Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq2348 89.7 4e-13 seq3560 86.0 5e-12 >seq2348 Length=1756034 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/228 (69%), Gaps = 3/228 (1%) Strand=Plus/Minus Query 130746 AATGATTATTAATGATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCG 130805 |||||| |||| | ||||| || |||| || || | || ||| || ||| | Sbjct 617951 AATGATAATTACAAACCTGAAATTCCCCAGAAAGCACTCTCCTGGTGTATATATTGGAAG 617892 Query 130806 TGAACGGTTCAAAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGT 130865 | | ||||||| ||||| |||||||| || ||||| || || | || || ||||| Sbjct 617891 TATAAGGTTCAATTGATTCATTGTTGCCTAAAATTTGGGCAGTGGAAGCAGTTGGCATTG 617832 Query 130866 ATGCCACTAATAGAGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCC 130925 |||| | ||||||||||||| || || ||| || ||| |||||| |||||| Sbjct 617831 GGGCCATAAGAAGAGAATTACGAACTCCATGTTTCGCAATGTTTGCCTTCAAAACATCCC 617772 Query 130926 AATCCCATAGAGAGGTAGGTTTGACATTGTTCCACATATCAAATTGTA 130973 | ||||| ||| | ||||| ||| ||||||||||| ||||| Sbjct 617771 AGTCCCAGAGATCTGACGGTTTCACA---TTCCACATATCTTGTTGTA 617727 >seq3560 Length=1522174 Score = 86.0 bits (94), Expect = 5e-12 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 27058 CTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAA 27117 |||||||||| ||||| || | | | || | || || | ||| || || || | | Sbjct 971483 CTTTTTGAATGTTGTAATCAGAGAGGGTACGACCATCCTCCAACTGCTTTCCTGCAAAGA 971424 Query 27118 TGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTT 27177 | | | ||| || || || || | ||||||||||| ||||||| |||| | | | Sbjct 971423 TCAATCTCTGCTGGTCAGGAGGAATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTCT 971364 Query 27178 CTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAA 27237 | | |||||||| | ||| ||||| |||||||||| ||| || || || || || || | Sbjct 971363 CAATAGTGTCTGACGGTTCCACTTCAAGAGTTATAGTTTTCCCTGTAAGTGTCTTGACGA 971304 Query 27238 AGATTTGCAT 27247 | |||||||| Sbjct 971303 AAATTTGCAT 971294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424881751424592