Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq3560 122 2e-22 seq7337 118 2e-21 seq1460 116 9e-21 >seq3560 Length=1522174 Score = 122 bits (134), Expect = 2e-22 Identities = 144/193 (75%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 151915 CTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCCCGGCGAA 151972 ||||||| ||||||||||| | | |||| |||||||| || ||||| || || || Sbjct 971179 CTTTTTGAATGTTGTAATCAGAGAGGGTTCGGCCATCTTCAAGCTGCTTT--CCTGCAAA 971122 Query 151973 GATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGT 152032 ||| | |||||| ||||| | | || |||||||| ||||| || || || || | Sbjct 971121 GATCAACCTCTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGCCTTCACGTT 971062 Query 152033 CTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCAC 152092 ||| | ||||||| ||| ||||||||||| |||||||| || || || ||||| || Sbjct 971061 CTCAATAGTGTCTGACGGCTCCACTTCAAGAGTTATAGTTTTCCCTGTAAGTGTCTTAAC 971002 Query 152093 GAAGACCTGCATT 152105 ||||| ||||||| Sbjct 971001 GAAGATCTGCATT 970989 Score = 120 bits (132), Expect = 7e-22 Identities = 140/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976 ||||||||||| ||||| | | |||||| ||||| || || ||| || || ||||| Sbjct 966177 TTTTGGATGTTATAATCAGAAAGAGTTCTGCCATCCTCCAGCTGTTTACCAGCAAAGATC 966118 Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036 | ||||||||||| | | || |||||||| || || || ||| || || | || Sbjct 966117 AATCTCTGCTGGTCAGGTGGAATGCCTTCCTTGTCCTGGATCTTTGCCTTAACGTTTTCA 966058 Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096 | ||||||| || |||||||| ||||||||||| ||||| ||||| || |||||| Sbjct 966057 ATAGTGTCTGATGGTTCCACTTCAAGGGTAATAGTTTTTCCCGTAAGAGTTTTGACGAAG 965998 Query 152097 ACCTGCATT 152105 | ||||||| Sbjct 965997 ATCTGCATT 965989 Score = 118 bits (130), Expect = 2e-21 Identities = 140/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 151915 CTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGA 151974 |||| |||||||||||||| | | |||| ||||| || || ||| || || |||| Sbjct 967962 CTTTCTGGATGTTGTAATCTGAGAGTGTTCGGCCATCCTCCAGCTGTTTACCAGCAAAGA 967903 Query 151975 TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCT 152034 | | ||||||||||| | | || |||||||| || || |||||| || ||| ||| Sbjct 967902 TCAATCTCTGCTGGTCAGGTGGAATGCCTTCCTTGTCCTGGATTTTTGCCTTAACATTCT 967843 Query 152035 CTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 | | | |||||||| || ||||| |||||||| || || || ||||| ||||| || | Sbjct 967842 CAATGGTGTCTGAAGGTTCCACTTCCAGAGTAATTGTCTTTCCAGTGAGTGTCTTGACAA 967783 Query 152095 AGACCTGCAT 152104 ||| ||||| Sbjct 967782 AGATTTGCAT 967773 Score = 114 bits (126), Expect = 3e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 151915 CTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGA 151974 ||||||||||||| ||||| | | ||||| |||||||| || ||| || ||||||| Sbjct 965874 CTTTTTGGATGTTATAATCTGAAAGGGTTCTGCCATCTTCCAGCTGTTTGCCAGCGAAGA 965815 Query 151975 TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCT 152034 | | ||||| ||||| | | || |||||||| ||||| || || ||||| ||| Sbjct 965814 TCAATCTCTGTTGGTCGGGAGGAATGCCTTCCTTATCTTGGATCTTGGCCTTGACGTTCT 965755 Query 152035 CTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 | | | ||||||| || ||||| | ||| |||||||| || || |||||||| || | Sbjct 965754 CAATGGTGTCTGACGGTTCCACTTCCAAAGTGATAGTTTTTCCAGTCAGAGTCTTAACAA 965695 Query 152095 AGACCTGCATT 152105 | | |||||| Sbjct 965694 ATATTTGCATT 965684 Score = 111 bits (122), Expect = 4e-19 Identities = 141/192 (73%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 151915 CTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCCCGGCGAA 151972 ||||||| |||||||| || | | || | |||||||||| ||||| || || || Sbjct 965578 CTTTTTGAATGTTGTAGTCTGAAAGTGTGCGGCCATCTTCTAATTGCTTT--CCAGCAAA 965521 Query 151973 GATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGT 152032 || || ||||| ||||| | || |||||| ||||| ||||||||||| || ||| | Sbjct 965520 AATCAGTCTCTGTTGGTCGGGCGGGATTCCCTCCTTATCTTGAATTTTAGCCTTCACATT 965461 Query 152033 CTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCAC 152092 || | | || ||| ||| ||||| || |||||||| || || || || ||||| || Sbjct 965460 TTCAATTGTATCAGAAGGCTCAACTTCGAGGGTAATAGTCTTCCCTGTAAGGGTCTTGAC 965401 Query 152093 GAAGACCTGCAT 152104 ||||| |||||| Sbjct 965400 GAAGATCTGCAT 965389 Score = 107 bits (118), Expect = 4e-18 Identities = 138/189 (73%), Gaps = 1/189 (1%) Strand=Plus/Minus Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATA 151976 || || ||||||||||| | | |||| ||||| || || ||| || || ||||| Sbjct 973148 TTCTGAATGTTGTAATCTGAGAGTGTTCGGCCATCCTCCAGCTGTTTACCAGCAAAGATC 973089 Query 151977 AGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCT 152036 | ||||||||||| | | || |||||||| ||||| || || || ||| |||| Sbjct 973088 AATCTCTGCTGGTCAGGTGGAATGCCTTCCTTGTCTTGGATCTTGCCTTA-ACATTCTCA 973030 Query 152037 ACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAG 152096 | | ||||| || |||||||| ||||||||||| ||||| ||||| || |||||| Sbjct 973029 ATCGTATCTGATGGTTCCACTTCAAGGGTAATAGTTTTTCCCGTAAGAGTTTTGACGAAG 972970 Query 152097 ACCTGCATT 152105 | ||||||| Sbjct 972969 ATCTGCATT 972961 >seq7337 Length=451322 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 || || || ||||||||||| || || ||||| || || || || |||| || || | Sbjct 240217 AGCCTAAGAACAAGATGAAGTGTTGATTCTTTCTGAATATTATAGTCGGACAAGGTACGT 240158 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 ||||| || || || || || ||||| || ||||| ||||| | | ||| || ||| Sbjct 240157 CCATCCTCAAGCTGCTTGCCAGCAAAGATGAGTCTCTGTTGGTCAGGTGGGATACCCTCC 240098 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || ||||| ||||| ||| ||| | || | ||||||| ||| || || || || Sbjct 240097 TTATCTTGGATTTTGGCTTTTACATTTTCAATTGTGTCTGATGGCTCAACCTCCAGGGTG 240038 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || |||||||||||||||| |||||| Sbjct 240037 ATGGTCTTCCCGGTAAGAGTCTTCACGAAGATCTGCAT 240000 >seq1460 Length=1689650 Score = 116 bits (128), Expect = 9e-21 Identities = 142/192 (74%), Gaps = 4/192 (2%) Strand=Plus/Plus Query 151915 CTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCCCGGCGAA 151972 |||| ||||| |||||||| | | ||||||||||||||| || ||||| || ||||| Sbjct 1136601 CTTTCTGGATATTGTAATCTGAAAGAGTTCTCCCATCTTCAAGTTGCTTT--CCAGCGAA 1136658 Query 151973 GATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGT 152032 |||||||| |||||||| | | |||||||| || || |||||||| || ||| | Sbjct 1136659 AATAAGCCTTTGCTGGTCAGGTGGAATTCCTTCTTTATCCTGAATTTTAGCCTTCACATT 1136718 Query 152033 CTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCAC 152092 || | | |||| | ||| || ||||| || || ||||| ||||| | || || || Sbjct 1136719 TTCAATGGTGTCCGCTGGCTCAACCTCAAGGGTTATCGTTTTACCCGTTAAGGTTTTTAC 1136778 Query 152093 GAAGACCTGCAT 152104 ||| | |||||| Sbjct 1136779 GAAAATCTGCAT 1136790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153670512677386