Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq89394 187 2e-42 seq49094 111 1e-19 seq51813 105 5e-18 seq38040 91.5 1e-13 >seq89394 Length=1369 Score = 187 bits (206), Expect = 2e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 13216 ACTGGCCCCGTTGTATGAAGCAGAGACCCGAGCAGATGGCGGATGCCGGTTTCTTCTACA 13275 ||||||| || | |||||||||| |||||| | | || || || || |||||||||| Sbjct 698 ACTGGCCTCGCAGCATGAAGCAGAAACCCGAAGAACTCGCAGAGGCGGGATTCTTCTACA 757 Query 13276 CTGGCTACGGTGACAATACAAAGTGCTTCTATTGTGACGGCGGATTGAAAGATTGGGAGC 13335 | ||| | |||||||| || ||||||||||| ||||||||||| | || || |||||| Sbjct 758 CCGGCCAGGGTGACAAAACTAAGTGCTTCTACTGTGACGGCGGGCTCAAGGACTGGGAGA 817 Query 13336 CGGAAGATGTACCTTGGGAACAGCATGTAAGATGGTTCGACCGTTGCGCCTACGTTCAGC 13395 || || || || ||||| ||||| | | ||||||||||| ||||| ||||| |||| Sbjct 818 ACGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGACCGGTGCGCTTACGTCCAGC 877 Query 13396 TAGTCAAGGGTAGAGACTACGTACAGAAAGTCATCACGGAAGCCTGCG 13443 | || ||||| ||||||| |||||||| || |||||||| || |||| Sbjct 878 TGGTAAAGGGCCGAGACTATGTACAGAAGGTGATCACGGAGGCGTGCG 925 >seq49094 Length=1117 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||||| || ||||||||||| || || || ||| ||| | || || Sbjct 665 ACCAAGTGCAAAGTTGATTCCTTCTGAATATTATAATCTGACAGCGTACGACCATCTTCT 606 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || |||||||| || || || | || ||||||||||||||| | ||| || ||||| | Sbjct 605 AGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCGGGAGGAATACCTTCTTTGTCTTGA 546 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 |||||| |||||| | | | || | | ||||| |||| |||||||| ||| Sbjct 545 ATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAATGTAATCGTTTTG 486 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| ||||| ||||| |||||||| Sbjct 485 CCAGTCAGTGTCTTTACAAAAATTTGCAT 457 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||| || | | || |||||||||| || ||||||||||| || ||||| | Sbjct 227 CCACCCCTAAGGCGTAGCACCAAGTGCAAAGTCGATTCCTTCTGAATATTATAGTCTGAC 168 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 ||| ||| | || |||||||| ||||||||||| || || | ||||| || ||||| Sbjct 167 AGTGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATTAATCTTTGTTGATCTGGAGGA 108 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || |||||||| ||| ||| ||| || | | | | || | | ||||| Sbjct 107 ATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTCTCGATTGTATCAGAAGCTTCCACT 48 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| || || || ||||| ||||| || || ||||| |||||||| Sbjct 47 TCCAATGTGATAGTTTTGCCGGTCAGTGTTTTAACAAAAATTTGCAT 1 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||| | || ||| ||||||| || ||||||||||| |||||||| Sbjct 455 CCACCTCTCAGCCGTAGTACTAAGTGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGAT 396 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 ||| ||| | || || || || ||||| || || || | | ||||| || || || Sbjct 395 AGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGTTGATCTGGGGGA 336 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||||| || ||| ||||||| |||||| | | | || | | ||||| Sbjct 335 ATGCCCTCTTTATCCTGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACT 276 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| || || |||||||| ||||| ||||| ||||| |||||||| Sbjct 275 TCCAGTGTGATAGTCTTGCCTGTCAGTGTCTTTACAAAAATTTGCAT 229 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||| | | ||| || |||| || ||||||||||| |||||||| | Sbjct 911 CCACCTCTCAGACGCAGTACTAAATGCAAGGTAGATTCCTTCTGAATATTGTAGTCTGAC 852 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 ||| || | || || || || ||||| || || || | | || || || || || Sbjct 851 AGTGTACGTCCATCTTCGAGCTGCTTTCCAGCAAAAATTAGTCTTTGCTGATCTGGGGGA 792 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | ||||| || ||| ||||||| |||||| | | | || | | ||||| Sbjct 791 ATGCCCTCTTTATCCTGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACT 732 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| || || |||||||| ||||| ||||| ||||| |||||||| Sbjct 731 TCCAGTGTGATAGTCTTGCCTGTCAGTGTCTTTACAAAAATTTGCAT 685 >seq51813 Length=3444 Score = 105 bits (116), Expect = 5e-18 Identities = 620/985 (63%), Gaps = 21/985 (2%) Strand=Plus/Plus Query 6369 CAATCTCCCTGTAGTCCACCACACCCTCCTCCCAAGTGCCTTTCACTTTACCCGTCGCCA 6428 ||||||||||||| |||||||| || || | |||||| ||||| || || || || Sbjct 367 CAATCTCCCTGTAATCCACCACTCCGTCTTGCCAAGTACCTTTGACAGGTCCAGTAGCGT 426 Query 6429 CCCCACTAAACAGATTGTTGTTCGTGTAATTCGTCACACCCGACCACCCCCTGCCGTACA 6488 || | || || |||||| ||||| || || | ||| || | || |||| Sbjct 427 TGCCTGTGAAGGGAATGTTGTCTTCGTAATCATGAACGCCAGTCCAACCACGACCATACA 486 Query 6489 TAGCCACCCCCACCACCAACTTGCCACTGTTCACACTCTGGTTCAACAAACGCCTCAACG 6548 | || || || | || | ||| | ||||| | ||| ||||||| | | Sbjct 487 TGGCAACACCTAATACAATCTTCTTAGGATTCACTCCCTGTGCCAACAAATATTTTACTC 546 Query 6549 CAAAGTCTGTGGTGTAGTTTTCGTGGGTTTTCCACGACGGTGGATACAGAGGTGCGTGGT 6608 | ||||| | ||||| |||| | || ||||| | || | |||| |||| || | Sbjct 547 CGAAGTCAGATGTGTAAGTTTCCTTGGGATTCCATGCAGGCGCGTACAATGGTGTTTGAT 606 Query 6609 AGCCCAGATCCGTCATC-GACCACGCACCCTTGTAATCGTAGTTCATCACGAAAATGTAG 6667 || ||| ||||| ||||| || |||||| | || ||| |||||| |||||| | Sbjct 607 GTCCAAGAGT-GTCATTTGACCAGGCTCCCTTGAAGTCATAGCTCATCAAGAAAATATGA 665 Query 6668 TCGAGATACTGTTGGCACTGTTTGTAGTCGACCACGTCTATCTTGTCGTAACCACCGCTG 6727 || | ||| | ||| || |||||| || || | || || || | ||| ||| Sbjct 666 TCCATATAATTTTGAGCCTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGAGCTA 725 Query 6728 ATGGCGCTCGTCAACTGCAATCTCCGGCCCGTCTTCTCCTCCAGCTCGTCCAACATTTGT 6787 || || ||||| | || || ||| |||| | ||||| || | ||| | Sbjct 726 ATAGCAGAAGTCAATTCGTATTTCTTGCCATTCTTAGCTGAGAGCTCATCGAGCATCTCA 785 Query 6788 CTCAAATCGCTCAGCAGCTGTACATAGGTGT-AC--TTGTCGGTGTCAGCATCGCCCAAC 6844 | || || ||| || ||||||| | || | || | | | || | Sbjct 786 CGTAATTCTTTCATCAAACTTACATAGCAATCACCATCTTCTGGGCTA------CCGAGG 839 Query 6845 TTGTCGTTCGCTCCCTTTCCTCCCGGAAACTCCCAGTCAATATCCACTCCGTCGAAAAAC 6904 | ||| || || || || || ||||||||||| || ||||| || || ||||| || Sbjct 840 TCAGGGTTAGCACCTTTGCCACCAGGAAACTCCCAATCGATATCTACACCATCGAAGAAT 899 Query 6905 TTCCACGTCTCCAGAAACTCGCGCACGCTCTGCACAAACACCCGACGCTTGGCGGAGTCG 6964 ||||| || |||||||| || ||||||||| | ||| | | | Sbjct 900 