Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq49094 185 1e-41 seq38040 167 4e-36 seq22409 131 3e-25 seq60889 125 1e-23 seq98588 122 1e-22 >seq49094 Length=1117 Score = 185 bits (204), Expect = 1e-41 Identities = 169/211 (80%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| |||||||||| || |||||||| || || | || | ||||| Sbjct 456 AATGCAAATTTTTGTAAAGACACTGACTGGCAAAACGATTACATTGGAAGTGGAAGCTTC 515 Query 124598 TGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 ||||||||| ||| |||| || ||||||||||| ||||||||||| || || || | Sbjct 516 TGATACAATAGAAAATGTTAAGGCA-AAAATTCAAGACAAAGAAGGTATTCCTCCCGACC 574 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 |||| ||||||||||||||||||||||| |||| ||| |||| || | |||||||| Sbjct 575 AACAGAGGCTTATTTTTGCAGGAAAACAGCTAGAAGATGGTCGTACGCTGTCAGATTATA 634 Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGT 124747 ||||||| || |||||||||||||| ||||| Sbjct 635 ATATTCAGAAGGAATCAACTTTGCACTTGGT 665 Score = 165 bits (182), Expect = 1e-35 Identities = 182/240 (76%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| ||| |||||||||| |||||||| ||||| || | || | ||||| Sbjct 228 AATGCAAATTTTTGTAAAGACACTGACAGGCAAGACTATCACACTGGAAGTGGAAGCTTC 287 Query 124598 TGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 |||||||||| ||| |||| || |||||||| |||||||| || || || || |||| Sbjct 288 TGATACAATTGAAAATGTTAAGGCA-AAAATTCAGGATAAAGAGGGCATTCCCCCAGATC 346 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 ||||||| ||||||||||| ||||| || | || ||| | || ||| || || || | Sbjct 347 AACAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTATCTGACTACA 406 Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||||| || ||||| |||||||| || || |||| | ||||||| || ||| || Sbjct 407 ATATTCAGAAGGAATCTACTTTGCACTTAGTACTACGGCTGAGAGGTGGAATGCAAATTT 466 Score = 136 bits (150), Expect = 6e-27 Identities = 173/238 (73%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | || ||||| || ||||||||||| || | || | ||||| | Sbjct 1 ATGCAAATTTTTGTTAAAACACTGACCGGCAAAACTATCACATTGGAAGTGGAAGCTTCT 60 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 |||||||| || |||| || |||||||| || ||||| || || || |||||| Sbjct 61 GATACAATCGAGAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAA 120 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| | ||||| || ||||| ||| | || ||| | || ||| | ||| |||||| Sbjct 121 CAAAGATTAATTTTCGCCGGAAAGCAACTGGAAGATGGACGCACACTGTCAGACTATAAT 180 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||| || ||||| |||||||| ||||| |||| | | ||||| || ||| || Sbjct 181 ATTCAGAAGGAATCGACTTTGCACTTGGTGCTACGCCTTAGGGGTGGAATGCAAATTT 238 >seq38040 Length=2861 Score = 167 bits (184), Expect = 4e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||||||| | |||||||||||||| || || |||||| ||||| | || || | Sbjct 2463 ATGCAAATATTTGTCAAGACACTAACAGGAAAGACCATAACTCTAGAGGTGGAGCCATCT 2404 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || |||||| ||| |||| ||||| ||||| ||||||||||| || || |||||| Sbjct 2403 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGTATCCCTCCAGATCAA 2344 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | ||||| ||||| || || ||||| || ||| |||| || || || || ||| Sbjct 2343 CAACGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTATCTGACTACAAT 2284 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||||||||| || | || | || | ||||| ||||| ||||| Sbjct 2283 ATTCAAAAAGAATCTACCCTTCACCTAGTACTGCGTTTGCGAGGAGGTAT 2234 Score = 149 bits (164), Expect = 9e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||||||| | |||||||||||||| || ||||||||| ||||| | || || | Sbjct 2235 ATGCAAATATTTGTCAAGACACTAACAGGAAAGACTATAACTCTAGAGGTGGAGCCATCT 2176 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| || |||| || |||||||||||||| ||||| || || |||||| Sbjct 2175 GATACCATTGAAAACGTAAAGGCTAAGATTCAAGATAAAGAGGGTATTCCTCCAGATCAA 2116 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | || || ||||| || || || || || ||| | || || ||| || || || Sbjct 2115 CAACGTCTCATCTTTGCCGGCAAGCAGTTGGAAGATGGGCGTACCTTATCTGACTACAAC 2056 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| || || || | ||| | || ||||| | ||||||||||| Sbjct 2055 ATCCAAAAGGAGTCTACCCTTCATCTTGTACTACGTCTGCGAGGTGGTAT 2006 Score = 136 bits (150), Expect = 6e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | || ||||| ||||| ||||| || || |||| ||||||| | Sbjct 2691 ATGCAAATTTTTGTTAAAACACTTACAGGAAAAACAATTACGTTAGAAGTTGAAGCTTCT 2632 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || |||||| ||| | || ||||||||||| |||||||| || || || |||||| Sbjct 2631 GACACAATTGAAAATGTTAAGGCTAAAATTCAAGACAAAGAAGGCATTCCTCCAGATCAA 2572 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | |||||||| ||||| ||||| || || | || || | || || || Sbjct 2571 CAACGTTTGATTTTTGCTGGAAAGCAATTGGAAGACGGCCGCACCCTTTCCGACTACAAC 2512 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||||||||| || | || |||| | ||||| ||||| ||||| Sbjct 2511 ATTCAAAAAGAATCCACCCTCCACCTGGTGCTGCGTTTGCGAGGAGGTAT 2462 Score = 125 bits (138), Expect = 1e-23 