Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq59246 331 1e-85 seq157294 215 6e-51 seq10486 212 8e-50 seq229742 95.1 2e-14 seq55316 95.1 2e-14 >seq59246 Length=1357 Score = 331 bits (366), Expect = 1e-85 Identities = 701/1037 (68%), Gaps = 18/1037 (2%) Strand=Plus/Plus Query 62775 CCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATA 62834 || |||||||||||||||||||| | || ||| |||| || ||| ||||| || | | Sbjct 92 CCCTGAACACCAATACCGATAGGACGGTGCCTCATATTTGAAGTTTTTGCTTCAGGGACA 151 Query 62835 GGATAATAATTAATATCTATAATTTTATTGAGATTTC---TGACAATTACTTTGACCACA 62891 |||||| | |||| ||| || | ||| || | |||| | ||||| ||| | Sbjct 152 GGATAAAAGTTAACATCAATGACTTTGTTTAAATTTTGAGTCACAAT--CTTAGTGGTT- 208 Query 62892 TCCTTCAGTTTGAGAAAATCAAATCGCCCATCTATTACAAACATGTTCAATGCAACAGAT 62951 || || | ||| ||||| |||| | || | ||||||||||| | ||| | || Sbjct 209 TCTTTTAATTTTTTAAAATGAAATTGATTATTTTCAACAAACATGTTAAGTGCTATGGAA 268 Query 62952 GCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGA 63011 || || || ||||| || || ||||| | | ||||| | | ||||||||||||| Sbjct 269 GCAAGGTTGCACACTGCCACTTCATTTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGA 328 Query 63012 TTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTA 63071 || ||||| || ||||| || | ||||| |||||||||||| |||| || ||||||||| Sbjct 329 TTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTCCTGTTGCAAGCATCCTTA 388 Query 63072 TAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACT 63131 || | || |||| |||||||| || | |||| ||||||||| | ||||| | || Sbjct 389 TACAACATATATGGTGTACCAGTCTCCACTTGAGCTTCTATAATTGACTTCCATAACTCT 448 Query 63132 CGAGCCTTTATTATAGATTTGTATCTCCTTTCTCTT--TCGTATAGAGTATACAATCGTT 63189 |||| | | | | ||| || | ||| |||| || ||| | ||| | | || Sbjct 449 TGAGCTCTGACTT--GTTTTATAAACCGTTTTTCTTCTTCATATTTGGCATATAGTTCTT 506 Query 63190 CGAACTCGTCTCCCCAAACATTGTCCAAT-CTAGGACATTCATCCGGACACATCAACGAC 63248 |||| || ||||| || || | ||| | ||||| |||| |||||||| | | Sbjct 507 CGAATTCCTCTCCATAA-CAGTCAGCAAGGCCGGGACAATCATGAGGACACATGAGACTC 565 Query 63249 CACTCTCCGTCATCCTTCACT---CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA 63305 || ||| |||||||| || | ||||||||| ||||| || ||||| | ||| | Sbjct 566 CAATCT---TCATCCTTTTCTACCCTTTTCATAAACAGATCTGGTATCCATAAAGCATAA 622 Query 63306 AATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCC 63365 || || ||||| | || ||| || || ||||| |||||||| | ||| | |||| | Sbjct 623 AACAGTTCTCTAGCTCGCATTTCTTCCTTACCTGTGTTCTTTTTTAAATCTAAGAACTCA 682 Query 63366 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCT 63425 | || || | |||||| ||||| ||||| || || | | || || |||||||| || Sbjct 683 AATATGTCCGCATGCCAAGGTTCTAAGTAAATTGCAAATGCACCGGGACGTTTGTTGCCA 742 Query 63426 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTT 63485 || ||||||| ||||| || || || || || |||||||||||||| | | ||| || Sbjct 743 CCTTGATCTACATATCTGGCAGTATTGTTGTACACTCTCAACATTGGCACTAGACCATTC 802 Query 63486 GATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGA 63545 || | ||||| || || | ||||| || || | |||| | | || | Sbjct 803 GAAACCCCATTAGTGCCAGCTATATAAGACCCTTGAGCTCTAATACAATGTGTATGTAAA 862 Query 63546 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCT 63605 ||||| || ||||| |||||| |||||||| ||| ||||||| || ||| | || ||| Sbjct 863 CCTATGCCACCTGCAGATTTAGAAATTAATGCACATTGTTTTAAAGTATCAAAAATACCT 922 Query 63606 TCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTT 63665 || || ||||| || |||| | || || ||| || | || | || | || Sbjct 923 TCAATACTATCGTCTTTCATAGCTATAAGGAAGCAGGAGGAAAGCTGTGGCCGCGGTGTA 982 Query 63666 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 63725 | || || || ||||| || || ||||| |||| || || | | ||| || Sbjct 983 GCTGCTGAGAACAATGTAGGGCTTGCATGTGTAAAATATTTCTCTGACATCATATTATAA 1042 Query 63726 GTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 63785 || | || || || || || |||||| ||||| | ||| | ||| | |||| Sbjct 1043 GTATTGATTGCACTATCAATGTCTTCACCATGAATCCCTACGGAGACTCTCATAAGCATG 1102 Query 63786 TGCTGAGGTCTTTCAAC 63802 || |||||||||||||| Sbjct 1103 TGTTGAGGTCTTTCAAC 1119 >seq157294 Length=2047 Score = 215 bits (238), Expect = 6e-51 Identities = 673/1030 (65%), Gaps = 33/1030 (3%) Strand=Plus/Plus Query 62686 AATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGAT 62745 |||| || |||||||| || || ||||| ||| |||||| | || ||||| | || Sbjct 814 AATACATCGTTTCAAATATTTTTGAATTTAAGTCTCTTGCTTCTTGACTGTCAAACGCAT 873 Query 62746 AATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 62805 | | | || ||| || || |||| ||| || | |||||| || |||||||| |||| Sbjct 874 ATCTCATAAGGCAAAATGCATCTGCTAGTCCCTGTATACCAATTCCTATAGGTCTGTGTC 933 Query 62806 TCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGA 62865 || ||||| || | |||| || ||||||| | | |||||||| | | || | Sbjct 934 TCATATTACTTCTTCTACATTCTTCAACAGGATAAAATGTTGTATCTATACATCTGTTAA 993 Query 62866 GATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTA 62925 ||||||| ||||||||| || || | | ||||| ||| |||||| |||| | Sbjct 994 GATTTCTTGTAATTACTTTAACTACTTGCGATAGTTTTTCAAAGTCAAATTTTTCATCAA 1053 Query 62926 TTACAAACATGTTCAATGCAACAGAT-GCCAGATTACACACGGCTACCTCATTAGCATCC 62984 | ||||| | ||| ||| | | |||| |||||| || |||| ||||| || Sbjct 1054 TGACAAATTTTGACAAA-CAAATGCTCGCCAAATTACAAACTGCTATTTCATTTTTGTCA 1112 Query 62985 GCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGA 63044 | ||||| || || || | |||||||| | | || || || ||||||||||||||| Sbjct 1113 GAATATTCGATAATTTCCGCACAAAGATTTGAAGATTTTATTGTACCTAAATTTTGTTGA 1172 Query 63045 TTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGA 63104 ||||| ||||||| | || |||||||| || | || ||||| ||||| | || Sbjct 1173 TTACTTAGCCTGTTACAAGTGTCTTTATAAAGCATATAAGGTGTACCCGTTTCTAATTGT 1232 Query 63105 GATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTTTCT 63164 | ||||||||| |||||||| | || ||| |||| | || || ||| | || | Sbjct 1233 GCTTCTATAATGGCTTTCCATAACTTTCTAGCTTTTACAACAG--TTCTAT-TTTTTATT 1289 Query 63165 CTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGA 63224 |||| ||| ||| ||| | || || ||||||||||||| |||||| Sbjct 1290 TTTTCATATTTGCAATATAATTTATTAAAATCTTCTCCCCAAACAT-----CATCTAGAC 1344 Query 63225 CAT-----TCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAA 63279 | | || | ||||| | || ||||||||| | | | | ||||||| ||||| Sbjct 1345 CTTTTGCCTCGTTTGGACAGAATAAAGACCACTCTTCATTTTTATCTACTCGTTCCATAA 1404 Query 63280 AGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTG 63339 | | ||| ||||| | |||||| || | ||||| | |||| || || | | | Sbjct 1405 ATAAGTCATTTATCCATAAAGCTATGAAAACGTCTCTAGCTCTAATGTCTTCACTGCTGG 1464 Query 63340 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 63399 |||| ||| | | ||| | ||| | | ||| || ||||| ||||| || || || | Sbjct 1465 TATTTTTTCTTAAATCTAAGAAATCGAAAATGTCTTTGTGCCAAGGTTCTAAATAAATTG 1524 Query 63400 CCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 63459 | | | | | | ||| |||| || |||| ||| ||| | ||| | ||| | Sbjct 1525 CGACACTACTTGATCTTTTACTTCCGCCTTGATTTATATATTTTCTGGTATAATTCATGA 1584 Query 63460 CTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGG-AGATAT---AGCC- 63514 || | || |||||| || || | || || ||||| || ||| | || Sbjct 1585 CTTGTATCAGTGGAATTATTCC------TCGACTCTTTCCACCGGCAGCTATTAAATCCG 1638 Query 63515 -TCCACTGGCACGAATA--TTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 63571 |||| | | |||| | | ||||||| |||||||| || | |||||| || Sbjct 1639 ATCCATTACTTCTAATACTGTGCAAATTGAT--GCCTATTCCACCGGAATATTTAGAAAT 1696 Query 63572 TAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAG 63631 | |||||| |||||| |||||||| || | |||||| ||| || || | | Sbjct 1697 GACTGCGCACTGTTTTATAGTGTCATAAATTCTTTCTATTGAATCTTCAATAGGACTCAT 1756 Query 63632 TAGAAAACAGCTAGACATTTGGTGACGAG-TAGTTCCCGCATTAAATAAGGTAGGAGAAG 63690 || |||||| || | || || ||||| | | || | || ||| ||||| || || | || Sbjct 1757 TAAAAAACAACTTGCCAATT-GTGACCTGTTTGTACACGAATTTAATAAAGTTGGTGTAG 1815 Query 63691 CGTGCGTAAA 63700 |||| || || Sbjct 1816 CGTGAGTGAA 1825 >seq10486 Length=2602 Score = 212 bits (234), Expect = 8e-50 Identities = 463/685 (68%), Gaps = 13/685 (2%) Strand=Plus/Plus Query 62028 ATTTTATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAG 62087 |||||| | ||||| | || || ||||| | | | ||| ||||| || ||| ||| Sbjct 1921 ATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGTGTAAGTAG 1980 Query 62088 TACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAA 62147 |||||||| ||||||| ||| | |||| ||| ||||| || ||||||||| | Sbjct 1981 TACATTCCTGTTTTTAAACCCATCTTCCAAGCGTGGAAATGAATCGACGTTAGTTTCCCA 2040 Query 62148 TAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTG 62207 || | || | || | ||| || || | |||||||||||| || || || || || || Sbjct 2041 TAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAATGCCCCTCTA 2100 Query 62208 TCTGCAGCCATTTTTATGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATA-AACTCG 62266 || || ||||| | |||| || || ||| ||| ||||| | ||||| || || || Sbjct 2101 TCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTATAAATCT 2160 Query 62267 CTTAATATCTTCTGGAAGGTTTGTA--TTC-TGAATGGATCCACCATCTACCATAATCCT 62323 ||| || |||| || | ||| | ||| || || |||||| | ||||| Sbjct 2161 CTT-ATTTCTTTAGGGATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAAG 2219 Query 62324 ATTCTTGATCTCATCATTCCATAATTTTCTCTCG-GTTAAAACTCTAAGGAGATGCGGGT 62382 ||| || || || |||| |||||| | || | || ||| | | || ||||| ||| Sbjct 2220 ATTTTTCATATCTTCATCCCATAA-ATCAGCTAGAGTCAAATCAGTCAGAAGATGATGGT 2278 Query 62383 TAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTT 62442 | ||||| | ||||||||||| || ||||| | ||||||||| ||| | |||| Sbjct 2279 TCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAATGGTT 2338 Query 62443 CCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCA 62502 | | || ||| | || || | |||||| ||||| || ||||||||||||||||| | || Sbjct 2339 CAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGTGCTATCA 2398 Query 62503 ATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGATGTTCCCAATTCCA 62560 ||| | ||| | | ||| ||||| || || || ||||| || |||| ||||| Sbjct 2399 ATAGAGAATTCCGCAAACC--ATGTTTTGCTATCTTTTCTTTGAGGACAGCCCAGTTCCA 2456 Query 62561 AAGATCCGACGGTACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGC-GTACG 62619 ||| || | || ||| || || ||||| | || || | || Sbjct 2457 AAGGTCTGTAGGAGTTTTGACCCACATATCATACTGGAGGATACCTTGGCTAGCTGGAC- 2515 Query 62620 ATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATG 62679 |||| |||||| |||| ||||| || || |||| || |||||| || ||||||| Sbjct 2516 TTCCTTGATATGTGCTGTATGCGCCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATG 2575 Query 62680 CACCGTAATAAATGGTTTCAAAGAT 62704 |||| |||||||| |||||||| || Sbjct 2576 CACCATAATAAATTGTTTCAAATAT 2600 >seq229742 Length=505 Score = 95.1 bits (104), Expect = 2e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 64017 ttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCC 64076 || || || || || |||| ||| ||||| ||||||||||| || | |||||||||||| Sbjct 250 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCA 309 Query 64077 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTT 64136 ||||| | ||| || ||| ||||| ||||| || || ||| | || | || | ||| Sbjct 310 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 369 Query 64137 GTTACTCCATTATATATTCC 64156 ||||| ||| |||||| || Sbjct 370 GTTACACCAGAATATATGCC 389 >seq55316 Length=1040 Score = 95.1 bits (104), Expect = 2e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 34068 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 34127 ||||||| || |||||||| | |||||||| ||||| || || ||||||||||| | | Sbjct 466 TTAGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 407 Query 34128 CAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162 || ||||| |||||||||||||||| ||||| || Sbjct 406 CATATGTCTGGATATTGGATTGGGAATATAACGAA 372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627671197364640