Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq157294 327 1e-84 seq59246 307 1e-78 seq10486 196 4e-45 seq55316 134 1e-26 seq210326 95.1 1e-14 >seq157294 Length=2047 Score = 327 bits (362), Expect = 1e-84 Identities = 940/1422 (66%), Gaps = 44/1422 (3%) Strand=Plus/Plus Query 36790 TCAACTGTGAATTTTATAG--GATTTGATGCCGATTTTGTTCTCATATAATACATTCCAG 36847 ||||| || |||||||| | || | || || | | ||||||| |||||||||||| | Sbjct 167 TCAACCGTAAATTTTATCGCTGAAGTAAT--CGGTCTAGTTCTCAAATAATACATTCCTG 224 Query 36848 TTTTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGAT 36907 |||||| || | | | | |||||||||||||| ||| ||||| ||||| || | Sbjct 225 TTTTTAATCCACTTTTGTAAGCATAAAAATGCATACTACTCAATTTTGAATATGTTGGTT 284 Query 36908 TATCTAT--ATATATT--GTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCT 36963 | | ||| ||| || |||| ||||| |||| || || | ||| || Sbjct 285 GCGCAACGAATAAATTTAGTGATTG--TGACT--GATCAATGAAAAGTTGACGGTCTGCC 340 Query 36964 GCCATTTCTAAAATACATTTTTGAGAT--ATCTCCCAAACCGTTTTATATATTTGTTTTA 37021 |||| || || ||||||||| | | || | |||| | ||||| || | || ||| | Sbjct 341 GCCAAATC--AATTACATTTTTCATTTTAATTTTCCAAGCTGTTTTGTAAAGTTTTTTAA 398 Query 37022 TATTATCTGGTAAATCT---AAATGTTGAATAGAACCATTATGTAACACAATTGTATTCT 37078 | | || ||||| || | | || |||||| ||||| | || | | ||| ||| | Sbjct 399 TGTCATTTGGTATATTTTTAATATTTTGAATTGAACCTTCATATTCAATGATTAAATTTT 458 Query 37079 TTATGTCATTATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAA 37138 | || |||| ||||| ||| | |||| ||| |||| | | | ||| |||| Sbjct 459 TCATTTCATGTGACCACAAGTTTAATTTAATTAAATCTTTCAACAAATATTCATTGACAA 518 Query 37139 CCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGG 37198 | ||| || |||| | ||| || || || || ||| |||| | ||||||| Sbjct 519 TTTTAAATTCACCAGCATGTGTTCTCCTCGTGTAAATGTTGGAAGTAAAAGGTTCAAAAC 578 Query 37199 ACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGC 37258 | ||||||||| | |||||||| || ||| || |||||||| || || |||| | | Sbjct 579 ATTCATTATTATTAAATATTTGTGAGGTACTGGCGGTAGGCATAGGAGCAATTAATAAAC 638 Query 37259 TATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATC-CCATAAATCT 37317 |||| || | || || | || ||| | || | || | | ||| | |||| ||| Sbjct 639 TATTCCTAACGCCGTGATTTTTTATTTTAATTCTAAGATTTTCCCATTTTCCATG--TCT 696 Query 37318 GTTGGGTTCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTA 37377 | || ||| |||| ||| | || | ||| |||| || || || | | | Sbjct 697 GGAATTTTTTTTCCGCACAATTCAAAATGAAAAATTCCTTG-CTAATAGGCAAACCTTCA 755 Query 37378 TATGTCTCATAAGGTCCGTAAATT--TTAGCTAGTTCGCAACTAGATTCTAGTGCGGCAT 37435 |||| || || ||||| ||||| || || | ||| || ||| | || | | Sbjct 756 TATGATTCGTATGGTCC--AAATTCTTTCGCCAATTCAACGCTTTCTTCCAAGGCAGAAA 813 Query 37436 AATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCAT 37495 |||| || ||||| || |||| | |||||| | ||||||||| || || || |||| Sbjct 814 AATACATCGTTTCAAATATTTTTGAATTTAAGTCTCTTGCTTCTTGACTGTCAAACGCAT 873 Query 37496 AGCCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTT 37555 | | || | ||| |||| || | ||||| | ||| || ||||| ||||| ||| Sbjct 874 ATCTCATAAGGCAAAATGCATCTGCTAGTCCCTGTATACCAATTCCTATAGGTCTGTGTC 933 Query 37556 TCTTATTAGATCTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTA 37615 || ||||| ||| ||||| || |||||| | | ||||||| | | || | Sbjct 934 TCATATTACTTCTTCTACATTCTTCAACAGGATAAAATGTTGTATCTATACATCTGTTAA 993 Query 37616 GATTTTTAACTAGTATTTTCGT-AATTATTCTCAAC---TTGTCGAACATAAATACGTTA 37671 ||||| || ||| || | | || || | | | || || || |||| | | Sbjct 994 