Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq20239 127 3e-24 seq60889 107 3e-18 seq49094 107 3e-18 seq38040 107 3e-18 seq98588 89.7 8e-13 >seq20239 Length=1312 Score = 127 bits (140), Expect = 3e-24 Identities = 153/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 10499 AGCTGGAGTAATTGACGAAGATTATAGAGGAAATGTGGGAGTAATATTATTTAATCATTC 10558 |||||| || || || |||||||| | ||||| | ||||| | ||||| |||||||| Sbjct 1278 AGCTGGTGTCATAGATGAAGATTACCGTGGAAACATTGGAGTGGTCTTATTCAATCATTC 1219 Query 10559 TAATGAAGATTTTATAATAAATAGAGGAGATAGAATATCTCAATTAATATGTGAAAAAAT 10618 || |||||||||| | | | | ||| |||||||| ||||| | |||||||||| ||| Sbjct 1218 TAGTGAAGATTTTGCAGTTAGAAAAGGTGATAGAATTGCTCAACTGATATGTGAAAGAAT 1159 Query 10619 TTTATATCCTAAAATGTTAAAAGTCGATAGTTTATCAGAAACAAAAAGATCTGATTTTGG 10678 ||| ||||| | | | |||| || | | | ||||||||||||||| || ||| Sbjct 1158 TTTCTATCCGGATCTAGTTGAAGTTGACAATCTCTCAGAAACAAAAAGAGGAGAAGGTGG 1099 Query 10679 TTTTGGATCTACTGGTTATAATTAAGAA 10706 |||||| ||||| || | | |||||| Sbjct 1098 TTTTGGGTCTACAGGAACTCAATAAGAA 1071 >seq60889 Length=898 Score = 107 bits (118), Expect = 3e-18 Identities = 99/123 (80%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 146066 AATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGAAAGAGTTCTGCTATC 146124 ||||| ||||||| ||||||||| ||| || ||||||||||| || || || | || ||| Sbjct 756 AATACTAAATGTAGAGTAGATTCCTTTTGA-ATATTATAATCAGATAGTGTACGGCCATC 698 Query 146125 ATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATC 146184 || | |||||||||||||||||| | || || || || || ||||| |||||||| || Sbjct 697 TTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGGAATACCTTCTTTGTC 638 Query 146185 TTG 146187 ||| Sbjct 637 TTG 635 >seq49094 Length=1117 Score = 107 bits (118), Expect = 3e-18 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||||||||| || | | ||| ||||| || |||||||| || ||||| || |||| Sbjct 913 TTCCACCTCTCAGACGCAGTACTAAATGCAAGGTAGATTCCTTCTGAATATTGTAGTCTG 854 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 | || || | | ||| || | || |||||||||||||| | |||||||||||| || | Sbjct 853 ACAGTGTACGTCCATCTTCGAGCTGCTTTCCAGCAAAAATTAGTCTTTGCTGATCTGGGG 794 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228 |||| || |||||||| || ||||| ||| ||| | Sbjct 793 GAATGCCCTCTTTATCCTGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCCA 734 Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278 |||| |||||||| || || ||||| | ||| || | || ||||||||| Sbjct 733 CTTCCAGTGTGATAGTCTTGCCTGTCAGTGTCTTTACAAAAATTTGCATT 684 Score = 104 bits (114), Expect = 3e-17 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||||||||| || | || ||| || || ||||||||||| || ||||| || || | Sbjct 457 TTCCACCTCTCAGCCGTAGTACTAAGTGCAAAGTAGATTCCTTCTGAATATTGTAGTCAG 398 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 | || || | | ||| || | || |||||||||||||| | |||||| ||||| || | Sbjct 397 ATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGTTGATCTGGGG 338 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228 |||| || |||||||| || ||||| ||| ||| | Sbjct 337 GAATGCCCTCTTTATCCTGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCCA 278 Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278 |||| |||||||| || || ||||| | ||| || | || ||||||||| Sbjct 277 CTTCCAGTGTGATAGTCTTGCCTGTCAGTGTCTTTACAAAAATTTGCATT 228 Score = 98.7 bits (108), Expect = 1e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| || ||||| | | ||||| || ||||| ||||| || ||||||||||||| Sbjct 685 TTCCCCCCCTAAGGCGCAGCACCAAGTGCAAAGTTGATTCCTTCTGAATATTATAATCTG 626 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 | || || | | ||| |||| |||||||| |||||||| | || || || || |||| Sbjct 625 ACAGCGTACGACCATCTTCTAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCGGGAG 566 Query 146169 GAATTCCTTCTTTATCTTG 146187 |||| |||||||| ||||| Sbjct 565 GAATACCTTCTTTGTCTTG 547 Score = 91.5 bits (100), Expect = 2e-13 Identities = 139/206 (67%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 146073 AATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCTAATT 146132 |||| ||||||||||| || || ||||| || || || || | | ||| || | || Sbjct 1117 AATGCAAAGTAGATTCCTTCTGGATGTTATAGTCAGACAGTGTGCGCCCATCTTCCAGTT 1058 Query 146133 GTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTGNNNNN 146192 | |||||||| |||||||||||||| || || ||||| || ||||| || ||||| Sbjct 1057 GCTTTCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATGCCTTCCTTGTCTTGAATCT 998 Query 146193 NNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACTTCTAGTGTGATTGTTTTACCTG 146252 || || ||| ||| || |||| || || |||||||| | Sbjct 997 TTGCCTTAACATTTTCGATTGTGTCAGAAGCTTCCACCTCTAAAGTAATAGTTTTACCAG 938 Query 146253 TTAATGTTTTAATGAATATTTGCATT 146278 | | |||||||| ||| ||||||||| Sbjct 937 TCAGTGTTTTAACGAAAATTTGCATT 912 >seq38040 Length=2861 Score = 107 bits (118), Expect = 3e-18 Identities = 99/123 (80%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 146066 AATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGAAAGAGTTCTGCTATC 146124 ||||| ||||||| ||||||||| ||| || ||||||||||| || || || | || ||| Sbjct 2708 AATACTAAATGTAGAGTAGATTCCTTTTGA-ATATTATAATCAGATAGTGTACGGCCATC 2766 Query 146125 ATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATC 146184 || | |||||||||||||||||| | || || || || || ||||| |||||||| || Sbjct 2767 TTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGGAATACCTTCTTTGTC 2826 Query 146185 TTG 146187 ||| Sbjct 2827 TTG 2829 Score = 98.7 bits (108), Expect = 1e-15 Identities = 135/197 (69%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 146081 GTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCA 146140 || |||||||| || || || || ||||| || | || || || ||||| |||||| Sbjct 2495 GTGGATTCTTTTTGAATGTTGTAGTCGGAAAGGGTGCGGCCGTCTTCCAATTGCTTTCCA 2554 Query 146141 GCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTGNNNNNNNNNNNNN 146200 ||||||||||| | ||| ||||| |||||||| |||||||| ||||| Sbjct 2555 GCAAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGAATTTTAGCCTTA 2614 Query 146201 NNNNNNNNNNNAGTATCTGAACTTTCTACTTCTAGTGTGATTGTTTTACCTGTTAATGTT 146260 || || ||| ||| ||||||| || |||||||| ||||| | |||| Sbjct 2615 ACATTTTCAATTGTGTCAGAAGCTTCAACTTCTAACGTAATTGTTTTTCCTGTAAGTGTT 2674 Query 146261 TTAATGAATATTTGCAT 146277 |||| || |||||||| Sbjct 2675 TTAACAAAAATTTGCAT 2691 Score = 87.8 bits (96), Expect = 3e-12 Identities = 152/229 (66%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 ||||||| | ||| | | ||| ||||| |||||||||||||| || || || || | Sbjct 1551 TTCCACCGCGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCCG 1610 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 | ||||| | || ||| || | || || ||||| ||||| | | ||| ||||| || | Sbjct 1611 ACAGAGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAAATTAGACGTTGTTGATCTGGGG 1670 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228 |||| || ||||| ||||| ||| ||||| ||| | Sbjct 1671 GAATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCCA 1730 Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 |||||| |||||| ||||| ||||| | ||| || | || || ||||| Sbjct 1731 CTTCTAATGTGATAGTTTTCCCTGTGAGTGTCTTTACAAAGATCTGCAT 1779 >seq98588 Length=355 Score = 89.7 bits (98), Expect = 8e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 ||||||| | ||| | |||||||| || | |||||||||||| || || || || | Sbjct 342 TTCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGG 283 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 ||||||| | | ||| || ||||| || |||||||| || | | |||||||| || | Sbjct 282 AAAGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTG 223 Query 146169 GAATTCCTTCTTTATCTTG 146187 | || || ||||| ||||| Sbjct 222 GGATGCCCTCTTTGTCTTG 204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740992480616960