Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq51813 178 1e-39 seq38040 107 1e-18 seq98588 104 2e-17 seq49094 100 2e-16 seq89394 91.5 1e-13 >seq51813 Length=3444 Score = 178 bits (196), Expect = 1e-39 Identities = 461/697 (66%), Gaps = 7/697 (1%) Strand=Plus/Plus Query 91180 TCGTTCGGGTTCCATTGCGGGGCGTATAGTGTCGTTTGATAGCCCAAATCGGTATTTGAC 91239 || || || |||||| || ||||| | || ||||||| || | | | ||||||| Sbjct 567 TCCTTGGGATTCCATGCAGGCGCGTACAATGGTGTTTGATGTCCAAGAGTGTCATTTGAC 626 Query 91240 CAAGCTCCTTTAAAATCGTAAGTCATGACATATATTTTACTCAAAAACTTTTGTGCAGCG 91299 || ||||| || || || || |||| | | || | | || | | ||||| || | Sbjct 627 CAGGCTCCCTTGAAGTCATAGCTCATCAAGAAAATATGATCCATATAATTTTGAGCCTTG 686 Query 91300 TCATAATCGACAAGTTCGATCTTGTCATAACCGGCACCGATTGCGCTTGTCAATTCGTAC 91359 | || || |||| || ||| || || | || | | || || ||||||||||| Sbjct 687 CCGTAGTCAACAACTTGGATTTTATCCCATCCAGAGCTAATAGCAGAAGTCAATTCGTAT 746 Query 91360 ACTTTACCTGTTTGTGCTTGCAAATCATCCAACATGTCACGCAACTCTTTTAGCAAAACA 91419 || || | | ||| | ||||| | ||| ||||| || ||||| | |||| Sbjct 747 TTCTTGCCATTCTTAGCTGAGAGCTCATCGAGCATCTCACGTAATTCTTTCATCAAACTT 806 Query 91420 ATGTATGTAGCAGCGTCGCGTTTCGGATCGCCAATGGCCGGATTAGCGCCTTTACCGCCC 91479 | || | || | || | | || | || | | | || ||||| ||||| || || Sbjct 807 ACATAGCAATCACCATCT--TCTGGGCTA-CCGAGGTCAGGGTTAGCACCTTTGCCACCA 863 Query 91480 GGAAATTCCCAATCAATATCTACACCGTCAAAAAATTTCCAAACTTGCAAAAATTCTTTA 91539 ||||| |||||||| ||||||||||| || || |||||||| | | | ||| || || Sbjct 864 GGAAACTCCCAATCGATATCTACACCATCGAAGAATTTCCATGTTAGAAGAAACTCCTTT 923 Query 91540 ACCGAATCAACGAA-CACGTT-TCTTCGTTTGACATCGTGCATAAAATAGAACGGGTCCG 91597 || || | || || | ||| |||| | || | || | ||| | || || || | Sbjct 924 ACTGACTGCACAAATCGTGTTCTCTTAGATTTA--TCAACTAAAAAGAAAAAAGGATCGG 981 Query 91598 ACAAAGTCCAGCCACCGATGGACGGTAAAACTTTTAAATGCGGGTTGGCCAACTTGGCGG 91657 | ||||| ||||| || || || | || || || | |||| ||| || | Sbjct 982 CAAGCGTCCACCCACCAATAGAGGGAAGAATCTTCAATTCCGGGCGGGCTTGTTTTAGTG 1041 Query 91658 CCATTATCTGACCAAAGTTGCCCTTGTAAGGCTCGTTCCAAGCGGATACACCTTTTTGTG 91717 ||||| || || |||||||| ||||| ||||||||||| | || | |||||||||| Sbjct 1042 ACATTAATTGGCCGAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAATCCTTTTTGTG 1101 Query 91718 GTTTTTGTATGGCTGCCCACGGATCGTGTATGGAAACTTTAAAATCATCGCGTCCTTTGC 91777 ||||||||| |||||||| |||||||| || || |||||||| || || || || | | Sbjct 1102 GTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTAAAGTCCTCACGGCCGCTAC 1161 Query 91778 ACGATCGTTGCAAATTTTCAAAACTACCAGGTATTGTTTTGAGGGCATCGTTTAATCCAT 91837 | || ||||||| || ||||| || || ||| | | || |||| || | Sbjct 1162 AGGACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAGCTGTCATTTATGCCGT 1221 Query 91838 CGCCTCCGCAAATGGGTATAAAACCGTACAACAGATG 91874 | || ||||||||||| ||||| || || | || ||| Sbjct 1222 CACCGCCGCAAATGGGAATAAAGCCATAGAGCAAATG 1258 >seq38040 Length=2861 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||| || || | ||||||| |||||| || || ||||| ||||| ||||| || | | Sbjct 1781 CCTCCTCGCAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGAATATTGTAATCAGAC 1840 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || || |||||||||||| || || ||| | || || | ||||| || ||| Sbjct 1841 AAAGTGCGACCATCTTCCAATTGCTTACCAGCAAATATGAGACGCTGTTGGTCTGGGGGG 1900 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | |||||||||||| |||| ||| || | | | |||||| || || | Sbjct 1901 ATGCCTTCCTTATCCTGTATTTTAGCCTTCACATTCTCGATTGTGTCAGATGGTTCTACT 1960 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | ||| ||| | || || ||||||||||| ||||| |||||||| Sbjct 1961 TCCAGGGTAATGGTCTTTCCTGTCAATGTTTTCACAAATATTTGCAT 2007 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 ||||| | |||||| || |||||||||||||| |||||||| | | || || |||| Sbjct 2252 AGTACTAGGTGAAGGGTAGATTCTTTTTGAATATTGTAGTCAGATAGGGTGCGACCATCT 2311 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||||||| || || ||| ||||||| | ||||||||| || | ||||| || || Sbjct 2312 TCCAATTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGAGGGATACCTTCTTTGTCT 2371 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 |||| ||| || | | ||| |||||| ||||| || | || ||| | Sbjct 2372 TGGATTTTAGCCTTTACATTTTCAATTGTGTCAGATGGCTCCACCTCTAGAGTTATGGTC 2431 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || || || | ||| || ||||| |||||||| Sbjct 2432 TTTCCTGTTAGTGTCTTGACAAATATTTGCAT 2463 Score = 95.1 bits (104), Expect = 