GATTT----CTTGTAATTACTTTAACTACTTGCGATAGTTTTTCAAAGTCAAATTTTTCA 1049 Query 37672 TTATTAACAAATTTACTCAACGAAATAGATC-CTAGATTACATACAGCAACTTCATCTTC 37730 | | | |||||||| ||| |||| | || | | |||||| || || | ||||| || Sbjct 1050 TCAATGACAAATTTTGACAAACAAAT-GCTCGCCAAATTACAAACTGCTATTTCATTTTT 1108 Query 37731 GTTACTAAATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCT 37790 || | | ||| ||||| || | ||| ||||| ||| | ||||| || ||||| Sbjct 1109 GTCAGAATATTCGATAATTTCCGCACAAAGATTTGAAGATTTTATTGTACCTAAATTTTG 1168 Query 37791 TTGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTAT 37850 |||||| | | ||||||| |||||||| || ||||| || || || ||||| Sbjct 1169 TTGATTACTTAGCCTGTTACAAGTGTCTTTATAAAGCATATAAGGTGTACCCGTTTCTAA 1228 Query 37851 TTGAGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAACGATCGCTTTAAttttttt 37910 ||| || || ||||| | ||||||||| |||| ||||| || | | | || |||||| Sbjct 1229 TTGTGCTTCTATAATGGCTTTCCATAACTTTCTAGCTTTTACAACAGTTCTA--TTTTTT 1286 Query 37911 CTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCC 37970 ||| |||| |||| ||||||||| |||||||| | ||||| ||||| || || Sbjct 1287 ATTT-TTTCATATTTGCAATATAATTTATTAAAATCTTCTCCCCAAACATCATCTAGACC 1345 Query 37971 TGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAA 38030 | ||| |||||| | || |||||| ||||||| ||| ||||| ||||||||||| Sbjct 1346 TTTTGCCTCGTTTGGACAGAATAAAGACCACTCTTCATTTTTATCTACTCGTTCCATAAA 1405 Query 38031 TAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTAC 38090 ||| ||| || |||||| || | || | ||| | | |||| ||||| | | Sbjct 1406 TAAGTCATTTATCCATAAAGCTATGAAAACGTCTCTAGCTCTAATGTCTTCACTGCTGGT 1465 Query 38091 ATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAAT--C 38148 ||| |||||||| || |||||||| || || |||||| ||||||| |||||| | Sbjct 1466 ATTTTTTCTTAAATCTAAGAAATCGAAAATGTCTTTGTGCCAAGGTTCTAAATAAATTGC 1525 Query 38149 GACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATAT 38190 |||| | || || ||||||| || || ||||| |||||| Sbjct 1526 GACACTACT--TGATCTTTTACTTCCGCCTTGATTTATATAT 1565 >seq59246 Length=1357 Score = 307 bits (340), Expect = 1e-78 Identities = 754/1127 (67%), Gaps = 22/1127 (2%) Strand=Plus/Plus Query 37434 ATAATATATTGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCG-AATG 37492 |||||| |||||||| || |||||| ||| | | | |||||| || || ||| || | Sbjct 1 ATAATAAATTGTTTCAAATATTTGTTGATTAAGGAGTATTGCTTTCTCACTTTCGTAAGG 60 Query 37493 CATAGCCCAATAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTAT 37552 || | || || | ||| ||| |||| |||||||||||| ||||| || || | | Sbjct 61 TATT-CTCATCAACACAAATGTATCTGCCATACCCTGAACACCAATACCGATAGGACGGT 119 Query 37553 GTTTCTTATTAGATCTAGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTAT 37612 | || |||| || | | ||| || |||||| | || | ||| || | ||| | Sbjct 120 GCCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGTTAACATCAATGACTTTGT 179 Query 37613 TTAGATTTTTAACTAGTATTTTCGTAATTATTCTCAACTTGTCGAACATAAATACGTTAT 37672 ||| ||||| | | || || || || | | || || | || |||| |||| Sbjct 180 TTAAATTTTGAGTCACAATCTTAGTGGTTTCTTTTAATTTTTTAAAATGAAATTGATTAT 239 Query 37673 TATTAACAAATTTACTCAACGAAATAGATCCTAGATTACATACAGCAACTTCATCTTCGT 37732 | | |||||| | | | | || || | || || || || || ||||||| ||| Sbjct 240 TTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATTTTCTG 299 Query 37733 TACTAAATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTT 37792 | | |||| | || ||| || || ||||| || || |||| || || | ||| ||| Sbjct 300 AAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTT 359 Query 37793 GATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTT 37852 |||| || | || |||| ||| ||||| | ||||| || || || || | || Sbjct 360 GATTACTCTTCCTGTTGCAAGCATCCTTATACAACATATATGGTGTACCAGTCTCCACTT 419 Query 37853 GAGCCTCGATAATAGATTTCCATAAACTTCTTG--CTTTAACGATCGCTTTAAtt----t 37906 |||| || ||||| || |||||||| ||||| || | || | | |||| | Sbjct 420 GAGCTTCTATAATTGACTTCCATAAC--TCTTGAGCTCTGAC--TTGTTTTATAAACCGT 475 Query 37907 ttttCTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATA-CA-TC-GC 37963 ||||||| ||| |||| ||||| || | || || | | ||||| || || || Sbjct 476 TTTTCTTC--TTCATATTTGGCATATAGTTCTTCGAATTCCT--CTCCATAACAGTCAGC 531 Query 37964 ATAATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTT 38023 | | || ||||| || |||||||| ||| ||| |||||||| |||||||| | || Sbjct 532 A-AGGCCGGGACAATCATGAGGACACATGAGACTCCAATCTTCATCCTTTTCTACCCTTT 590 Query 38024 CCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGT 38083 |||||| | ||| |||| |||||| ||| ||| | ||| | | || |||||| | Sbjct 591 TCATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCGCATTTCTTCCT 650 Query 38084 TCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATAT 38143 | ||| |||||| |||| || || || ||||| || || ||||| ||||||| | Sbjct 651 TACCTGTGTTCTTTTTTAAATCTAAGAACTCAAATATGTCCGCATGCCAAGGTTCTAAGT 710 Query 38144 AAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTAT 38203 |||| | | ||| || || | ||| | || || |||| | |||||| | || || | Sbjct 711 AAATTGCAAATGCACCGGGACGTTTGTTGCCACCTTGATCTACATATCTGGCAGTATTGT 770 Query 38204 TATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAG 38263 | || | ||| ||||| || |||| |||||| || || || | || | |||||||| Sbjct 771 TGTACACTCTCAACATTGGCACTAGACCATTCGAAACCCCATTAGTGCCAGCTATATAAG 830 Query 38264 TACCCTT-AGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATT 38322 |||||| ||||| ||| | | | || ||||| ||||||||| ||| || ||| Sbjct 831 -ACCCTTGAGCTCTAATACAATGTGTATGTAAACCTATGCCACCTGCAGATTTAGAAATT 889 Query 38323 AAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGT 38382 || || ||||||||||| |||||||| |||||||| ||||| || || || || | || Sbjct 890 AATGCACATTGTTTTAAAGTATCAAAAATACCTTCAATACTATCGTCTTTCATAGCTATA 949 Query 38383 ATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCA 38442 | || || || | || ||| || || | || || |||||||| |||| Sbjct 950 AGGAAGCAGGAGGAAAGCTGTGGCCGCGGTGTAGCTGCTGAGAACAATGTAGGGCTTGCA 1009 Query 38443 TGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCG 38502 ||| | || |||| || |||| |||||| || | ||| || ||| || || | Sbjct 1010 TGTGTAAAATATTTCTCTGACATCATATTATAAGTATTGATTGCACTATCAATGTCTTCA 1069 Query 38503 CCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549 || ||||| |||| || || ||||| ||||| ||||| |||||||| Sbjct 1070 CCATGAATCCCTACGGAGACTCTCATAAGCATGTGTTGAGGTCTTTC 1116 >seq10486 Length=2602 Score = 196 bits (216), Expect = 4e-45 Identities = 445/661 (67%), Gaps = 15/661 (2%) Strand=Plus/Plus Query 36805 ATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGCCCCAATCTC 36864 |||| ||||| ||| | |||||| | || |||||||| ||||||| |||| || Sbjct 1948 ATAGCATTTGCTGCTGGTTTTGTGTGTAAGTAGTACATTCCTGTTTTTAAACCCATCTTC 2007 Query 36865 CATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTGTC 36924 || ||| ||||| || || ||||| | || |||| ||| | | || ||| | Sbjct 2008 CAAGCGTGGAAATGAATCGACGTTAGTTTCCCATAGTTAGGTTTAGCAACATGTATGTTA 2067 Query 36925 ATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTT 36984 | ||||||||||| |||||||| || ||||| || |||||||| | || | || || Sbjct 2068 