Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25]
272,638 sequences; 241,555,716 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq38040 100 2e-16
seq98588 91.5 9e-14
seq80369 89.7 3e-13
seq49094 89.7 3e-13
>seq38040
Length=2861
Score = 100 bits (110), Expect = 2e-16
Identities = 163/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 34159 GAATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTC 34218
|| ||| ||||| || | || || | || |||||| |||||| || |||||||||||
Sbjct 1549 GATTCCACCGCGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTC 1608
Query 34219 GGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGAC 34278
||||| ||| | || |||| |||||| || |||||||| || || || || ||
Sbjct 1609 CGACAGAGTGCGGCCATCCTCCAGCTGCTTACCAGCGAAAATTAGACGTTGTTGATCTGG 1668
Query 34279 GGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATT 34337
||| | | ||| ||||| ||| || ||||| | || | || | || | | ||
Sbjct 1669 GGGAATACCCTCTTTGTCTTGGATC-TTGGCTTTAACATTTTCAATAGTGTCTGAGGGTT 1727
Query 34338 CGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
| || || | ||||| ||||| || ||||| || || ||||||||||||||
Sbjct 1728 CCACTTCTAATGTGATAGTTTTCCCTGTGAGTGTCTTTACAAAGATCTGCAT 1779
>seq98588
Length=355
Score = 91.5 bits (100), Expect = 9e-14
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
||| || || || | || |||| ||| | |||| |||||| || ||||||||||||||
Sbjct 341 TCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGA 282
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
|| || | || ||||| ||||| || || || || || |||||||| || ||
Sbjct 281 AAGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGG 222
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGC-TTTAGATCGGCTATCGAATCGGTCGATTCGA 34340
| || ||| ||||| || ||| || |||| | | || | ||| | | ||| |
Sbjct 221 GATGCCCTCTTTGTCTTGGAT-TTTAGCTTTTACGTTTTCAATAGTATCAGAGGGTTCCA 163
Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
| |||| || ||||| || || || || ||||| ||||| ||||||||
Sbjct 162 CTTCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 114
>seq80369
Length=3501
Score = 89.7 bits (98), Expect = 3e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || || || || | ||| || || | |||||||| ||||| || ||||| || ||
Sbjct 419 CCCCCACGTAGTCTTAACACAAGATGCAGTGTACTTTCCTTCTGGATATTGTAATCAGAT 360
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
||| | | || || | ||||| || || || || |||| |||||| || ||
Sbjct 359 AGCGTTCTAGCATCCTCGAGTTGCTTACCAGCAAAGATAAGCCTCTGCTGATCTGGTGGA 300
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| |||||||| |||| || | || | ||| | || || ||
Sbjct 299 ATGCCCTCCTTGTCTTCTATCTTTGCTTTTACATTCTCGATAGTATCACTAGACTCTACT 240
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| || || || || || || | ||||| ||||||||||||||
Sbjct 239 TCCAATGTTATTGTCTTTCCTGTTAATGTTTTAACAAAGATCTGCAT 193
>seq49094
Length=1117
Score = 89.7 bits (98), Expect = 3e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||| ||| ||||| ||| ||||| || || ||||| ||||| || | ||
Sbjct 212 AGCACCAAGTGCAAAGTCGATTCCTTCTGAATATTATAGTCTGACAGTGTGCGTCCATCT 153
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| ||||| || |||||||| | | || || || || | || ||||||||
Sbjct 152 TCCAGTTGCTTTCCGGCGAAAATTAATCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCT 93
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
|||||| ||||| | | || | ||| | | ||| || |||| ||||| |||
Sbjct 92 TGAATCTTTGCCTTTACGTTCTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATAGTT 33
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||||||| || ||||| ||||| || |||||
Sbjct 32 TTGCCGGTCAGTGTTTTAACAAAAATTTGCAT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 321998504233280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |