Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq51813 217 1e-51 seq49094 113 4e-20 seq38040 107 2e-18 seq60889 89.7 4e-13 seq22409 84.2 2e-11 seq80369 82.4 7e-11 >seq51813 Length=3444 Score = 217 bits (240), Expect = 1e-51 Identities = 353/504 (70%), Gaps = 8/504 (2%) Strand=Plus/Plus Query 105997 GGGTTAGCCCCTTTGCCGCCCGGAAACTCCCAATCGATGTCTACACCGTCAAAGAATTTC 106056 |||||||| |||||||| || ||||||||||||||||| |||||||| || ||||||||| Sbjct 843 GGGTTAGCACCTTTGCCACCAGGAAACTCCCAATCGATATCTACACCATCGAAGAATTTC 902 Query 106057 CACACTTGCAGAAATTCCTTAACCGAATCTACAAAAACGT-TTCTTTT---TTCAACATC 106112 || | | ||||| ||||| || || | ||||| ||| |||| || || | || | Sbjct 903 CATGTTAGAAGAAACTCCTTTACTGACTGCACAAAT-CGTGTTCTCTTAGATTTATCAAC 961 Query 106113 GTGCATAAAATAAAATGGGTCTGATAGAGTCCAGCCTCCTATTGAAGGAAGAATTTTTAA 106172 | ||| |||| || || | || ||||| || || || || |||||||| || || Sbjct 962 T---AAAAAGAAAAAAGGATCGGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTCAA 1018 Query 106173 ATGGGGGTTTGCTAATTTTGCCGCCATCAACTGTCCAAAATTGCCTTTATACGGCTCGTT 106232 | ||| ||| |||| | ||| || || || || |||||||| || |||||||| Sbjct 1019 TTCCGGGCGGGCTTGTTTTAGTGACATTAATTGGCCGAAGTTGCCTTTGTAGGGCTCGTT 1078 Query 106233 CCAAGCGGACACACCTTTTTGGGGTTTTTGTACGGCGGCCCACGGATCGTGAATGGCAAC 106292 ||| | |||| |||||||| |||||||||| || ||||| |||||||| || | || Sbjct 1079 CCATGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGAC 1138 Query 106293 TTTGAAATCTTCGCGTCCCTTGCACGATCTTTGCAAAGATTCAAAGCTTCCGGGTATCGT 106352 ||| || || || || || | || || | ||||| | || || || || ||| Sbjct 1139 TTTAAAGTCCTCACGGCCGCTACAGGACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTC 1198 Query 106353 TTTGAGGGCGTCGTTTATTCCATCGCCGCCGCAGATGGGTATGAAACCATACAACAAGTG 106412 ||| | | ||| ||||| || || |||||||| ||||| || || ||||| | ||| || Sbjct 1199 TTTTAAGCTGTCATTTATGCCGTCACCGCCGCAAATGGGAATAAAGCCATAGAGCAAATG 1258 Query 106413 TGATAAATTTGGCAAGGGAACTTTGTCTACGGGAAAGTTGCGCCCGTACACACCCCACTC 106472 | | ||| || | || | || ||||| || || | || |||||||| || Sbjct 1259 AGTAAGATTAGGTATAGGTATACGATCCACGGGGAACTTTCTAGGATAGACACCCCATTC 1318 Query 106473 AACAAAGTACGCAGCGACAATTTT 106496 || ||||| || | |||| ||| Sbjct 1319 TACGAAGTAGGCGCCCACAACTTT 1342 >seq49094 Length=1117 Score = 113 bits (124), Expect = 4e-20 Identities = 157/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 ||||||||| || | || ||| |||| ||||| || || || ||| |||| | | Sbjct 228 AATGCAAATTTTTGTAAAGACACTGACAGGCAAGACTATCACACTGGAAGTGGAAGCTTC 287 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 || || | | || ||||| ||||||| |||||||| || | ||| |||||| Sbjct 288 TGATACAATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAGGGCATTCCCCCAGATCA 347 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTAC 29138 |||||||||||| ||||| || || || || |||||| | | ||||| | || ||| Sbjct 348 ACAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTAT--CTGACTAC 405 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTTACG 29176 ||||||||||||||||||||| | ||| | || |||| Sbjct 406 AATATTCAGAAGGAATCTACTTTGCACTTAGTACTACG 443 Score = 105 bits (116), Expect = 6e-18 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 ||||||||| || | || ||| |||| |||||||| ||||| ||| |||| | | Sbjct 456 AATGCAAATTTTTGTAAAGACACTGACTGGCAAAACGATTACATTGGAAGTGGAAGCTTC 515 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 || || | | || ||||| ||||||| || ||||||||| | || || || Sbjct 516 TGATACAATAGAAAATGTTAAGGCAAAAATTCAAGACAAAGAAGGTATTCCTCCCGACCA 575 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 ||| || ||||| ||||| || ||||| || |||||| || || | ||||| || Sbjct 576 ACAGAGGCTTATTTTTGCAGGAAAACAGCTAGAAGATGGTCGTACGCTGTCAGATTATAA 635 Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTG 29171 ||||||||||||||| ||| | ||| ||||| Sbjct 636 TATTCAGAAGGAATCAACTTTGCACTTGGTG 666 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 ||||||||| || | || ||| |||| ||||| || || || ||| |||| | | Sbjct 684 AATGCAAATTTTTGTAAAGACACTGACAGGCAAGACTATCACACTGGAAGTGGAAGCTTC 743 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 || || | | || ||||| ||||||| |||||||| || | ||| |||||| Sbjct 744 TGATACAATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAGGGCATTCCCCCAGATCA 803 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 |||||||| || ||||| || || || || |||||| || || | || ||||| Sbjct 804 GCAAAGACTAATTTTTGCTGGAAAGCAGCTCGAAGATGGACGTACACTGTCAGACTACAA 863 Query 29141 TATTCAGAAGGAATCTAC 29158 |||||||||||||||||| Sbjct 864 TATTCAGAAGGAATCTAC 881 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| || | |||||| |||| |||||||| || || ||| |||| | | Sbjct 1 ATGCAAATTTTTGTTAAAACACTGACCGGCAAAACTATCACATTGGAAGTGGAAGCTTCT 60 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | ||| ||| ||| || || ||||| | || ||||||| Sbjct 61 GATACAATCGAGAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAA 120 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 |||||| | || || || || || |||||||||||| || || | || || ||| Sbjct 121 CAAAGATTAATTTTCGCCGGAAAGCAACTGGAAGATGGACGCACACTGTCAGACTATAAT 180 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACG 29176 |||||||||||||| ||| | ||| ||||| |||| Sbjct 181 ATTCAGAAGGAATCGACTTTGCACTTGGTGCTACG 215 >seq38040 Length=2861 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||||||||| | ||||||||||| || || ||||||||| ||| ||||| | Sbjct 2007 ATGCAAATATTTGTGAAAACATTGACAGGAAAGACCATTACCCTGGAAGTAGAACCATCT 1948 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | ||| ||||| ||||| ||||| | ||| ||| ||| Sbjct 1947 GACACAATCGAGAATGTGAAGGCTAAAATACAGGATAAGGAAGGCATCCCCCCAGACCAA 1888 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || | || || ||||| || || ||| |||||||| ||| || | ||||||||| Sbjct 1887 CAGCGTCTCATATTTGCTGGTAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAAT 1828 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 |||||||| || || || |||||| |||| | || | |||||||| Sbjct 1827 ATTCAGAAAGAGTCCACCCTTCACTTGGTACTCCGTCTGCGAGGAGG 1781 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||||||||| |||| ||| | || || || ||||| || || ||| || | Sbjct 2463 ATGCAAATATTTGTCAAGACACTAACAGGAAAGACCATAACTCTAGAGGTGGAGCCATCT 2404 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | ||| ||||| || ||||||||| | || ||||||| Sbjct 2403 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGTATCCCTCCAGATCAA 2344 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTACA 29139 ||| | ||||||||||| || || ||| |||||||| || | |||| | || |||| Sbjct 2343 CAACGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTAT--CTGACTACA 2286 Query 29140 ATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||||||| || |||||||| |||||| | || | || || |||||||| Sbjct 2285 ATATTCAAAAAGAATCTACCCTTCACCTAGTACTGCGTTTGCGAGGAGG 2237 Score = 89.7 bits (98), Expect = 4e-13 Identities = 88/112 (79%), Gaps = 4/112 (4%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 || ||||||||| | ||| ||| ||||| || || || ||||| || |||||||||||| Sbjct 2826 GACAAAGAAGGTATTCCCCCAGACCAACAGAGGCTCATTTTTGCTGGAAAACAACTGGAA 2767 Query 29115 GATTCCA--AAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCA 29164 ||| | | ||||| | ||||| |||||||| |||||||||||||| || Sbjct 2766 GATGGCCGTACACTAT--CTGATTATAATATTCAAAAGGAATCTACTCTACA 2717 >seq60889 Length=898 Score = 89.7 bits (98), Expect = 4e-13 Identities = 88/112 (79%), Gaps = 4/112 (4%) Strand=Plus/Plus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 || ||||||||| | ||| ||| ||||| || || || ||||| || |||||||||||| Sbjct 638 GACAAAGAAGGTATTCCCCCAGACCAACAGAGGCTCATTTTTGCTGGAAAACAACTGGAA 697 Query 29115 GAT--TCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCA 29164 ||| | | ||||| | ||||| |||||||| |||||||||||||| || Sbjct 698 GATGGCCGTACACTAT--CTGATTATAATATTCAAAAGGAATCTACTCTACA 747 >seq22409 Length=1756 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 28953 AGTGTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACG 29012 ||| | | ||||||||| ||| |||| || | ||||| |||||||||||| ||| | Sbjct 1672 AGTCTCACAATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTG 1613 Query 29013 GAACCCGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCC 29072 ||| || | || || | | || | || |||||| ||||| |||||| | || Sbjct 1612 GAAGCCTCTGATACTATAGAAAATGTAAAAGCGAAAATTCAAGATAAGGAAGGTATTCCA 1553 Query 29073 GTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCC 29132 ||| || ||| | | |||||||| || ||||| || |||||| || || | Sbjct 1552 CCAGACCAGCAACGTTTGATCTTTGCTGGTAAACAGCTAGAAGATGGACGTACATTGTCT 1493 Query 29133 GATTACAATATTCAGAAGGAATCTAC 29158 || ||||| ||||| |||||||| || Sbjct 1492 GACTACAACATTCAAAAGGAATCCAC 1467 >seq80369 Length=3501 Score = 82.4 bits (90), Expect = 7e-11 Identities = 89/117 (76%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 29075 AGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGA 29134 |||||| || || ||||||||||| || || ||||| || ||| | | ||| | | || Sbjct 306 AGATCAGCAGAGGCTTATCTTTGCTGGTAAGCAACTCGAGGATGCTAGAACGCTATCTGA 365 Query 29135 TTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGGTA 29191 ||||||||| ||||||||| ||| || || | |||||| || |||| || ||||| Sbjct 366 TTACAATATCCAGAAGGAAAGTACACTGCATCTTGTGTTAAGACTACGTGG-GGGTA 421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426912735579890