Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq51813 199 3e-46 seq38040 111 1e-19 seq49094 100 2e-16 seq60889 89.7 4e-13 seq98588 84.2 2e-11 seq22409 84.2 2e-11 >seq51813 Length=3444 Score = 199 bits (220), Expect = 3e-46 Identities = 438/649 (67%), Gaps = 33/649 (5%) Strand=Plus/Plus Query 97764 GGGTTAGCCCCTTTGCCGCCCGGAAATTCCCAATCGACGTCGACACCATCAAAAAATTTC 97823 |||||||| |||||||| || ||||| |||||||||| || |||||||| || |||||| Sbjct 843 GGGTTAGCACCTTTGCCACCAGGAAACTCCCAATCGATATCTACACCATCGAAGAATTTC 902 Query 97824 CACACTTGCAAAAATTCCTTAACCGACTCTACAAAAACGT-TTCTTTT---TTCAACGTC 97879 || | | | ||| ||||| || |||| ||||| ||| |||| || || | | | Sbjct 903 CATGTTAGAAGAAACTCCTTTACTGACTGCACAAAT-CGTGTTCTCTTAGATTTATCAAC 961 Query 97880 GTGCATGAAATAGAACGGGTCCGACAGAGTCCAGCCTCCTATTGAAGGAAGAATTTTTAG 97939 | |||| || || || | || ||||| || || || || |||||||| || | Sbjct 962 TAAAAAGAAA---AAAGGATCGGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTCAA 1018 Query 97940 ATGTGGGTTTGCTAATTTCGCCGCCATCAATTGTCCAAAATTGCCTTTGTACGGTTCGTT 97999 | ||| ||| ||| | ||| ||||| || || ||||||||||| || ||||| Sbjct 1019 TTCCGGGCGGGCTTGTTTTAGTGACATTAATTGGCCGAAGTTGCCTTTGTAGGGCTCGTT 1078 Query 98000 CCAAGCGGACACGCCCTTTTGGGGTTTTTGTACGGCGGCCCACGGATCGTGGATGGCAAC 98059 ||| | |||| || ||||| |||||||||| || ||||| ||||||||||| | || Sbjct 1079 CCATGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGAC 1138 Query 98060 TTTGAAATCTTCGCGTCCCCTGCACGATCGTTGCAGAGCTTCAAAACTTCCGGGTATTGT 98119 ||| || || || || || || || || |||||||| |||| ||||| || || Sbjct 1139 TTTAAAGTCCTCACGGCCGCTACAGGACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTC 1198 Query 98120 TTTGAGGGCGTCGTTTATTCCATCGCCACCGCAGATGGGTATGAAACCGTACAACAAGTG 98179 ||| | | ||| ||||| || || || ||||| ||||| || || || || | ||| || Sbjct 1199 TTTTAAGCTGTCATTTATGCCGTCACCGCCGCAAATGGGAATAAAGCCATAGAGCAAATG 1258 Query 98180 CGATAAATTTGGCAAGGGAACTTTGTCTACGGGAAAGCTGCGCCCGTACACACCCCACTC 98239 | | ||| || | || | || ||||| || | | || |||||||| || Sbjct 1259 AGTAAGATTAGGTATAGGTATACGATCCACGGGGAACTTTCTAGGATAGACACCCCATTC 1318 Query 98240 GACAAAGTACGCAGCGACAATTTTATCC---TCTCTTC-TGCCGGGTTTGTTGTTTTCCA 98295 || ||||| || | |||| ||| ||| | | | | || || || || ||||| Sbjct 1319 TACGAAGTAGGCGCCCACAACTTT-TCCAGATGTTTGCTTGAATGGCTTATTTTTTTCTC 1377 Query 98296 GCCATGTGTATTCGAGCGGCGCCAGATGACCGCCGTCGGTGTCTGCGATTTTGACCAACA 98355 | ||| ||||| || || | || ||||| || || || || || | ||||| Sbjct 1378 CCAGTGTATATTCCAGAGGAGGCAAATGACTTCCATCAGTATCGGCCA-------CAACA 1430 Query 98356 -------CGGGATCGCTTATGGAA---CAGCCGTCCTCATTGCAAAGTT 98394 |||||||||| ||| |||||||| | ||||||||||| Sbjct 1431 ATTTCGGTGGGATCGCTT---GAACTGCAGCCGTCTTGATTGCAAAGTT 1476 >seq38040 Length=2861 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||||||||| |||| ||| | || || || ||||| || || ||| || | Sbjct 2463 ATGCAAATATTTGTCAAGACACTAACAGGAAAGACCATAACTCTAGAGGTGGAGCCATCT 2404 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || | ||| ||||| || ||||||||| | || ||||||| Sbjct 2403 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGTATCCCTCCAGATCAA 2344 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCGATTACA 25212 ||| | ||||||||||| || || |||||||||||| || | |||| | || |||| Sbjct 2343 CAACGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTAT--CTGACTACA 2286 Query 25213 ATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||||||||| |||||||| |||||| | || | || || |||||||| Sbjct 2285 ATATTCAAAAAGAATCTACCCTTCACCTAGTACTGCGTTTGCGAGGAGG 2237 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||||||||| | ||||||||||| || || ||||||||| ||| ||||| | Sbjct 2007 ATGCAAATATTTGTGAAAACATTGACAGGAAAGACCATTACCCTGGAAGTAGAACCATCT 1948 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || | ||| ||||| ||||| ||||| | ||| ||| ||| Sbjct 1947 GACACAATCGAGAATGTGAAGGCTAAAATACAGGATAAGGAAGGCATCCCCCCAGACCAA 1888 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || | || || ||||| || || |||||||||||| ||| || | ||||||||| Sbjct 1887 CAGCGTCTCATATTTGCTGGTAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAAT 1828 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||||| || || || || |||||| |||| | || | |||||||| Sbjct 1827 ATTCAGAAAGAGTCCACCCTTCACTTGGTACTCCGTCTGCGAGGAGG 1781 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || | |||||| | || || ||||| ||||| ||| ||| | | Sbjct 2691 ATGCAAATTTTTGTTAAAACACTTACAGGAAAAACAATTACGTTAGAAGTTGAAGCTTCT 2632 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || | ||| |||||| || |||||||| | || ||||||| Sbjct 2631 GACACAATTGAAAATGTTAAGGCTAAAATTCAAGACAAAGAAGGCATTCCTCCAGATCAA 2572 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | | || ||||| || || ||||||||||| | || | |||| ||||| Sbjct 2571 CAACGTTTGATTTTTGCTGGAAAGCAATTGGAAGACGGCCGCACCCTTTCCGACTACAAC 2512 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||||||| ||||| || || ||| ||||| | || || |||||||| Sbjct 2511 ATTCAAAAAGAATCCACCCTCCACCTGGTGCTGCGTTTGCGAGGAGG 2465 Score = 89.7 bits (98), Expect = 4e-13 Identities = 88/112 (79%), Gaps = 4/112 (4%) Strand=Plus/Minus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 || ||||||||| | ||| ||| ||||| || || || ||||| || |||||| ||||| Sbjct 2826 GACAAAGAAGGTATTCCCCCAGACCAACAGAGGCTCATTTTTGCTGGAAAACAACTGGAA 2767 Query 25188 GATTCCA--AAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCA 25237 ||| | | ||||| | ||||| ||||||||||||||||||||||| || Sbjct 2766 GATGGCCGTACACTAT--CTGATTATAATATTCAAAAGGAATCTACTCTACA 2717 >seq49094 Length=1117 Score = 100 bits (110), Expect = 2e-16 Identities = 154/218 (71%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 ||||||||| || | || ||| |||| ||||| || || || ||| |||| | | Sbjct 228 AATGCAAATTTTTGTAAAGACACTGACAGGCAAGACTATCACACTGGAAGTGGAAGCTTC 287 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 || || | | || | ||| ||||||| |||||||| || | ||| |||||| Sbjct 288 TGATACAATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAGGGCATTCCCCCAGATCA 347 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCGATTAC 25211 |||||||||||| ||||| || || || | |||||| | | ||||| | || ||| Sbjct 348 ACAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTAT--CTGACTAC 405 Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 |||||||| |||||||||||| | ||| | || |||| Sbjct 406 AATATTCAGAAGGAATCTACTTTGCACTTAGTACTACG 443 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || | |||||| |||| |||||||| || || ||| |||| | | Sbjct 