Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25]
272,638 sequences; 241,555,716 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq20239 127 3e-24
seq60889 107 3e-18
seq49094 107 3e-18
seq38040 107 3e-18
seq98588 89.7 8e-13
>seq20239
Length=1312
Score = 127 bits (140), Expect = 3e-24
Identities = 153/208 (74%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 10499 AGCTGGAGTAATTGACGAAGATTATAGAGGAAATGTGGGAGTAATATTATTTAATCATTC 10558
|||||| || || || |||||||| | ||||| | ||||| | ||||| ||||||||
Sbjct 1278 AGCTGGTGTCATAGATGAAGATTACCGTGGAAACATTGGAGTGGTCTTATTCAATCATTC 1219
Query 10559 TAATGAAGATTTTATAATAAATAGAGGAGATAGAATATCTCAATTAATATGTGAAAAAAT 10618
|| |||||||||| | | | | ||| |||||||| ||||| | |||||||||| |||
Sbjct 1218 TAGTGAAGATTTTGCAGTTAGAAAAGGTGATAGAATTGCTCAACTGATATGTGAAAGAAT 1159
Query 10619 TTTATATCCTAAAATGTTAAAAGTCGATAGTTTATCAGAAACAAAAAGATCTGATTTTGG 10678
||| ||||| | | | |||| || | | | ||||||||||||||| || |||
Sbjct 1158 TTTCTATCCGGATCTAGTTGAAGTTGACAATCTCTCAGAAACAAAAAGAGGAGAAGGTGG 1099
Query 10679 TTTTGGATCTACTGGTTATAATTAAGAA 10706
|||||| ||||| || | | ||||||
Sbjct 1098 TTTTGGGTCTACAGGAACTCAATAAGAA 1071
>seq60889
Length=898
Score = 107 bits (118), Expect = 3e-18
Identities = 99/123 (80%), Gaps = 2/123 (2%)
Strand=Plus/Minus
Query 146066 AATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGAAAGAGTTCTGCTATC 146124
||||| ||||||| ||||||||| ||| || ||||||||||| || || || | || |||
Sbjct 756 AATACTAAATGTAGAGTAGATTCCTTTTGA-ATATTATAATCAGATAGTGTACGGCCATC 698
Query 146125 ATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATC 146184
|| | |||||||||||||||||| | || || || || || ||||| |||||||| ||
Sbjct 697 TTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGGAATACCTTCTTTGTC 638
Query 146185 TTG 146187
|||
Sbjct 637 TTG 635
>seq49094
Length=1117
Score = 107 bits (118), Expect = 3e-18
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
|||||||||| || | | ||| ||||| || |||||||| || ||||| || ||||
Sbjct 913 TTCCACCTCTCAGACGCAGTACTAAATGCAAGGTAGATTCCTTCTGAATATTGTAGTCTG 854
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
| || || | | ||| || | || |||||||||||||| | |||||||||||| || |
Sbjct 853 ACAGTGTACGTCCATCTTCGAGCTGCTTTCCAGCAAAAATTAGTCTTTGCTGATCTGGGG 794
Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228
|||| || |||||||| || ||||| ||| ||| |
Sbjct 793 GAATGCCCTCTTTATCCTGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCCA 734
Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278
|||| |||||||| || || ||||| | ||| || | || |||||||||
Sbjct 733 CTTCCAGTGTGATAGTCTTGCCTGTCAGTGTCTTTACAAAAATTTGCATT 684
Score = 104 bits (114), Expect = 3e-17
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
|||||||||| || | || ||| || || ||||||||||| || ||||| || || |
Sbjct 457 TTCCACCTCTCAGCCGTAGTACTAAGTGCAAAGTAGATTCCTTCTGAATATTGTAGTCAG 398
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
| || || | | ||| || | || |||||||||||||| | |||||| ||||| || |
Sbjct 397 ATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGTTGATCTGGGG 338
Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228
|||| || |||||||| || ||||| ||| ||| |
Sbjct 337 GAATGCCCTCTTTATCCTGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCCA 278
Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278
|||| |||||||| || || ||||| | ||| || | || |||||||||
Sbjct 277 CTTCCAGTGTGATAGTCTTGCCTGTCAGTGTCTTTACAAAAATTTGCATT 228
Score = 98.7 bits (108), Expect = 1e-15
Identities = 105/139 (76%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
|||| || ||||| | | ||||| || ||||| ||||| || |||||||||||||
Sbjct 685 TTCCCCCCCTAAGGCGCAGCACCAAGTGCAAAGTTGATTCCTTCTGAATATTATAATCTG 626
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
| || || | | ||| |||| |||||||| |||||||| | || || || || ||||
Sbjct 625 ACAGCGTACGACCATCTTCTAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCGGGAG 566
Query 146169 GAATTCCTTCTTTATCTTG 146187
|||| |||||||| |||||
Sbjct 565 GAATACCTTCTTTGTCTTG 547
