Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq615 125 7e-24 seq3248 84.2 2e-11 >seq615 Length=2534639 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23531 CTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTT 23590 |||| |||| ||| | ||| || ||||| || || || ||||| | ||||| |||| Sbjct 1866952 CTTCGTCCCGCGAAATAAGTTCGTTGGAAAACGTCAAACCAGGCATAAGTCCTCTCTTTT 1867011 Query 23591 TAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGG 23650 | | ||||||||||| |||||||||||| ||||||||||| || || || || ||||| | Sbjct 1867012 TCAGCCAAAATATTGAAGCAAATGATCCCGAAAAGAAAATTCCTTCTACTGCTGCAAATG 1867071 Query 23651 CCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAG 23710 | || | |||| ||| || ||||| ||| | | |||||| | || ||| ||| Sbjct 1867072 CAACCACACGTTCACCGAAACTTGCAGTATCACTTGCAATCCACTGCAATGCCCACGTAG 1867131 Query 23711 CCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAA 23757 ||||| | |||||| | |||||||| || || || |||||| Sbjct 1867132 CCTTCTTTCGAACACACGGTAAGGTTTCAATGGCATTGAATAGAAAA 1867178 >seq3248 Length=433311 Score = 84.2 bits (92), Expect = 2e-11 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 139429 GGTGTCCTACATACAAAATTTTGGATTGTTGATAATAAACATATATATATTGGAAGTGCT 139488 || ||||| ||||| || |||||| | || |||| || ||| | ||| ||||||||||| Sbjct 46931 GGAGTCCTTCATACGAAGTTTTGGCTGGTGGATAGAAAGCATTTTTATGTTGGAAGTGCT 46872 Query 139489 AACATGGACTGGCGATCACTAACTCAAGTAA 139519 |||||||| ||| |||| || ||||| |||| Sbjct 46871 AACATGGATTGGAGATCTCTTACTCAGGTAA 46841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521421731912400