AAAGATTGACTTTGGTCTATAAATGCCCCTCTATCAGCTGCCATCTGTA---TGGATGTT 2124 Query 36985 T---GAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCTAAA 37041 | | || |||||||| || ||||| |||| | | |||| | | || | | | | Sbjct 2125 TTCAGTGAAATCTCCCATACGGTTTTGTATAAATCTCTTATTTCTTTAGGGATTTTTTCA 2184 Query 37042 ---TGTTGAATAGAACCATTATGTAACACAATTGTATTCTTTATGTCATTATTCCACATA 37098 | ||| ||||| ||||| | | | ||| ||| || || || | || ||| | | Sbjct 2185 ATTTCTTGTATAGATCCATTGTTGTATATAATAAGATTTTTCATATCTTCATCCCATAAA 2244 Query 37099 TTT-CTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAA 37157 | ||| | | || ||| || || | || || || |||| ||||||||||| Sbjct 2245 TCAGCTAGAG-TCAAATCAGTCAGAAGATGATGGTTCACTACAGGAAATTCTCCAGATAA 2303 Query 37158 TACTCTTCTT--GTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAAT 37215 ||||||||| ||| |||| ||| | ||| ||||||||| || ||| | || | | Sbjct 2304 GACTCTTCTTTGGTAAATAT-TTGAT-GTAAATGGTTCAAAAGATTCAGTGTTGCCAAGA 2361 Query 37216 ATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGT 37275 ||||| | ||||| ||||| ||||| |||||||| | || ||| | ||| |||||| Sbjct 2362 ATTTGTGCAGTAGAGGCAGTCGGCATAGGTGCTATCAATAGAGAATTCCGCAAACCATGT 2421 Query 37276 GTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTAACCAC 37335 | || | | ||| || || ||| | ||| | ||||| || | || | |||| Sbjct 2422 TTTGCTATCTTTTCTTTGAGGACAGCCCAGTTCCAAAGGTCTGTAGGAGTTTTGACCCAC 2481 Query 37336 ATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCG 37395 |||||||| || || ||||||| || |||||| | | |||||| || | || Sbjct 2482 ATATCATACTGGAGGATACCTTGGCTAGCTGGACTTCCTTGATATGTGCTGTATGCGCCT 2541 Query 37396 TAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATT 37455 | ||| |||| ||| ||||||| ||||| ||| ||||||| |||||||| || ||| Sbjct 2542 TCTTTTTCTGCTAATTCACAACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATT 2601 Query 37456 T 37456 | Sbjct 2602 T 2602 >seq55316 Length=1040 Score = 134 bits (148), Expect = 1e-26 Identities = 169/228 (74%), Gaps = 8/228 (4%) Strand=Plus/Minus Query 11882 TCTATATTATCTCTTACATATGTATCTATTAATAAACTATACATTTCTGAATGAATATTT 11941 ||| || ||| |||| ||| || || ||||||||| ||||| |||||||||| |||| Sbjct 817 TCTTTAGGATCCCTTATATAAGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTT 758 Query 11942 TCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACACT-GTACATCCACATA 12000 ||||| || |||||||| |||||||| || | || || | |||| | || || | Sbjct 757 TCCATTGCAATTTGAAACCCATAGAAGCACCTGGCTTCAGT-CACTTGAACCTCTTGTGA 699 Query 12001 AAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGATGCAAAAAATGCTAGTAT 12060 || | ||| |||| |||||||| |||||||||||| || ||||| ||||||| | Sbjct 698 GAAACGCTCCACTAAGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGAC 639 Query 12061 ATGTTTTATAAAGTATTTTTCG---TCTTTAGTTAATTTATCCCAATC 12105 |||||| ||||| | ||| ||| |||| ||||| | |||||||| Sbjct 638 ATGTTTGATAAAATGTTTCTCGCAATCTT---TTAATGTCTCCCAATC 594 >seq210326 Length=301 Score = 95.1 bits (104), Expect = 1e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 11666 ATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATA 11725 || |||||||| || ||||||||||||||||||||||||||||| | ||||||||| Sbjct 43 ATAAGTTCATTGCTGAAAGTTAATCCGGGCATCAATCCTCGTTTTTTCAACCAAAATATT 102 Query 11726 GCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGC 11772 | |||||| || || || |||||| |||| || || ||||| || Sbjct 103 GAAGCAAAGCTGCCTGAGAAAAATATTTCCTCAACTGCCGCAAAAGC 149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 466928079194720