Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq3560 91.5 1e-13 >seq3560 Length=1522174 Score = 91.5 bits (100), Expect = 1e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 39095 CTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATA 39154 ||||||| || |||||||| | ||| |||| | || || ||||||||||| || || | Sbjct 965874 CTTTTTGGATGTTATAATCTGAAAGGGTTCTGCCATCTTCCAGCTGTTTGCCAGCGAAGA 965815 Query 39155 TAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG 39214 | | | ||| ||||||| || | || || || || ||| || |||| || Sbjct 965814 TCAATCTCTGTTGGTCGGGAGGAATGCCTTCCTTATCTTGGATCTTGGCCTTGACGTTCT 965755 Query 39215 CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAA 39274 | | || || || ||||| |||| |||||| ||||||| ||||| || ||||||| Sbjct 965754 CAATGGTGTCTGACGGTTCCACTTCCAAAGTGATAGTTTTTCCAGTCAGAGTCTTAACAA 965695 Query 39275 AGATTTGCAT 39284 | |||||||| Sbjct 965694 ATATTTGCAT 965685 Score = 91.5 bits (100), Expect = 1e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 39095 CTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATA 39154 |||| || || |||||||| | ||||| || | || || ||||||||||| ||||||| Sbjct 967396 CTTTCTGAATGTTATAATCAGAGAGTGTACGGCCATCTTCCAGCTGTTTGCCAGCAAATA 967337 Query 39155 TAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG 39214 | | | ||| ||||| | || | || ||||||||| |||||| || | || Sbjct 967336 TCAATCTCTGTTGGTCTGGTGGAATGCCTTCTTTGTCCTGGATTTTTGCCTTAACATTCT 967277 Query 39215 CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAA 39274 | | || || | |||||| |||| ||||| | ||||| ||||| || ||||| | Sbjct 967276 CAATAGTGTCTGATGGCTCCACTTCCAGTGTGATGGTCTTTCCAGTCAGTGTCTTAACGA 967217 Query 39275 AGATTTGCAT 39284 | |||||||| Sbjct 967216 ATATTTGCAT 967207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429492380105558