1 ATGCAAATTTTTGTTAAAACACTGACCGGCAAAACTATCACATTGGAAGTGGAAGCTTCT 60 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | | ||| ||| ||| || || ||||| | || ||||||| Sbjct 61 GATACAATCGAGAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAA 120 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 |||||| | || || || || || ||| |||||||| || || | || || ||| Sbjct 121 CAAAGATTAATTTTCGCCGGAAAGCAACTGGAAGATGGACGCACACTGTCAGACTATAAT 180 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 ||||| |||||||| ||| | ||| ||||| |||| Sbjct 181 ATTCAGAAGGAATCGACTTTGCACTTGGTGCTACG 215 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 ||||||||| || | || ||| |||| ||||| || || || ||| |||| | | Sbjct 684 AATGCAAATTTTTGTAAAGACACTGACAGGCAAGACTATCACACTGGAAGTGGAAGCTTC 743 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 || || | | || | ||| ||||||| |||||||| || | ||| |||||| Sbjct 744 TGATACAATTGAAAATGTTAAGGCAAAAATTCAGGATAAAGAGGGCATTCCCCCAGATCA 803 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213 |||||||| || ||||| || || || | |||||| || || | || ||||| Sbjct 804 GCAAAGACTAATTTTTGCTGGAAAGCAGCTCGAAGATGGACGTACACTGTCAGACTACAA 863 Query 25214 TATTCAAAAGGAATCTAC 25231 |||||| ||||||||||| Sbjct 864 TATTCAGAAGGAATCTAC 881 >seq60889 Length=898 Score = 89.7 bits (98), Expect = 4e-13 Identities = 88/112 (79%), Gaps = 4/112 (4%) Strand=Plus/Plus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 || ||||||||| | ||| ||| ||||| || || || ||||| || |||||| ||||| Sbjct 638 GACAAAGAAGGTATTCCCCCAGACCAACAGAGGCTCATTTTTGCTGGAAAACAACTGGAA 697 Query 25188 GATTCCA--AAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCA 25237 ||| | | ||||| | ||||| ||||||||||||||||||||||| || Sbjct 698 GATGGCCGTACACTAT--CTGATTATAATATTCAAAAGGAATCTACTCTACA 747 >seq98588 Length=355 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 25149 GATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGAT 25208 ||||| || | ||||||||||| || || |||||||||||| ||| | |||| Sbjct 228 GATCAGCAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCCGAC 287 Query 25209 TACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 ||||| |||||||| ||||||||||||||| |||| || || Sbjct 288 TACAACATTCAAAAAGAATCTACTCTTCACTTGGTATTGCG 328 >seq22409 Length=1756 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 25026 AGTGTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACG 25085 ||| | | ||||||||| ||| |||| || | ||||| |||||||||||| ||| | Sbjct 1672 AGTCTCACAATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTG 1613 Query 25086 GAACCCGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCC 25145 ||| || | || || | | || | || |||||| ||||| |||||| | || Sbjct 1612 GAAGCCTCTGATACTATAGAAAATGTAAAAGCGAAAATTCAAGATAAGGAAGGTATTCCA 1553 Query 25146 GTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCC 25205 ||| || ||| | | |||||||| || ||||| | |||||| || || | Sbjct 1552 CCAGACCAGCAACGTTTGATCTTTGCTGGTAAACAGCTAGAAGATGGACGTACATTGTCT 1493 Query 25206 GATTACAATATTCAAAAGGAATCTAC 25231 || ||||| |||||||||||||| || Sbjct 1492 GACTACAACATTCAAAAGGAATCCAC 1467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409431814406132