Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ladona_20fulva_20[genbank_20GCA_5F000376725.1_202013-04-23] 10,166 sequences; 1,158,111,285 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq3560 105 6e-18 seq7337 87.8 2e-12 >seq3560 Length=1522174 Score = 105 bits (116), Expect = 6e-18 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 41675 TTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATC 41734 |||||||||||||| || ||||| || || | || || ||||| ||||| || |||||| Sbjct 967394 TTCTGAATGTTATAATCAGAGAGTGTACGGCCATCTTCCAGCTGTTTGCCAGCAAATATC 967335 Query 41735 AGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC 41794 | | ||||||||| | |||| || || |||||| ||||||| ||| | | Sbjct 967334 AATCTCTGTTGGTCTGGTGGAATGCCTTCTTTGTCCTGGATTTTTGCCTTAACATTCTCA 967275 Query 41795 ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAA 41854 | |||||| | |||||| |||| || || || || || ||||| ||||| ||||| Sbjct 967274 ATAGTGTCTGATGGCTCCACTTCCAGTGTGATGGTCTTTCCAGTCAGTGTCTTAACGAAT 967215 Query 41855 ATCTGCAT 41862 || ||||| Sbjct 967214 ATTTGCAT 967207 >seq7337 Length=451322 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || ||||| || || || |||||||| ||||||||||| | ||| || | || || Sbjct 240208 ACAAGATGAAGTGTTGATTCTTTCTGAATATTATAGTCGGACAAGGTACGTCCATCCTCA 240149 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||||||||| || || || || | ||||||||| | || | | |||||| | | || Sbjct 240148 AGCTGCTTGCCAGCAAAGATGAGTCTCTGTTGGTCAGGTGGGATACCCTCCTTAT-CTTG 240090 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 |||| |||| || | | ||||| | ||| ||||||| || || || || Sbjct 240089 GATTTTGGCTTTTACATTTTCAATTGTGTCTGATGGCTCAACCTCCAGGGTGATGGTCTT 240030 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || ||||| ||||| |||||||| Sbjct 240029 CCCGGTAAGAGTCTTCACGAAGATCTGCAT 240000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462245252719200