Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq59246 325 5e-84 seq157294 223 4e-53 seq10486 210 3e-49 seq229742 86.0 7e-12 seq55316 86.0 7e-12 >seq59246 Length=1357 Score = 325 bits (360), Expect = 5e-84 Identities = 705/1046 (67%), Gaps = 18/1046 (2%) Strand=Plus/Plus Query 53528 TCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCT 53587 ||||| | || |||||||||||||||||||| | || ||| |||| || ||| ||| Sbjct 83 TCTGCCATACCCTGAACACCAATACCGATAGGACGGTGCCTCATATTTGAAGTTTTTGCT 142 Query 53588 TCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTC---TGACAATTACT 53644 || || | ||||||| | |||| ||| || | ||| || | ||| | ||||| || Sbjct 143 TCAGGGACAGGATAAAAGTTAACATCAATGACTTTGTTTAAATTTTGAGTCACAAT--CT 200 Query 53645 TTGACCACATCCTTCAGTTTGAGAAAATCAAATTGTCCATCTATTACAAACATGTTCAAT 53704 | | || || | ||| ||||| |||||| || | ||||||||||| | | Sbjct 201 TAGTGGTT-TCTTTTAATTTTTTAAAATGAAATTGATTATTTTCAACAAACATGTTAAGT 259 Query 53705 GCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 53764 || || || || || || || || || || ||||| | | ||||| | | |||| Sbjct 260 GCTATGGAAGCAAGGTTGCACACTGCCACTTCATTTTCTGAAGTGTATTGCACAACCTCA 319 Query 53765 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 53824 ||||||||||| ||||| || || || || | ||||| |||||||||||| |||| || Sbjct 320 GTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTCCTGTTGCAA 379 Query 53825 GCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTC 53884 ||||||||||| | || |||| |||||||| || | || | ||||||||| | ||| Sbjct 380 GCATCCTTATACAACATATATGGTGTACCAGTCTCCACTTGAGCTTCTATAATTGACTTC 439 Query 53885 CAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTT--TCGTATAGTGTAT 53942 || | | |||| | | | | ||| || | ||| |||| || ||| | || Sbjct 440 CATAACTCTTGAGCTCTGACTT--GTTTTATAAACCGTTTTTCTTCTTCATATTTGGCAT 497 Query 53943 ACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAAT-CCAGGACATTCATCCGGACAC 54001 | | | ||| || || ||||| || || | ||| || ||||| |||| |||||| Sbjct 498 ATAGTTCTTCGAATTCCTCTCCATAA-CAGTCAGCAAGGCCGGGACAATCATGAGGACAC 556 Query 54002 ATCAACGACCACTCTCCGTCATCCTTCACT---CGTTTCATAAAGAGATCAGGAATCCAA 54058 || | ||| ||| |||||||| || | ||||||||| ||||| || ||||| Sbjct 557 ATGAGACTCCAATCT---TCATCCTTTTCTACCCTTTTCATAAACAGATCTGGTATCCAT 613 Query 54059 AGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCG 54118 | ||| ||| || ||||| | || ||| || || ||||| |||||||| | ||| Sbjct 614 AAAGCATAAAACAGTTCTCTAGCTCGCATTTCTTCCTTACCTGTGTTCTTTTTTAAATCT 673 Query 54119 AGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGT 54178 | |||| | | || || | |||||| ||||| ||||| || | | | || || ||| Sbjct 674 AAGAACTCAAATATGTCCGCATGCCAAGGTTCTAAGTAAATTGCAAATGCACCGGGACGT 733 Query 54179 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 54238 ||||| || || ||||||| ||||| || || || || || |||||||||||||| | Sbjct 734 TTGTTGCCACCTTGATCTACATATCTGGCAGTATTGTTGTACACTCTCAACATTGGCACT 793 Query 54239 ATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTA 54298 | |||||| || | ||||| || || | ||||| || || | |||| | Sbjct 794 AGACCATTCGAAACCCCATTAGTGCCAGCTATATAAGACCCTTGAGCTCTAATACAATGT 853 Query 54299 ATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCA 54358 | || |||||| || ||||| |||||| |||||||| ||| ||||||| |||||| Sbjct 854 GTATGTAAACCTATGCCACCTGCAGATTTAGAAATTAATGCACATTGTTTTAAAGTATCA 913 Query 54359 TAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGA 54418 | || || || |||||||| || |||| | || || ||| || | || | Sbjct 914 AAAATACCTTCAATACTATCGTCTTTCATAGCTATAAGGAAGCAGGAGGAAAGCTGTGGC 973 Query 54419 CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGT 54478 || || | || || || ||||| || || ||||| |||| || || | Sbjct 974 CGCGGTGTAGCTGCTGAGAACAATGTAGGGCTTGCATGTGTAAAATATTTCTCTGACATC 1033 Query 54479 AGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGC 54538 | ||| || || | ||| || || || || |||||| ||||| | ||| | | Sbjct 1034 ATATTATAAGTATTGATTGCACTATCAATGTCTTCACCATGAATCCCTACGGAGACTCTC 1093 Query 54539 ATTAACATGTGCTGAGGTCTTTCAAC 54564 || | |||||| |||||||||||||| Sbjct 1094 ATAAGCATGTGTTGAGGTCTTTCAAC 1119 >seq157294 Length=2047 Score = 223 bits (246), Expect = 4e-53 Identities = 519/779 (67%), Gaps = 9/779 (1%) Strand=Plus/Plus Query 53384 CCTACATATGTATCGTATGGTCC---TTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 53440 ||| |||||| ||||||||||| ||| ||| || | |||| || | || || Sbjct 750 CCTTCATATGATTCGTATGGTCCAAATTCTTTC---GCCAATTCAACGCTTTCTTCCAAG 806 Query 53441 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 53500 ||| |||| || ||||| || || || ||||| ||| |||||| | || ||| Sbjct 807 GCAGAAAAATACATCGTTTCAAATATTTTTGAATTTAAGTCTCTTGCTTCTTGACTGTCA 866 Query 53501 AATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGT 53560 || | ||| | | || ||| || ||||||| ||| || | |||||| || |||||| Sbjct 867 AACGCATATCTCATAAGGCAAAATGCATCTGCTAGTCCCTGTATACCAATTCCTATAGGT 926 Query 53561 CTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 53620 || |||||| ||||| || | |||| || ||||||| | | |||||||| | Sbjct 927 CTGTGTCTCATATTACTTCTTCTACATTCTTCAACAGGATAAAATGTTGTATCTATACAT 986 Query 53621 TTATTGAGGTTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTGT 53680 | || || ||||| ||||||||| || || | | ||||| ||| ||||||| | Sbjct 987 CTGTTAAGATTTCTTGTAATTACTTTAACTACTTGCGATAGTTTTTCAAAGTCAAATTTT 1046 Query 53681 CCATCTATTACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTA 53740 |||| || ||||| | ||| ||| |||| ||||||||| |||| ||||| Sbjct 1047 TCATCAATGACAAATTTTGACAAACAAATGCTCGCCAAATTACAAACTGCTATTTCATTT 1106 Query 53741 GCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTT 53800 || | ||||| || || || | |||||||| | | || || || ||||||||| Sbjct 1107 TTGTCAGAATATTCGATAATTTCCGCACAAAGATTTGAAGATTTTATTGTACCTAAATTT 1166 Query 53801 TGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCA 53860 ||||||||||| ||||||| | || |||||||| || | || ||||| ||||| Sbjct 1167 TGTTGATTACTTAGCCTGTTACAAGTGTCTTTATAAAGCATATAAGGTGTACCCGTTTCT 1226 Query 53861 ATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTC 53920 | || | ||||||||| |||||||| | | ||| |||| | || || ||| | Sbjct 1227 AATTGTGCTTCTATAATGGCTTTCCATAACTTTCTAGCTTTTACAACAG--TTCTAT-TT 1283 Query 53921 TTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAAT 53980 ||| | |||| ||| ||| ||| | ||| || ||||||||||||| || | Sbjct 1284 TTTATTTTTTCATATTTGCAATATAATTTATTAAAATCTTCTCCCCAAACATCATCTAGA 1343 Query 53981 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 54040 || || | ||||| | || ||||||||| | | | | ||||||| |||| Sbjct 1344 CCTTTTGCCTCGTTTGGACAGAATAAAGACCACTCTTCATTTTTATCTACTCGTTCCATA 1403 Query 54041 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 54100 || | ||| ||||| | |||||| || | ||||| | |||| || || | | Sbjct 1404 AATAAGTCATTTATCCATAAAGCTATGAAAACGTCTCTAGCTCTAATGTCTTCACTGCTG 1463 Query 54101 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATAT 54159 ||||| ||| | | ||| | ||| | | ||| || ||||| ||||| || || || Sbjct 1464 GTATTTTTTCTTAAATCTAAGAAATCGAAAATGTCTTTGTGCCAAGGTTCTAAATAAAT 1522 >seq10486 Length=2602 Score = 210 bits (232), Expect = 3e-49 Identities = 462/685 (67%), Gaps = 13/685 (2%) Strand=Plus/Plus Query 52790 ATTTTATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAG 52849 |||||| | ||||| | || || ||||| | | | ||| ||||| || ||| ||| Sbjct 1921 ATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGTGTAAGTAG 1980 Query 52850 TACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAA 52909 |||||||| ||||||| ||| | |||| ||| ||||| || |||||||| | Sbjct 1981 TACATTCCTGTTTTTAAACCCATCTTCCAAGCGTGGAAATGAATCGACGTTAGTTTCCCA 2040 Query 52910 TAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTG 52969 || | || | || | ||| || || | |||||||||||| || || || || || || Sbjct 2041 TAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAATGCCCCTCTA 2100 Query 52970 TCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCG 53028 || || ||||| | |||| || || ||| ||| ||||| | ||||| || || || Sbjct 2101 TCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTATAAATCT 2160 Query 53029 CTTAATATCTTCTGGAAGGTTTGTA--TTCT-GAATAGATCCACCATCTACCATAATCCT 53085 |||| | |||| || | ||| | |||| | ||||||||| | ||||| Sbjct 2161 CTTATT-TCTTTAGGGATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAAG 2219 Query 53086 ATTCTTGATCTCATCATTCCATAATTTTCTCTCG-GTTAAAACTCTAAGGAGATGCGGAT 53144 ||| || || || |||| |||||| | || | || ||| | | || ||||| | | Sbjct 2220 ATTTTTCATATCTTCATCCCATAAATCAG-CTAGAGTCAAATCAGTCAGAAGATGATGGT 2278 Query 53145 TAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTT 53204 | ||||| ||||||||||||| || ||||| | ||||||||| ||| | |||| Sbjct 2279 TCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAATGGTT 2338 Query 53205 CCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCA 53264 | | ||| ||| | || || | |||||| ||||| || ||||||||||||||||| | || Sbjct 2339 CAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGTGCTATCA 2398 Query 53265 ATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCA 53322 ||| | ||| | | ||| ||||| || || || ||||| || |||| ||||| Sbjct 2399 ATAGAGAATTCCGCAAACC--ATGTTTTGCTATCTTTTCTTTGAGGACAGCCCAGTTCCA 2456 Query 53323 AAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACG 53381 ||| || | || || || ||||| | || || | || Sbjct 2457 AAGGTCTGTAGGAGTTTTGACCCACATATCATACTGGAGGATACCTTGGCTAGCTGGAC- 2515 Query 53382 ATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATG 53441 |||| |||||| ||||| ||||| || || |||| ||||||||| || ||||||| Sbjct 2516 TTCCTTGATATGTGCTGTATGCGCCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATG 2575 Query 53442 CACCGTAATAAATGGTTTCGAAGAT 53466 |||| |||||||| ||||| || || Sbjct 2576 CACCATAATAAATTGTTTCAAATAT 2600 >seq229742 Length=505 Score = 86.0 bits (94), Expect = 7e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 54779 ttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCC 54838 || || || ||||| |||| ||| |||| |||||||| || || | |||||||||||| Sbjct 250 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCA 309 Query 54839 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCAATTCTACCGTT 54898 ||||| | ||| || ||| ||||| ||||| || | ||| | || | || | ||| Sbjct 310 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 369 Query 54899 GTTACTCCATTATATATTCC 54918 ||||| ||| |||||| || Sbjct 370 GTTACACCAGAATATATGCC 389 >seq55316 Length=1040 Score = 86.0 bits (94), Expect = 7e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 24621 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 24680 ||||||| || |||||||| | |||||||| ||||| || || ||||||||||| | | Sbjct 466 TTAGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 407 Query 24681 CAGATGTCATGATATTGAATTGGAAAAATAACAAA 24715 || ||||| ||||||| ||||| || ||||| || Sbjct 406 CATATGTCTGGATATTGGATTGGGAATATAACGAA 372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591698211630240