9e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || ||||||||||||||||||||||||| | || | ||| Sbjct 2480 AGCACCAGGTGGAGGGTGGATTCTTTTTGAATGTTGTAGTCGGAAAGGGTGCGGCCGTCT 2539 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||||||| || || ||| | || | | ||||||||| || | |||||| || || Sbjct 2540 TCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCT 2599 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 ||||| ||| || | | ||| |||||| | || ||| | || || || Sbjct 2600 TGAATTTTAGCCTTAACATTTTCAATTGTGTCAGAAGCTTCAACTTCTAACGTAATTGTT 2659 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || || || | |||||| |||||||||||||| Sbjct 2660 TTTCCTGTAAGTGTTTTAACAAAAATTTGCAT 2691 >seq98588 Length=355 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| || || || | | ||||| |||||| || ||||||||||||||||||||||||| Sbjct 341 TCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGA 282 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | || || |||||||||||| || || ||| ||||||| | || ||||| || Sbjct 281 AAGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGG 222 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | ||| || || || |||| | || || || | | ||| ||| ||| ||| || Sbjct 221 GATGCCCTCTTTGTCTTGGATTT-TAGCTTTTACGTTTTCAATAGTATCAGAGGGTTCCA 163 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| | || ||| | || || || | ||||| |||||||| ||||| Sbjct 162 CTTCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 114 >seq49094 Length=1117 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 ||||| | ||| | || ||||| || ||||| |||||||| | | ||| | |||| Sbjct 440 AGTACTAAGTGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGATAGTGTGCGTCCATCT 381 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 || | || || || ||| | ||||||||||||||||| ||| | ||| || ||||| Sbjct 380 TCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGTTGATCTGGGGGAATGCCCTCTTTATCC 321 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 ||||| | ||| || | | ||| || ||| | || ||| | ||||| | Sbjct 320 TGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACTTCCAGTGTGATAGTC 261 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||||| |||| ||| |||||||||||||||||| Sbjct 260 TTGCCTGTCAGTGTCTTTACAAAAATTTGCATT 228 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| |||| || | || |||| ||| | || ||||| || ||||| || ||||| | Sbjct 228 TCCACCCCTAAGGCGTAGCACCAAGTGCAAAGTCGATTCCTTCTGAATATTATAGTCTGA 169 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 || ||| | |||||||| ||| || || || | || | |||||||||||| || Sbjct 168 CAGTGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATTAATCTTTGTTGATCTGGAGG 109 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||||||||| || ||| | | ||| || | | | || ||| | || Sbjct 108 AATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTCTCGATTGTATCAGAAGCTTCCAC 49 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| | ||||| |||||||||||| |||||| |||||||||||||| Sbjct 48 TTCCAATGTGATAGTTTTGCCGGTCAGTGTTTTAACAAAAATTTGCAT 1 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188 || ||||| || ||||| |||||||| | || ||| | |||||| | || || || Sbjct 881 GTAGATTCCTTCTGAATATTGTAGTCTGACAGTGTACGTCCATCTTCGAGCTGCTTTCCA 822 Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTG 18248 ||| | || |||||||| ||||| ||| | ||| || ||||| ||||| | ||| Sbjct 821 GCAAAAATTAGTCTTTGCTGATCTGGGGGAATGCCCTCTTTATCCTGAATTTTTGCCTTA 762 Query 18249 ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTT 18308 || | | ||| || ||| | || ||| | ||||| | ||||| |||| ||| Sbjct 761 ACATTTTCAATTGTATCAGAAGCTTCCACTTCCAGTGTGATAGTCTTGCCTGTCAGTGTC 702 Query 18309 TTTACAAAAATTTGCATT 18326 |||||||||||||||||| Sbjct 701 TTTACAAAAATTTGCATT 684 >seq89394 Length=1369 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 20153 AACCAACGTGCGTGTTGTTCCCATGGAATGTCATCATTTTCCCAATCTTTAAGGCCGCCA 20212 ||||| || ||||| || ||||| || | ||| || || ||||| || || || ||||| Sbjct 854 AACCAGCGCGCGTGCTGCTCCCACGGCACGTCGTCGTTCTCCCAGTCCTTGAGCCCGCCG 795 Query 20213 TTGCAATAAAAACACAAAGTTTTATCACCGCGCGACGTATAATAAAATCCCGCTTCGGCC 20272 | || || || ||| |||||| ||||| | || || | |||||||| || || Sbjct 794 TCACAGTAGAAGCACTTAGTTTTGTCACCCTGGCCGGTGTAGAAGAATCCCGCCTCTGCG 735 Query 20273 AATTCATCGGGCCTTTGCTTCATGCTGCGCGGCCA 20307 | ||| ||||| | |||||||||||||| ||||| Sbjct 734 AGTTCTTCGGGTTTCTGCTTCATGCTGCGAGGCCA 700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 378083525003310