Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_002730.1 Length=38297 Score E Sequences producing significant alignments: (Bits) Value seq262377 122 2e-23 seq250077 87.8 4e-13 >seq262377 Length=537 Score = 122 bits (134), Expect = 2e-23 Identities = 358/539 (66%), Gaps = 12/539 (2%) Strand=Plus/Plus Query 27185 GCACAGCCATCGCTGATGGTGCAGAAAGGCATTGCCGGGACTTACTGCAAAACGCCGTT- 27243 || ||||| || |||||||| ||||| || || || || || | | || || | || | Sbjct 3 GCTCAGCCGTCACTGATGGTCCAGAAGGGGATCGCTGGAACGTTC-GCCAAGTGTCGCTA 61 Query 27244 TGCTGATTCGTATGCGTTCATCAGCAATCCGGC-AACAGGTGCGCCGTCTGTATATATCA 27302 ||| || || | || || | ||||| ||||| ||| ||| |||| ||||| ||| | | Sbjct 62 TGCAGACTCACACGCCTTTGTTAGCAACCCGGCCAACGGGT-CGCCTTCTGTTTATGTGA 120 Query 27303 TCGGCTCCGG-TCAGGTGTCACCAATCTCCAGCGCGAGCATTGAGAAAATCCTCCGCTCC 27361 | || || || | | ||| ||||||| | || | || || | || | Sbjct 121 TAAGCCAAGGCTCTGCTA-CACAAATCTCCTCGGTCAGTGTCGATAAGGTTCTGAGAAGT 179 Query 27362 TACACCGCTGATGAACTGGCTGATGGCGTGATGGAATCGTTGCGCTTTGATGCTCATGAG 27421 |||| ||| ||| ||||| | | ||||| || || || || |||| ||| ||| Sbjct 180 TACAGCGCCACTGATTTGGCTCAGGTGCACATGGAGTCCTTACGATTCGATGGTCACGAG 239 Query 27422 TTGCTGATTATCCACCTGCCGCGCCACGTCCTAGTATATGACGCATCTTCAAGCGCCAAT 27481 | | || |||||||| ||| | || || |||||||| || |||| || Sbjct 240 CTAATCATCATCCACCTACCGAATGATGTACTTTGCTATGACGCCTCAGCAAGTCAGAAC 299 Query 27482 GGTCCGCAATGGTGTGTGTTGAAAACTGGCTTGTATGACGATGTGTACCGCGCTATCGAC 27541 ||||||||||||| | |||||||||| | ||||| | | | || ||||||||| Sbjct 300 GGTCCGCAATGGTCAATCCTGAAAACTGGACTCTATGATACTCCGCATCGTGCTATCGAC 359 Query 27542 TTCATTTACGAAGGCAATCAGATAACGTGCGGCGATAAGCTGGAATCCGTGACCGGGAAA 27601 ||||| || || || || ||||| || ||||| || ||| | |||| ||||||||| | Sbjct 360 TTCATGTATGAGGGTAACCAGATTACCTGCGGAGACAAGACGCAATCTGTGACCGGGTAT 419 Query 27602 TTGCAGTTCGAT--ATCAGCAGCCAGTACGACAAGCAACAGGAACACCTGCTGTTTACTC 27659 | | | | | ||| || ||||||||| | || |||||||| || | || | Sbjct 420 CTTAATTATGCTCACTCATCA--CAGTACGACGCAGAGCAAGAACACCTTCTCTACACGC 477 Query 27660 CGTTGTTCAAAGCGGATAAC-GCCAGAGTTTTCGACCTTGAAGTTGAATCGTCAACTGG 27717 | | ||||| || |||||| || || | ||||| | ||| | ||| | ||||| || Sbjct 478 CACTTTTCAAGGCTGATAACAACCTGA-TATTCGATTTCGAATTAGAAGCATCAACAGG 535 >seq250077 Length=544 Score = 87.8 bits (96), Expect = 4e-13 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 28018 CAGTCGTATCTGCTTTACGTTATCGCACAGGGCACTGATGTTGGTAACGTGGCTAACAAG 28077 ||| | ||||| ||||| ||| || || || || || | ||||| || ||| || Sbjct 442 CAGCCTTATCTACTTTATGTTGTCCAGCAAGGTACCGACTTAGGTAATGTTGCTGGTAAA 383 Query 28078 GCCAACGAGGCTGGTCAGGGCGCTTACGATGCCCAGGTAAAAAACGATGAACAGGA 28133 ||||||||||| |||||||| ||||||||||||||||| || || || || ||||| Sbjct 382 GCCAACGAGGCAGGTCAGGGTGCTTACGATGCCCAGGTGAAGAATGACGAGCAGGA 327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122032427424804