATC 134585 |||||||||||||| || | ||| | || || ||||| || |||||||| ||| Sbjct 971177 TTTTGAATGTTGTAATCAGAGAGGGTTCGGCCATCTTCAAGCTGCTTTCCTGCAAAGATC 971118 Query 134586 AAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCC 134645 || | ||| || || || || || ||||| || ||||| || || || || || Sbjct 971117 AACCTCTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGCCTTCACGTTCTCA 971058 Query 134646 AATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705 | ||||| |||| ||||| || ||||| || ||||| || || | || |||||||| Sbjct 971057 ATAGTGTCTGACGGCTCCACTTCAAGAGTTATAGTTTTCCCTGTAAGTGTCTTAACGAAG 970998 Query 134706 ATTTGCATT 134714 || |||||| Sbjct 970997 ATCTGCATT 970989 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/191 (71%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583 |||| ||||||||||| || | || | || || |||||||| || ||||| | Sbjct 973150 CCTTCTGAATGTTGTAATCTGAGAGTGTTCGGCCATCCTCCAGCTGTTTACCAGCAAAGA 973091 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 |||| | |||||| || || || |||||||| || ||||| | | || || || | Sbjct 973090 TCAATCTCTGCTGGTCAGGTGGAATGCCTTCCTTGTCTTGGA-TCTTGCCTTAACATTCT 973032 Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | | || || || | |||||| || || ||||| ||||| || || | |||||| |||| Sbjct 973031 CAATCGTATCTGATGGTTCCACTTCAAGGGTAATAGTTTTTCCCGTAAGAGTTTTGACGA 972972 Query 134704 AAATTTGCATT 134714 | || |||||| Sbjct 972971 AGATCTGCATT 972961 Score = 82.4 bits (90), Expect = 8e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 134526 TTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATC 134585 ||||||||||||||||| || ||| | || || | || || || ||||||||| Sbjct 965576 TTTTGAATGTTGTAGTCTGAAAGTGTGCGGCCATCTTCTAATTGCTTTCCAGCAAAAATC 965517 Query 134586 AAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCC 134645 | | ||| || |||||||| || || || || ||||||||||| || || || Sbjct 965516 AGTCTCTGTTGGTCGGGCGGGATTCCCTCCTTATCTTGAATTTTAGCCTTCACATTTTCA 965457 Query 134646 AATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705 | ||| || || | || || ||||| ||||| || || || || | || || ||||| Sbjct 965456 ATTGTATCAGAAGGCTCAACTTCGAGGGTAATAGTCTTCCCTGTAAGGGTCTTGACGAAG 965397 Query 134706 ATTTGCAT 134713 || ||||| Sbjct 965396 ATCTGCAT 965389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505334176498320