TTCCATGTTAGAAGAAACTCCTTTACTGACTGCACAAATCGTGTTCTCTTAG---ATTTA 956 Query 6965 TGCATCTT----GTAGAAGGGGTCGCTAAGCGTCCACCCGCCTATGGAGGGTAGTATAGT 7020 | || || | | || || ||| |||||||||||| || || ||||| || || | Sbjct 957 T-CAACTAAAAAGAAAAAAGGATCGGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTT 1015 Query 7021 CAGATTGGGGTTGTGGTGTTTGATGGCCATCAGCTGGCCAAAATTACCCTTATACGGCTC 7080 || | ||| | ||||| | | ||| | ||||| || || || || || ||||| Sbjct 1016 CAATTCCGGGCGGGCTTGTTTTAGTGACATTAATTGGCCGAAGTTGCCTTTGTAGGGCTC 1075 Query 7081 GTCGTACGCCTCCACACCCTTTTGTGGTTTCTGTACGGCGCCCCACAAATCGTGTATACT 7140 || | | || || ||||||||||| |||| || |||| |||||| || Sbjct 1076 GTTCCATGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGA 1135 Query 7141 CACTTTGAAATCGTCTCGGCCCGCGCACGATCTTTGCAACGCTT-CAAACGACCCCGGCA 7199 ||||| || || || ||||| || || | ||||| |||| |||| || | | Sbjct 1136 GACTTTAAAGTCCTCACGGCCGCTACAGGACCGTTGCAGTGCTTGGAAACTGCCTTCG-A 1194 Query 7200 CCTGTTTCAAGGCGTCGTTGAGTCCGTCTCCCCCGCAAATGGGCACAAATCCGTACAGCA 7259 || ||| ||| ||| || | ||||| || ||||||||||| | ||| || || |||| Sbjct 1195 TCTCTTTTAAGCTGTCATTTATGCCGTCACCGCCGCAAATGGGAATAAAGCCATAGAGCA 1254 Query 7260 AATGGCTGAGATTGGGCACGGGCACCTTGTCTGCGGGAAACTGCCGTCCGTACACACCCC 7319 |||| | ||||| || | || | || |||| |||| | || ||||||| Sbjct 1255 AATGAGTAAGATTAGGTATAGGTATACGATCCACGGGGAACTTTCTAGGATAGACACCCC 1314 Query 7320 ACTCCACAAAGTACGCCGCCACCAC 7344 | || || ||||| || |||| || Sbjct 1315 ATTCTACGAAGTAGGCGCCCACAAC 1339 >seq38040 Length=2861 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 45127 TACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTC 45186 ||||||||| || ||| ||| |||||||| ||||| || || |||| | || || Sbjct 1798 TACCAAGTGAAGGGTGGACTCTTTCTGAATATTGTAATCAGACAAAGTGCGACCATCTTC 1857 Query 45187 CAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGC 45246 || ||| || || || ||||| | ||||||||||| || || | || ||||| ||| Sbjct 1858 CAATTGCTTACCAGCAAATATGAGACGCTGTTGGTCTGGGGGGATGCCTTCCTTATCCTG 1917 Query 45247 AATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTT 45306 ||||| ||| || | | | |||| || || |||| |||||| ||||| Sbjct 1918 TATTTTAGCCTTCACATTCTCGATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTCTT 1977 Query 45307 GCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| || |||||||| |||||||| Sbjct 1978 TCCTGTCAATGTTTTCACAAATATTTGCAT 2007 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 || |||| ||| | | |||| ||| || ||| || || ||||||||||||||| Sbjct 2465 CCTCCTCGCAAACGCAGCACCAGGTGGAGGGTGGATTCTTTTTGAATGTTGTAGTCGGAA 2524 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || ||| |||| |||| ||| ||||| || || ||||| || ||||| || ||||| Sbjct 2525 AGGGTGCGGCCGTCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGA 2584 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || || ||||| |||||| |||||| | | |||| | | || || Sbjct 2585 ATGCCTTCTTTGTCTTGAATTTTAGCCTTAACATTTTCAATTGTGTCAGAAGCTTCAACT 2644 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || | ||||| || || || || || || || ||||| |||||||| Sbjct 2645 TCTAACGTAATTGTTTTTCCTGTAAGTGTTTTAACAAAAATTTGCAT 2691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 393762453755398