Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq51813 208 6e-49 seq89394 125 6e-24 seq49094 98.7 8e-16 seq38040 95.1 1e-14 seq98588 89.7 4e-13 seq22409 89.7 4e-13 seq5483 86.0 5e-12 >seq51813 Length=3444 Score = 208 bits (230), Expect = 6e-49 Identities = 488/725 (67%), Gaps = 15/725 (2%) Strand=Plus/Plus Query 102323 TTGGACCACGCGCCCTTAAAATCGTAACTCATGAGGAATATTTTATCAAGGAACCTTTGA 102382 || ||||| || ||||| || || || ||||| | ||| || | ||| | | ||||| Sbjct 621 TTTGACCAGGCTCCCTTGAAGTCATAGCTCATCAAGAAAATATGATCCATATAATTTTGA 680 Query 102383 GCCGCGTCGTACTTCACCACGGCAATTTTGTCGTAGCCCGAACTAATCGCGCTCGTCAGC 102442 ||| | |||| | || || ||||| || | || || ||||| || |||| Sbjct 681 GCCTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGAGCTAATAGCAGAAGTCAAT 740 Query 102443 TCGTACGTCTTGTTCGTTTGCAGCTGC-AGTTCGTCCAGCATGGCGCGCAACTCTTTCAG 102501 ||||| ||||| | || ||||| || || || ||||| | || || ||||||| Sbjct 741 TCGTATTTCTTGC-CATTCTTAGCTGAGAGCTCATCGAGCATCTCACGTAATTCTTTCAT 799 Query 102502 CAAAACAAGGTACGTGTCGGCGTCGCGCTCGCCGTTGCCGAGCGCCGGGTTGGCGCCCTT 102561 |||| | || || | || || | | | ||||| | ||||| || || || Sbjct 800 CAAACTTACATAGCAATCACCATCTT-CTGGGC--TACCGAGGTCAGGGTTAGCACCTTT 856 Query 102562 GCCGCCCGGAAACTCCCAATCGATGTCCACCCCGTCGAAAAACTTCCACACCTGCAAAAA 102621 ||| || ||||||||||||||||| || || || ||||| || ||||| | | ||| Sbjct 857 GCCACCAGGAAACTCCCAATCGATATCTACACCATCGAAGAATTTCCATGTTAGAAGAAA 916 Query 102622 CTCTTTAACGGATTCGACAAACACGCGC-CGCTTGTCCGCGTCGTGCATGAAATAGAAC- 102679 ||| || || || | ||||| || | | ||| | | | | ||| |||| Sbjct 917 CTCCTTTACTGACTGCACAAAT-CGTGTTCTCTTA---GATTTATCAACTAAAAAGAAAA 972 Query 102680 --GGGTCGGACAGCGTCCAGCCGCCAATGGACGGCAGGATTTTCAAATGCGGGTTTGCCA 102737 || |||| |||||||| || ||||| || || || || ||||| | |||| || Sbjct 973 AAGGATCGGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTCAATTCCGGGCGGGCTT 1032 Query 102738 GCTTGGCCGCCATCAACTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGCGGATACGC 102797 | || | ||| || ||||| |||||||||||||||||||||||||||| || | | Sbjct 1033 GTTTTAGTGACATTAATTGGCCGAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAATC 1092 Query 102798 CCTTTTGCGGCTTTTGTATGGCGGCCCACGGGTCGTGGATAGCGACCTTAAAGTCTGCGC 102857 | ||||| || ||||||| || ||||| || |||||||| | ||| |||||||| | | Sbjct 1093 CTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTAAAGTCCTCAC 1152 Query 102858 GGCCTTTGCACGAGCGCTGCAGCGCTTCAAAACTGCC-GGGAATGGTCTTGAGCGCGTCG 102916 |||| | || || || ||||| |||| |||||||| || | || ||| ||| Sbjct 1153 GGCCGCTACAGGACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAGC-TGTCA 1211 Query 102917 TTTAGCCCGTCGCCGCCGCAAATCGGGATGAAGCCGTACAGCAGATGGGACAGGTTGGGC 102976 |||| ||||| ||||||||||| || || ||||| || |||| ||| | || || || Sbjct 1212 TTTATGCCGTCACCGCCGCAAATGGGAATAAAGCCATAGAGCAAATGAGTAAGATTAGGT 1271 Query 102977 AGCGGCACTTTGTCCACCGGAAAGCCGCGGCCGTACACGCCCCACTCTACGAAATACGCG 103036 | || | ||||| || || | || || ||||| |||||||| || ||| Sbjct 1272 ATAGGTATACGATCCACGGGGAACTTTCTAGGATAGACACCCCATTCTACGAAGTAGGCG 1331 Query 103037 GCCAC 103041 |||| Sbjct 1332 CCCAC 1336 >seq89394 Length=1369 Score = 125 bits (138), Expect = 6e-24 Identities = 107/132 (81%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 29354 CGCACAAACGGACACTGCGGCGCCCACCGCTTGTGGTCCGTTTCCGGGTCGTCGCCCCTT 29413 |||| || ||||| || ||||||||||| | ||||||| | | || ||||||||| | Sbjct 527 CGCAGGAAGGGACATTGGGGCGCCCACCGTTGGTGGTCCTTGGCGGGATCGTCGCCCGCT 468 Query 29414 ACCCAATTCGTAATCTCTACCTTGCAAAACGCGCAGCGCACCTCGTCGCCGCGGCCCAAG 29473 ||||| ||| |||| ||||| || |||||||||||||| || || ||||||||||||| | Sbjct 467 ACCCATTTCATAATTTCTACTTTACAAAACGCGCAGCGTACTTCATCGCCGCGGCCCAGG 408 Query 29474 TAGTAGAACCCG 29485 || ||||| ||| Sbjct 407 TAATAGAAGCCG 396 >seq49094 Length=1117 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||||| |||||||| || ||||| ||||| |||||||| | ||| || | | || Sbjct 212 AGCACCAAGTGCAAAGTCGATTCCTTCTGAATATTATAGTCTGACAGTGTGCGTCCATCT 153 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 ||||| || || || || |||| | ||| || || || || | |||||||||||| Sbjct 152 TCCAGTTGCTTTCCGGCGAAAATTAATCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCT 93 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| || || | ||| |||||| | ||| ||||| || || || Sbjct 92 TGAATCTTTGCCTTTACGTTCTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATAGTT 33 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||||||| | ||||| ||||| |||||||| Sbjct 32 TTGCCGGTCAGTGTTTTAACAAAAATTTGCAT 1 >seq38040 Length=2861 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||||||| | ||| |||| || | |||||||| || ||||| || || || | | Sbjct 1781 CCTCCTCGCAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGAATATTGTAATCAGAC 1840 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || | | || |||| || || || ||| | || || | ||| ||||| ||| Sbjct 1841 AAAGTGCGACCATCTTCCAATTGCTTACCAGCAAATATGAGACGCTGTTGGTCTGGGGGG 1900 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||| || || || ||||| | ||| || ||| || || | Sbjct 1901 ATGCCTTCCTTATCCTGTATTTTAGCCTTCACATTCTCGATTGTGTCAGATGGTTCTACT 1960 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| |||||||||||| || || || ||||| |||||||||||||| Sbjct 1961 TCCAGGGTAATGGTCTTTCCTGTCAATGTTTTCACAAATATTTGCAT 2007 >seq98588 Length=355 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 20967 ACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCC 21026 |||| || | ||| || || ||||||||||| ||||| | || || | | || ||| Sbjct 322 ACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGAGTGCGACCATCTTCC 263 Query 21027 AGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCG 21086 | || || || ||| | ||||| | |||||| || || | ||| || ||||| | Sbjct 262 AATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTCTTGG 203 Query 21087 ATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTG 21146 || || ||| || | | | ||||||| ||| ||| ||||| ||||||||||| Sbjct 202 ATTTTAGCTTTTACGTTTTCAATAGTATCAGAGGGTTCCACTTCCAGAGTAATGGTCTTT 143 Query 21147 CCGGTTAACGTTTTGACAAATATTTGCAT 21175 || |||| ||||| ||||| || ||||| Sbjct 142 CCAGTTAGGGTTTTAACAAAAATCTGCAT 114 >seq22409 Length=1756 Score = 89.7 bits (98), Expect = 4e-13 Identities = 150/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||| | |||||| ||||| |||||||||||||| ||||| | || || | | || Sbjct 1452 AGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCT 1511 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || |||||||| || ||| | || | | |||||||| || | |||||||| || Sbjct 1512 TCTAGCTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCT 1571 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 || || ||| || | | | ||||||| || ||| || | ||||||||| Sbjct 1572 TGAATTTTCGCTTTTACATTTTCTATAGTATCAGAGGCTTCCACCTCGAGGGTAATGGTT 1631 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGA 21180 || || || | || ||||| || ||||||||| ||| Sbjct 1632 TTACCCGTAAGGGTCTTGACGAAAATTTGCATTGTGA 1668 >seq5483 Length=1742 Score = 86.0 bits (94), Expect = 5e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 38729 GGCGGCGTGGGGCTGAACCTGACCGGCGGCAACCACATCATCATGCTGGAGCCGCACTGG 38788 || ||||| |||||||||||| ||| | | |||| | | | ||||| ||||||||| Sbjct 201 GGTGGCGTCGGGCTGAACCTGTGCGGTGCGAGCCACTTGCTGCTTCTGGACCCGCACTGG 142 Query 38789 AACCCGCAAATTGAGCTGCAGGCGCAAGACCGCATCCACCGCATGGGCCAGA 38840 |||||||| | ||| |||||| || |||||||| ||||| |||| |||| Sbjct 141 AACCCGCAGCTGGAGGAGCAGGCCCAGGACCGCATATACCGCGTGGGGCAGA 90 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420856127422808