Identities = 120/154 (78%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 || || ||||| ||||||||||| || || || ||||| ||||| |||||||| |||||| Sbjct 2835 AAGATCCAAGACAAAGAAGGTATTCCCCCAGACCAACAGAGGCTCATTTTTGCTGGAAAA 2776 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 ||| | || ||| | || ||| || ||||||||||||||||| ||||| ||| | ||| Sbjct 2775 CAACTGGAAGATGGCCGTACACTATCTGATTATAATATTCAAAAGGAATCTACTCTACAT 2716 Query 124743 TTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 || || || ||| | || || ||||| ||| || Sbjct 2715 TTAGTATTGCGTCTTCGCGGCGGTATGCAAATTT 2682 Score = 122 bits (134), Expect = 1e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| |||||||||| ||||| |||||||| || |||| | ||| | Sbjct 1779 ATGCAGATCTTTGTAAAGACACTCACAGGGAAAACTATCACATTAGAAGTGGAACCCTCA 1720 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | ||| || || ||||| ||||| ||||| || || |||||| Sbjct 1719 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 1660 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | || ||||| || || || || | |||||| | || || | || || || Sbjct 1659 CAACGTCTAATTTTCGCTGGTAAGCAGCTGGAGGATGGCCGCACTCTGTCGGACTACAAC 1600 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||||||||| ||||||||||| || | ||| | || ||||| || Sbjct 1599 ATCCAAAAAGAATCTACTTTGCATTTAGTACTTCGTCTTCGCGGTGGAAT 1550 Score = 109 bits (120), Expect = 8e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||||||| | || ||| | ||||| || || || || | || | ||| || | Sbjct 2007 ATGCAAATATTTGTGAAAACATTGACAGGAAAGACCATTACCCTGGAAGTAGAACCATCT 1948 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || ||||| ||| | || ||||| || ||||| ||||| || || || || ||| Sbjct 1947 GACACAATCGAGAATGTGAAGGCTAAAATACAGGATAAGGAAGGCATCCCCCCAGACCAA 1888 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | || || ||||| || || ||||| || ||| |||| || || ||||| ||| Sbjct 1887 CAGCGTCTCATATTTGCTGGTAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAAT 1828 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| ||||| || || | || ||||| | ||| | ||||| ||||| Sbjct 1827 ATTCAGAAAGAGTCCACCCTTCACTTGGTACTCCGTCTGCGAGGAGGTAT 1778 >seq22409 Length=1756 Score = 131 bits (144), Expect = 3e-25 Identities = 153/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 124536 ACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCA 124595 ||||||||||| || | ||||| || || || ||||| || || | ||| | ||||| Sbjct 1666 ACAATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAAGCC 1607 Query 124596 AATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655 |||||| || ||| ||||| ||||||||||||||| |||||||| ||||| || Sbjct 1606 TCTGATACTATAGAAAATGTAAAAGCGAAAATTCAAGATAAGGAAGGTATTCCACCAGAC 1547 Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715 || ||| | | || ||||| || ||||| |||| ||| | || ||||| || || Sbjct 1546 CAGCAACGTTTGATCTTTGCTGGTAAACAGCTAGAAGATGGACGTACATTGTCTGACTAC 1487 Query 124716 AATATTCAAAAAGAATCAACTTTGCAT 124742 || |||||||| ||||| || |||||| Sbjct 1486 AACATTCAAAAGGAATCCACATTGCAT 1460 >seq60889 Length=898 Score = 125 bits (138), Expect = 1e-23 Identities = 120/154 (78%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 || || ||||| ||||||||||| || || || ||||| ||||| |||||||| |||||| Sbjct 629 AAGATCCAAGACAAAGAAGGTATTCCCCCAGACCAACAGAGGCTCATTTTTGCTGGAAAA 688 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 ||| | || ||| | || ||| || ||||||||||||||||| ||||| ||| | ||| Sbjct 689 CAACTGGAAGATGGCCGTACACTATCTGATTATAATATTCAAAAGGAATCTACTCTACAT 748 Query 124743 TTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 || || || ||| | || || ||||| ||| || Sbjct 749 TTAGTATTGCGTCTTCGCGGCGGTATGCAAATTT 782 >seq98588 Length=355 Score = 122 bits (134), Expect = 1e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | || || ||||| || || || || ||| | || | ||| | | Sbjct 114 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTCT 173 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| || ||||| ||||| ||||| ||||| || || ||||||||||| Sbjct 174 GATACTATTGAAAACGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 233 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | ||||| ||||| || || ||||| || ||| |||| || | || || || Sbjct 234 CAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCCGACTACAAC 293 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||||||||| ||| | || ||||| || ||| | || ||||| || Sbjct 294 ATTCAAAAAGAATCTACTCTTCACTTGGTATTGCGTCTTCGTGGTGGAAT 343 Score = 95.1 bits (104), Expect = 2e-14 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 124654 ATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATT 124713 |||||||| | |||||||| || || || ||||| || ||| |||| ||| | || | Sbjct 1 ATCAACAACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGTACACTTTCTGACT 60 Query 124714 ATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 | || || ||||||||||| ||||||||||| || | |||||| |||||||||| Sbjct 61 ACAACATCCAAAAAGAATCTACTTTGCATTTAGTCCTTCGTTTAAGAGGTGGTAT 115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 752881424838400