Score = 91.5 bits (100), Expect = 2e-13
Identities = 139/206 (67%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 146073 AATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCTAATT 146132
|||| ||||||||||| || || ||||| || || || || | | ||| || | ||
Sbjct 1117 AATGCAAAGTAGATTCCTTCTGGATGTTATAGTCAGACAGTGTGCGCCCATCTTCCAGTT 1058
Query 146133 GTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTGNNNNN 146192
| |||||||| |||||||||||||| || || ||||| || ||||| || |||||
Sbjct 1057 GCTTTCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATGCCTTCCTTGTCTTGAATCT 998
Query 146193 NNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACTTCTAGTGTGATTGTTTTACCTG 146252
|| || ||| ||| || |||| || || |||||||| |
Sbjct 997 TTGCCTTAACATTTTCGATTGTGTCAGAAGCTTCCACCTCTAAAGTAATAGTTTTACCAG 938
Query 146253 TTAATGTTTTAATGAATATTTGCATT 146278
| | |||||||| ||| |||||||||
Sbjct 937 TCAGTGTTTTAACGAAAATTTGCATT 912
>seq38040
Length=2861
Score = 107 bits (118), Expect = 3e-18
Identities = 99/123 (80%), Gaps = 2/123 (2%)
Strand=Plus/Plus
Query 146066 AATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGAAAGAGTTCTGCTATC 146124
||||| ||||||| ||||||||| ||| || ||||||||||| || || || | || |||
Sbjct 2708 AATACTAAATGTAGAGTAGATTCCTTTTGA-ATATTATAATCAGATAGTGTACGGCCATC 2766
Query 146125 ATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATC 146184
|| | |||||||||||||||||| | || || || || || ||||| |||||||| ||
Sbjct 2767 TTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGGAATACCTTCTTTGTC 2826
Query 146185 TTG 146187
|||
Sbjct 2827 TTG 2829
Score = 98.7 bits (108), Expect = 1e-15
Identities = 135/197 (69%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 146081 GTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCA 146140
|| |||||||| || || || || ||||| || | || || || ||||| ||||||
Sbjct 2495 GTGGATTCTTTTTGAATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTCCAATTGCTTTCCA 2554
Query 146141 GCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTGNNNNNNNNNNNNN 146200
||||||||||| | ||| ||||| |||||||| |||||||| |||||
Sbjct 2555 GCAAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGAATTTTAGCCTTA 2614
Query 146201 NNNNNNNNNNNAGTATCTGAACTTTCTACTTCTAGTGTGATTGTTTTACCTGTTAATGTT 146260
|| || ||| ||| ||||||| || |||||||| ||||| | ||||
Sbjct 2615 ACATTTTCAATTGTGTCAGAAGCTTCAACTTCTAACGTAATTGTTTTTCCTGTAAGTGTT 2674
Query 146261 TTAATGAATATTTGCAT 146277
|||| || ||||||||
Sbjct 2675 TTAACAAAAATTTGCAT 2691
Score = 87.8 bits (96), Expect = 3e-12
Identities = 152/229 (66%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
||||||| | ||| | | ||| ||||| |||||||||||||| || || || || |
Sbjct 1551 TTCCACCGCGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCCG 1610
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
| ||||| | || ||| || | || || ||||| ||||| | | ||| ||||| || |
Sbjct 1611 ACAGAGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAAATTAGACGTTGTTGATCTGGGG 1670
Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228
|||| || ||||| ||||| ||| ||||| ||| |
Sbjct 1671 GAATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCCA 1730
Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277
|||||| |||||| ||||| ||||| | ||| || | || || |||||
Sbjct 1731 CTTCTAATGTGATAGTTTTCCCTGTGAGTGTCTTTACAAAGATCTGCAT 1779
>seq98588
Length=355
Score = 89.7 bits (98), Expect = 8e-13
Identities = 103/139 (74%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
||||||| | ||| | |||||||| || | |||||||||||| || || || || |
Sbjct 342 TTCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGG 283
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
||||||| | | ||| || ||||| || |||||||| || | | |||||||| || |
Sbjct 282 AAAGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTG 223
Query 146169 GAATTCCTTCTTTATCTTG 146187
| || || ||||| |||||
Sbjct 222 GGATGCCCTCTTTGTCTTG 204
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740992480616960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |