Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25]
272,638 sequences; 241,555,716 total letters
Query= NC_002730.1
Length=38297
Score E
Sequences producing significant alignments: (Bits) Value
seq262377 122 2e-23
seq250077 87.8 4e-13
>seq262377
Length=537
Score = 122 bits (134), Expect = 2e-23
Identities = 358/539 (66%), Gaps = 12/539 (2%)
Strand=Plus/Plus
Query 27185 GCACAGCCATCGCTGATGGTGCAGAAAGGCATTGCCGGGACTTACTGCAAAACGCCGTT- 27243
|| ||||| || |||||||| ||||| || || || || || | | || || | || |
Sbjct 3 GCTCAGCCGTCACTGATGGTCCAGAAGGGGATCGCTGGAACGTTC-GCCAAGTGTCGCTA 61
Query 27244 TGCTGATTCGTATGCGTTCATCAGCAATCCGGC-AACAGGTGCGCCGTCTGTATATATCA 27302
||| || || | || || | ||||| ||||| ||| ||| |||| ||||| ||| | |
Sbjct 62 TGCAGACTCACACGCCTTTGTTAGCAACCCGGCCAACGGGT-CGCCTTCTGTTTATGTGA 120
Query 27303 TCGGCTCCGG-TCAGGTGTCACCAATCTCCAGCGCGAGCATTGAGAAAATCCTCCGCTCC 27361
| || || || | | ||| ||||||| | || | || || | || |
Sbjct 121 TAAGCCAAGGCTCTGCTA-CACAAATCTCCTCGGTCAGTGTCGATAAGGTTCTGAGAAGT 179
Query 27362 TACACCGCTGATGAACTGGCTGATGGCGTGATGGAATCGTTGCGCTTTGATGCTCATGAG 27421
|||| ||| ||| ||||| | | ||||| || || || || |||| ||| |||
Sbjct 180 TACAGCGCCACTGATTTGGCTCAGGTGCACATGGAGTCCTTACGATTCGATGGTCACGAG 239
Query 27422 TTGCTGATTATCCACCTGCCGCGCCACGTCCTAGTATATGACGCATCTTCAAGCGCCAAT 27481
| | || |||||||| ||| | || || |||||||| || |||| ||
Sbjct 240 CTAATCATCATCCACCTACCGAATGATGTACTTTGCTATGACGCCTCAGCAAGTCAGAAC 299
Query 27482 GGTCCGCAATGGTGTGTGTTGAAAACTGGCTTGTATGACGATGTGTACCGCGCTATCGAC 27541
||||||||||||| | |||||||||| | ||||| | | | || |||||||||
Sbjct 300 GGTCCGCAATGGTCAATCCTGAAAACTGGACTCTATGATACTCCGCATCGTGCTATCGAC 359
Query 27542 TTCATTTACGAAGGCAATCAGATAACGTGCGGCGATAAGCTGGAATCCGTGACCGGGAAA 27601
||||| || || || || ||||| || ||||| || ||| | |||| ||||||||| |
Sbjct 360 TTCATGTATGAGGGTAACCAGATTACCTGCGGAGACAAGACGCAATCTGTGACCGGGTAT 419
Query 27602 TTGCAGTTCGAT--ATCAGCAGCCAGTACGACAAGCAACAGGAACACCTGCTGTTTACTC 27659
| | | | | ||| || ||||||||| | || |||||||| || | || |
Sbjct 420 CTTAATTATGCTCACTCATCA--CAGTACGACGCAGAGCAAGAACACCTTCTCTACACGC 477
Query 27660 CGTTGTTCAAAGCGGATAAC-GCCAGAGTTTTCGACCTTGAAGTTGAATCGTCAACTGG 27717
| | ||||| || |||||| || || | ||||| | ||| | ||| | ||||| ||
Sbjct 478 CACTTTTCAAGGCTGATAACAACCTGA-TATTCGATTTCGAATTAGAAGCATCAACAGG 535
>seq250077
Length=544
Score = 87.8 bits (96), Expect = 4e-13
Identities = 89/116 (77%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 28018 CAGTCGTATCTGCTTTACGTTATCGCACAGGGCACTGATGTTGGTAACGTGGCTAACAAG 28077
||| | ||||| ||||| ||| || || || || || | ||||| || ||| ||
Sbjct 442 CAGCCTTATCTACTTTATGTTGTCCAGCAAGGTACCGACTTAGGTAATGTTGCTGGTAAA 383
Query 28078 GCCAACGAGGCTGGTCAGGGCGCTTACGATGCCCAGGTAAAAAACGATGAACAGGA 28133
||||||||||| |||||||| ||||||||||||||||| || || || || |||||
Sbjct 382 GCCAACGAGGCAGGTCAGGGTGCTTACGATGCCCAGGTGAAGAATGACGAGCAGGA 327
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 122032427424804
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |