Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25]
272,638 sequences; 241,555,716 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq51813 208 6e-49
seq89394 125 6e-24
seq49094 98.7 8e-16
seq38040 95.1 1e-14
seq98588 89.7 4e-13
seq22409 89.7 4e-13
seq5483 86.0 5e-12
>seq51813
Length=3444
Score = 208 bits (230), Expect = 6e-49
Identities = 488/725 (67%), Gaps = 15/725 (2%)
Strand=Plus/Plus
Query 102323 TTGGACCACGCGCCCTTAAAATCGTAACTCATGAGGAATATTTTATCAAGGAACCTTTGA 102382
|| ||||| || ||||| || || || ||||| | ||| || | ||| | | |||||
Sbjct 621 TTTGACCAGGCTCCCTTGAAGTCATAGCTCATCAAGAAAATATGATCCATATAATTTTGA 680
Query 102383 GCCGCGTCGTACTTCACCACGGCAATTTTGTCGTAGCCCGAACTAATCGCGCTCGTCAGC 102442
||| | |||| | || || ||||| || | || || ||||| || ||||
Sbjct 681 GCCTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGAGCTAATAGCAGAAGTCAAT 740
Query 102443 TCGTACGTCTTGTTCGTTTGCAGCTGC-AGTTCGTCCAGCATGGCGCGCAACTCTTTCAG 102501
||||| ||||| | || ||||| || || || ||||| | || || |||||||
Sbjct 741 TCGTATTTCTTGC-CATTCTTAGCTGAGAGCTCATCGAGCATCTCACGTAATTCTTTCAT 799
Query 102502 CAAAACAAGGTACGTGTCGGCGTCGCGCTCGCCGTTGCCGAGCGCCGGGTTGGCGCCCTT 102561
|||| | || || | || || | | | ||||| | ||||| || || ||
Sbjct 800 CAAACTTACATAGCAATCACCATCTT-CTGGGC--TACCGAGGTCAGGGTTAGCACCTTT 856
Query 102562 GCCGCCCGGAAACTCCCAATCGATGTCCACCCCGTCGAAAAACTTCCACACCTGCAAAAA 102621
||| || ||||||||||||||||| || || || ||||| || ||||| | | |||
Sbjct 857 GCCACCAGGAAACTCCCAATCGATATCTACACCATCGAAGAATTTCCATGTTAGAAGAAA 916
Query 102622 CTCTTTAACGGATTCGACAAACACGCGC-CGCTTGTCCGCGTCGTGCATGAAATAGAAC- 102679
||| || || || | ||||| || | | ||| | | | | ||| ||||
Sbjct 917 CTCCTTTACTGACTGCACAAAT-CGTGTTCTCTTA---GATTTATCAACTAAAAAGAAAA 972
Query 102680 --GGGTCGGACAGCGTCCAGCCGCCAATGGACGGCAGGATTTTCAAATGCGGGTTTGCCA 102737
|| |||| |||||||| || ||||| || || || || ||||| | |||| ||
Sbjct 973 AAGGATCGGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTCAATTCCGGGCGGGCTT 1032
Query 102738 GCTTGGCCGCCATCAACTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGCGGATACGC 102797
| || | ||| || ||||| |||||||||||||||||||||||||||| || | |
Sbjct 1033 GTTTTAGTGACATTAATTGGCCGAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAATC 1092
Query 102798 CCTTTTGCGGCTTTTGTATGGCGGCCCACGGGTCGTGGATAGCGACCTTAAAGTCTGCGC 102857
| ||||| || ||||||| || ||||| || |||||||| | ||| |||||||| | |
Sbjct 1093 CTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTAAAGTCCTCAC 1152
Query 102858 GGCCTTTGCACGAGCGCTGCAGCGCTTCAAAACTGCC-GGGAATGGTCTTGAGCGCGTCG 102916
|||| | || || || ||||| |||| |||||||| || | || ||| |||
Sbjct 1153 GGCCGCTACAGGACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAGC-TGTCA 1211
Query 102917 TTTAGCCCGTCGCCGCCGCAAATCGGGATGAAGCCGTACAGCAGATGGGACAGGTTGGGC 102976
|||| ||||| ||||||||||| || || ||||| || |||| ||| | || || ||
Sbjct 1212 TTTATGCCGTCACCGCCGCAAATGGGAATAAAGCCATAGAGCAAATGAGTAAGATTAGGT 1271
Query 102977 AGCGGCACTTTGTCCACCGGAAAGCCGCGGCCGTACACGCCCCACTCTACGAAATACGCG 103036
| || | ||||| || || | || || ||||| |||||||| || |||
Sbjct 1272 ATAGGTATACGATCCACGGGGAACTTTCTAGGATAGACACCCCATTCTACGAAGTAGGCG 1331
Query 103037 GCCAC 103041
||||
Sbjct 1332 CCCAC 1336
>seq89394
Length=1369
Score = 125 bits (138), Expect = 6e-24
Identities = 107/132 (81%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 29354 CGCACAAACGGACACTGCGGCGCCCACCGCTTGTGGTCCGTTTCCGGGTCGTCGCCCCTT 29413
|||| || ||||| || ||||||||||| | ||||||| | | || ||||||||| |
Sbjct 527 CGCAGGAAGGGACATTGGGGCGCCCACCGTTGGTGGTCCTTGGCGGGATCGTCGCCCGCT 468
Query 29414 ACCCAATTCGTAATCTCTACCTTGCAAAACGCGCAGCGCACCTCGTCGCCGCGGCCCAAG 29473
||||| ||| |||| ||||| || |||||||||||||| || || ||||||||||||| |
Sbjct 467 ACCCATTTCATAATTTCTACTTTACAAAACGCGCAGCGTACTTCATCGCCGCGGCCCAGG 408
Query 29474 TAGTAGAACCCG 29485
|| ||||| |||
Sbjct 407 TAATAGAAGCCG 396
>seq49094
Length=1117
