Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq3560 141 8e-29 seq7337 109 5e-19 >seq3560 Length=1522174 Score = 141 bits (156), Expect = 8e-29 Identities = 144/188 (77%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| |||||||| || |||||||| || || |||| ||| | |||||||||||||| Sbjct 965685 ATGCAAATATTTGTTAAGACTCTGACTGGAAAAACTATCACTTTGGAAGTGGAACCGTCA 965744 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| ||||| || || ||||| || |||||||| || ||||| ||| Sbjct 965745 GACACCATTGAGAACGTCAAGGCCAAGATCCAAGATAAGGAAGGCATTCCTCCCGACCAA 965804 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | ||| |||||||| ||||||| | ||| |||| ||||| ||| Sbjct 965805 CAGAGATTGATCTTCGCTGGCAAACAGCTGGAAGATGGCAGAACCCTTTCAGATTATAAC 965864 Query 27168 ATTCAAAA 27175 || ||||| Sbjct 965865 ATCCAAAA 965872 Score = 125 bits (138), Expect = 6e-24 Identities = 143/191 (75%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| ||||| || || || ||||| || ||| | || || || |||||||| || || Sbjct 967207 ATGCAAATATTCGTTAAGACACTGACTGGAAAGACCATCACACTGGAAGTGGAGCCATCA 967266 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || || |||||| || |||||||||||||| ||||| || ||| Sbjct 967267 GACACTATTGAGAATGTTAAGGCAAAAATCCAGGACAAAGAAGGCATTCCACCAGACCAA 967326 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || |||| || |||||||| ||||||| | || | || ||||| ||| Sbjct 967327 CAGAGATTGATATTTGCTGGCAAACAGCTGGAAGATGGCCGTACACTCTCTGATTATAAC 967386 Query 27168 ATTCA-AAAGG 27177 ||||| ||||| Sbjct 967387 ATTCAGAAAGG 967397 Score = 118 bits (130), Expect = 9e-22 Identities = 140/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || |||||||| || || || ||||||| |||||||||||||| || Sbjct 965990 ATGCAGATCTTCGTCAAAACTCTTACGGGAAAAACTATTACCCTTGAAGTGGAACCATCA 966049 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || || ||| || || ||||| |||||||| ||||| || || Sbjct 966050 GACACTATTGAAAACGTTAAGGCAAAGATCCAGGACAAGGAAGGCATTCCACCTGACCAG 966109 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || || ||||| |||| || | || |||| ||||| ||| Sbjct 966110 CAGAGATTGATCTTTGCTGGTAAACAGCTGGAGGATGGCAGAACTCTTTCTGATTATAAC 966169 Query 27168 ATTCAAAAGG 27177 || ||||||| Sbjct 966170 ATCCAAAAGG 966179 Score = 118 bits (130), Expect = 9e-22 Identities = 141/190 (74%), Gaps = 1/190 (1%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || |||||||| || || || ||||||| |||||||||||||| || Sbjct 972962 ATGCAGATCTTCGTCAAAACTCTTACGGGAAAAACTATTACCCTTGAAGTGGAACCATCA 973021 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || ||||||||| || || || || |||||||| |||||||| ||||| || || Sbjct 973022 GATACGATTGAGAATGT-TAAGGCAAGATCCAAGACAAGGAAGGCATTCCACCTGACCAG 973080 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || || ||||| |||| || | || | || ||||||||| Sbjct 973081 CAGAGATTGATCTTTGCTGGTAAACAGCTGGAGGATGGCCGAACACTCTCAGATTACAAC 973140 Query 27168 ATTCAAAAGG 27177 ||||| |||| Sbjct 973141 ATTCAGAAGG 973150 Score = 114 bits (126), Expect = 1e-20 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || || || |||| |||||||||||||| ||||| Sbjct 970990 ATGCAGATCTTCGTTAAGACACTTACAGGGAAAACTATAACTCTTGAAGTGGAGCCGTCA 971049 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || || || || |||||||| ||||| || ||||| || ||| Sbjct 971050 GACACTATTGAGAACGTGAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 971109 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || || || || | ||||| | ||| | || ||||||||| Sbjct 971110 CAGAGGTTGATCTTTGCAGGAAAGCAGCTTGAAGATGGCCGAACCCTCTCTGATTACAAC 971169 Query 27168 ATTCAAAA 27175 |||||||| Sbjct 971170 ATTCAAAA 971177 Score = 113 bits (124), Expect = 4e-20 Identities = 141/192 (73%), Gaps = 1/192 (1%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 |||||| || ||||| || || || || || ||| | |||||||| ||||||||||| || Sbjct 967772 CATGCAAATCTTTGTCAAGACACTCACTGGAAAGACAATTACTCTGGAAGTGGAACCTTC 967831 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | ||||||| || || |||||| || ||||| |||||||| ||||| || || Sbjct 967832 AGACACCATTGAGAATGTTAAGGCAAAAATCCAGGACAAGGAAGGCATTCCACCTGACCA 967891 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 ||| | || || | || || ||||| |||| || | || | || |||||||| Sbjct 967892 GCAGAGATTGATCTTTGCTGGTAAACAGCTGGAGGATGGCCGAACACTCTCAGATTACAA 967951 Query 27167 CATTCA-AAAGG 27177 ||| || ||||| Sbjct 967952 CATCCAGAAAGG 967963 Score = 109 bits (120), Expect = 5e-19 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || || || || || |||| |||||||||||||||||||| Sbjct 971294 ATGCAAATTTTCGTCAAGACACTTACAGGGAAAACTATAACTCTTGAAGTGGAACCGTCA 971353 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| || || || || || || ||||| ||||| || || || || Sbjct 971354 GACACTATTGAGAACGTGAAGGCCAAGATCCAGGATAAAGAGGGCATTCCTCCTGACCAG 971413 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | || || | || || || || ||||| || || ||| | || ||||||||| Sbjct 971414 CAGAGATTGATCTTTGCAGGAAAGCAGTTGGAGGATGGTCGTACCCTCTCTGATTACAAC 971473 Query 27168 ATTCAAAA 27175 |||||||| Sbjct 971474 ATTCAAAA 971481 Score = 96.9 bits (106), Expect = 3e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || || ||| ||||||| || ||||| || || || Sbjct 965389 ATGCAGATCTTCGTCAAGACCCTTACAGGGAAGACTATTACCCTCGAAGTTGAGCCTTCT 965448 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | || || ||||||||||| || || || || || ||||| ||| Sbjct 965449 GATACAATTGAAAATGTGAAGGCTAAAATTCAAGATAAGGAGGGAATCCCGCCCGACCAA 965508 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || || ||||| ||||| | || |||| || |||||| Sbjct 965509 CAGAGACTGATTTTTGCTGGAAAGCAATTAGAAGATGGCCGCACACTTTCAGACTACAAC 965568 Query 27168 ATTCAAAA 27175 |||||||| Sbjct 965569 ATTCAAAA 965576 Score = 84.2 bits (92), Expect = 2e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 27027 ACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAA 27086 ||||||||||||||||| || || ||||||||| || || || || || ||||| Sbjct 968970 ACTCTTGAAGTGGAACCATCAGATACGATTGAGAACGTTAAGGCCAAGATCCAGGACAAG 969029 Query 27087 GAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGT 27146 |||||||| ||||| || || ||| | || || | || || || || ||||||| | Sbjct 969030 GAAGGCATTCCACCTGACCAGCAGAGATTGATCTTTGCTGGAAAGCAGCTGGAAGATGGG 969089 Query 27147 TCGACCGTTTCCGATTACAACATTCAAAAGG 27177 || | || ||||||||||| || |||| Sbjct 969090 CGCACTCTCTCTGATTACAACATACAGAAGG 969120 >seq7337 Length=451322 Score = 109 bits (120), Expect = 5e-19 Identities = 117/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || |||||| |||| || ||| | || ||| | ||||| ||| | ||| Sbjct 238310 ATGCAGATCTTCGTTAAAACTTTGACTGGGAAGACCATCACTTTGGAAGTCGAAGCCTCC 238369 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||||| || || |||||||| ||||||||||| || || || ||||| Sbjct 238370 GATACTATTGAGAATGTAAAGGCCAAAATTCAGGACAAAGAAGGAATTCCCCCTGATCAG 238429 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGA 27142 || | || || | ||| |||||||| |||||||| Sbjct 238430 CAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGA 238464 Score = 91.5 bits (100), Expect = 1e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| ||||| ||| | || || || || || || || || Sbjct 239801 ATGCAGATCTTCGTGAAGACTCTTACCGGGAAGACCATCACCCTGGAGGTTGAGCCATCA 239860 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | || ||| ||||||||||||||||| || || ||||| ||||| Sbjct 239861 GACACCATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAGGGTATCCCACCTGATCAG 239920 Query 27108 CAGCG 27112 ||||| Sbjct 239921 CAGCG 239925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434863132744320