Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq3560 116 3e-21 seq7337 95.1 8e-15 seq1460 86.0 4e-12 >seq3560 Length=1522174 Score = 116 bits (128), Expect = 3e-21 Identities = 142/191 (74%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || |||||||| || || || ||||| || ||||| || ||||| || | | Sbjct 967207 ATGCAAATATTCGTTAAGACACTGACTGGAAAGACCATCACACTGGAAGTGGAGCCATCA 967266 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||| ||| |||| |||||| | ||||||||||| | || ||||| || Sbjct 967267 GACACTATTGAGAATGTTAAGGCAAAAA-TCCAGGACAAAGAAGGCATTCCACCAGACCA 967325 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | || |||||||| |||||||| |||||||| | || || | ||||| || Sbjct 967326 ACAGAGATTGATATTTGCTGGCAAACAGCTGGAAGATGGCCGTACACTCTCTGATTATAA 967385 Query 23790 CATACAAAAAG 23800 ||| || |||| Sbjct 967386 CATTCAGAAAG 967396 Score = 93.3 bits (102), Expect = 3e-14 Identities = 134/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| ||||| ||||| || ||||||||||| || || || ||||| || | | Sbjct 965989 AATGCAGATCTTCGTCAAAACTCTTACGGGAAAAACTATTACCCTTGAAGTGGAACCATC 966048 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||||| | || ||| || ||||| ||||| | || || || || Sbjct 966049 AGACACTATTGAAAACGTTAAGGCAAAGATCCAGGACAAGGAAGGCATTCCACCTGACCA 966108 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||| || ||||| ||||| || | | ||| | ||||| || Sbjct 966109 GCAGAGATTGATCTTTGCTGGTAAACAGCTGGAGGATGGCAGAACTCTTTCTGATTATAA 966168 Query 23790 CATACAAAA 23798 ||| ||||| Sbjct 966169 CATCCAAAA 966177 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| |||||||| || || || || ||||| || ||||| ||||| || | | Sbjct 970989 AATGCAGATCTTCGTTAAGACACTTACAGGGAAAACTATAACTCTTGAAGTGGAGCCGTC 971048 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 |||||| |||| | | || || || ||||| |||||| | || || || || Sbjct 971049 AGACACTATTGAGAACGTGAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGACCA 971108 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGA----CGAACGCACTTTAGGCGATT 23785 |||| | || || ||||| || || || || ||||| ||||| | || | |||| Sbjct 971109 ACAGAGGTTGATCTTTGCAGGAAAGCAGCTTGAAGATGGCCGAACCCTCTCT----GATT 971164 Query 23786 ACAACATACAAAAAG 23800 ||||||| ||||||| Sbjct 971165 ACAACATTCAAAAAG 971179 Score = 86.0 bits (94), Expect = 4e-12 Identities = 135/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || || || ||||| ||||| || || ||||| ||||| || | | Sbjct 967773 ATGCAAATCTTTGTCAAGACACTCACTGGAAAGACAATTACTCTGGAAGTGGAACCTTCA 967832 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| |||| |||||| | ||||| ||||| | || || || || Sbjct 967833 GACACCATTGAGAATGTTAAGGCAAAAA-TCCAGGACAAGGAAGGCATTCCACCTGACCA 967891 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | || || ||||| || ||||| ||||| || | || || | |||||||| Sbjct 967892 GCAGAGATTGATCTTTGCTGGTAAACAGCTGGAGGATGGCCGAACACTCTCAGATTACAA 967951 Query 23790 CATACAAAAAG 23800 ||| || |||| Sbjct 967952 CATCCAGAAAG 967962 Score = 84.2 bits (92), Expect = 1e-11 Identities = 134/190 (71%), Gaps = 3/190 (2%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| ||||| ||||| || ||||||||||| || || || ||||| || | | Sbjct 972961 AATGCAGATCTTCGTCAAAACTCTTACGGGAAAAACTATTACCCTTGAAGTGGAACCATC 973020 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 || || |||| ||| |||| | || || ||||| ||||| | || || || | Sbjct 973021 AGATACGATTGAGAATGTTAAGGC--AAGATCCAAGACAAGGAAGGCATTCCACCTGACC 973078 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | ||| | || || ||||| || ||||| ||||| || | || || | ||||||| Sbjct 973079 AGCAGAGATTGATCTTTGCTGGTAAACAGCTGGAGGATGGCCGAACACTCTCAGATTACA 973138 Query 23789 ACATACAAAA 23798 |||| || || Sbjct 973139 ACATTCAGAA 973148 Score = 82.4 bits (90), Expect = 5e-11 Identities = 132/190 (69%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||| || || || || || || ||||||||||| | | Sbjct 965389 ATGCAGATCTTCGTCAAGACCCTTACAGGGAAGACTATTACCCTCGAAGTTGAGCCTTCT 965448 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||||| | || |||||| || || || || | ||||| || ||| Sbjct 965449 GATACAATTGAAAATGTGAAGGCTAAAATTCAAGATAAGGAGGGAATCCCGCCCGACCAA 965508 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || ||||| || || ||| | ||||| | ||||| | || |||||| Sbjct 965509 CAGAGACTGATTTTTGCTGGAAAGCAATTAGAAGATGGCCGCACACTTTCAGACTACAAC 965568 Query 23791 ATACAAAAAG 23800 || ||||||| Sbjct 965569 ATTCAAAAAG 965578 >seq7337 Length=451322 Score = 95.1 bits (104), Expect = 8e-15 Identities = 121/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| ||||||||||| | || || || || |||||| | ||||| || || Sbjct 238307 AAAATGCAGATCTTCGTTAAAACTTTGACTGGGAAGACCATCACTTTGGAAGTCGAAGCC 238366 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | || ||| |||| | |||| |||||| ||||||||||| | || || ||| Sbjct 238367 TCCGATACTATTGAGAATGTAAAGGCCAAAATTCAGGACAAAGAAGGAATTCCCCCTGAT 238426 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCAC 23774 || || | || || || || |||||||| ||||||| | ||||| Sbjct 238427 CAGCAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGCCGCAC 238473 >seq1460 Length=1689650 Score = 86.0 bits (94), Expect = 4e-12 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| |||||| | ||||| |||||||| || || || ||||| | || Sbjct 1136790 ATGCAGATTTTCGTAAAAACCTTAACGGGTAAAACGATAACCCTTGAGGTTGAGCCAGCG 1136731 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||||| | || |||||| || |||||||| | || || || || Sbjct 1136730 GACACCATTGAAAATGTGAAGGCTAAAATTCAGGATAAAGAAGGAATTCCACCTGACCAG 1136671 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | | || || || || || ||||| ||||| | | ||| | |||||||| Sbjct 1136670 CAAAGGCTTATTTTCGCTGGAAAGCAACTTGAAGATGGGAGAACTCTTTCAGATTACAAT 1136611 Query 23791 ATACAAAAAG 23800 || || |||| Sbjct 1136610 ATCCAGAAAG 1136601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337967721244328