Score = 98.7 bits (108), Expect = 8e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||||| |||||||| || ||||| ||||| |||||||| | ||| || | | ||
Sbjct 212 AGCACCAAGTGCAAAGTCGATTCCTTCTGAATATTATAGTCTGACAGTGTGCGTCCATCT 153
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
||||| || || || || |||| | ||| || || || || | ||||||||||||
Sbjct 152 TCCAGTTGCTTTCCGGCGAAAATTAATCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCT 93
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
|||||| || || | ||| |||||| | ||| ||||| || || ||
Sbjct 92 TGAATCTTTGCCTTTACGTTCTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATAGTT 33
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||||||| | ||||| ||||| ||||||||
Sbjct 32 TTGCCGGTCAGTGTTTTAACAAAAATTTGCAT 1
>seq38040
Length=2861
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||||||| | ||| |||| || | |||||||| || ||||| || || || | |
Sbjct 1781 CCTCCTCGCAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGAATATTGTAATCAGAC 1840
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| || | | || |||| || || || ||| | || || | ||| ||||| |||
Sbjct 1841 AAAGTGCGACCATCTTCCAATTGCTTACCAGCAAATATGAGACGCTGTTGGTCTGGGGGG 1900
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||| || || || ||||| | ||| || ||| || || |
Sbjct 1901 ATGCCTTCCTTATCCTGTATTTTAGCCTTCACATTCTCGATTGTGTCAGATGGTTCTACT 1960
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| |||||||||||| || || || ||||| ||||||||||||||
Sbjct 1961 TCCAGGGTAATGGTCTTTCCTGTCAATGTTTTCACAAATATTTGCAT 2007
>seq98588
Length=355
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 20967 ACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCC 21026
|||| || | ||| || || ||||||||||| ||||| | || || | | || |||
Sbjct 322 ACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGAGTGCGACCATCTTCC 263
Query 21027 AGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCG 21086
| || || || ||| | ||||| | |||||| || || | ||| || ||||| |
Sbjct 262 AATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTCTTGG 203
Query 21087 ATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTG 21146
|| || ||| || | | | ||||||| ||| ||| ||||| |||||||||||
Sbjct 202 ATTTTAGCTTTTACGTTTTCAATAGTATCAGAGGGTTCCACTTCCAGAGTAATGGTCTTT 143
Query 21147 CCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| |||| ||||| ||||| || |||||
Sbjct 142 CCAGTTAGGGTTTTAACAAAAATCTGCAT 114
>seq22409
Length=1756
Score = 89.7 bits (98), Expect = 4e-13
Identities = 150/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
||||| | |||||| ||||| |||||||||||||| ||||| | || || | | ||
Sbjct 1452 AGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCT 1511
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|| |||||||| || ||| | || | | |||||||| || | |||||||| ||
Sbjct 1512 TCTAGCTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCT 1571
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
|| || ||| || | | | ||||||| || ||| || | |||||||||
Sbjct 1572 TGAATTTTCGCTTTTACATTTTCTATAGTATCAGAGGCTTCCACCTCGAGGGTAATGGTT 1631
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGA 21180
|| || || | || ||||| || ||||||||| |||
Sbjct 1632 TTACCCGTAAGGGTCTTGACGAAAATTTGCATTGTGA 1668
>seq5483
Length=1742
Score = 86.0 bits (94), Expect = 5e-12
Identities = 86/112 (77%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 38729 GGCGGCGTGGGGCTGAACCTGACCGGCGGCAACCACATCATCATGCTGGAGCCGCACTGG 38788
|| ||||| |||||||||||| ||| | | |||| | | | ||||| |||||||||
Sbjct 201 GGTGGCGTCGGGCTGAACCTGTGCGGTGCGAGCCACTTGCTGCTTCTGGACCCGCACTGG 142
Query 38789 AACCCGCAAATTGAGCTGCAGGCGCAAGACCGCATCCACCGCATGGGCCAGA 38840
|||||||| | ||| |||||| || |||||||| ||||| |||| ||||
Sbjct 141 AACCCGCAGCTGGAGGAGCAGGCCCAGGACCGCATATACCGCGTGGGGCAGA 90
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420856127422808
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |