Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq59246 325 5e-84 seq157294 228 1e-54 seq10486 210 3e-49 seq229742 91.5 2e-13 seq55316 86.0 8e-12 >seq59246 Length=1357 Score = 325 bits (360), Expect = 5e-84 Identities = 705/1046 (67%), Gaps = 18/1046 (2%) Strand=Plus/Plus Query 65559 TCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCT 65618 ||||| | || |||||||||||||||||||| | || ||| |||| || ||| ||| Sbjct 83 TCTGCCATACCCTGAACACCAATACCGATAGGACGGTGCCTCATATTTGAAGTTTTTGCT 142 Query 65619 TCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC---TGACAATTACT 65675 || || | ||||||| | |||| ||| || | ||| || | |||| | ||||| || Sbjct 143 TCAGGGACAGGATAAAAGTTAACATCAATGACTTTGTTTAAATTTTGAGTCACAAT--CT 200 Query 65676 TTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCTCATCTATTACAAACATGTTCAAT 65735 | | || || | ||| ||||| |||| | | || | ||||||||||| | | Sbjct 201 TAGTGGTT-TCTTTTAATTTTTTAAAATGAAATTGATTATTTTCAACAAACATGTTAAGT 259 Query 65736 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 65795 || | || || || || || || || || ||||| | | ||||| | | |||| Sbjct 260 GCTATGGAAGCAAGGTTGCACACTGCCACTTCATTTTCTGAAGTGTATTGCACAACCTCA 319 Query 65796 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 65855 ||||||||||| ||||| || || || || | ||||| |||||||||||| |||| || Sbjct 320 GTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTCCTGTTGCAA 379 Query 65856 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 65915 ||||||||||| | || |||| |||||||| || | |||| ||||||||| | ||| Sbjct 380 GCATCCTTATACAACATATATGGTGTACCAGTCTCCACTTGAGCTTCTATAATTGACTTC 439 Query 65916 CAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTT--TCGTATAGTGTAT 65973 || | || |||| | | | | ||| || | ||| |||| || ||| | || Sbjct 440 CATAACTCTTGAGCTCTGACTT--GTTTTATAAACCGTTTTTCTTCTTCATATTTGGCAT 497 Query 65974 ACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAAT-CCAGGACATTCATCCGGACAC 66032 | | | |||||| || ||||| || || | ||| || ||||| |||| |||||| Sbjct 498 ATAGTTCTTCGAATTCCTCTCCATAA-CAGTCAGCAAGGCCGGGACAATCATGAGGACAC 556 Query 66033 ATCAACGACCACTCTCCGTCATCCTTCACT---CGTTTCATAAAGAGATCAGGAATCCAA 66089 || | ||| ||| |||||||| || | ||||||||| ||||| || ||||| Sbjct 557 ATGAGACTCCAATCT---TCATCCTTTTCTACCCTTTTCATAAACAGATCTGGTATCCAT 613 Query 66090 AGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCG 66149 | ||| ||| | ||||| | || ||| || || ||||| |||||||| | ||| Sbjct 614 AAAGCATAAAACAGTTCTCTAGCTCGCATTTCTTCCTTACCTGTGTTCTTTTTTAAATCT 673 Query 66150 AGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGT 66209 | |||| | | || || |||||| ||||| ||||| || || | | || || ||| Sbjct 674 AAGAACTCAAATATGTCCGCATGCCAAGGTTCTAAGTAAATTGCAAATGCACCGGGACGT 733 Query 66210 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 66269 ||||| || || ||||||| ||||| || || || || || |||||||||||||| | Sbjct 734 TTGTTGCCACCTTGATCTACATATCTGGCAGTATTGTTGTACACTCTCAACATTGGCACT 793 Query 66270 ATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTA 66329 | |||||| || ||||| || || | ||||| || || | |||| | Sbjct 794 AGACCATTCGAAACCCCATTAGTGCCAGCTATATAAGACCCTTGAGCTCTAATACAATGT 853 Query 66330 ATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCA 66389 | || |||||| || ||||| |||||| |||||||| ||| ||||||| |||||| Sbjct 854 GTATGTAAACCTATGCCACCTGCAGATTTAGAAATTAATGCACATTGTTTTAAAGTATCA 913 Query 66390 TAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGA 66449 | || || || |||||||| || |||| | || || ||| || | || | Sbjct 914 AAAATACCTTCAATACTATCGTCTTTCATAGCTATAAGGAAGCAGGAGGAAAGCTGTGGC 973 Query 66450 CGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGT 66509 || || | || || || ||||| || || ||||| |||| || || | Sbjct 974 CGCGGTGTAGCTGCTGAGAACAATGTAGGGCTTGCATGTGTAAAATATTTCTCTGACATC 1033 Query 66510 AGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGC 66569 | ||| || || | || || || || || |||||| ||||| | ||| | | Sbjct 1034 ATATTATAAGTATTGATTGCACTATCAATGTCTTCACCATGAATCCCTACGGAGACTCTC 1093 Query 66570 ATTAACATGTGCTGAGGTCTTTCAAC 66595 || | |||||| |||||||||||||| Sbjct 1094 ATAAGCATGTGTTGAGGTCTTTCAAC 1119 >seq157294 Length=2047 Score = 228 bits (252), Expect = 1e-54 Identities = 524/783 (67%), Gaps = 11/783 (1%) Strand=Plus/Plus Query 65415 CCTACATATGTATCGTATGGTCC---TTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 65471 ||| |||||| ||||||||||| ||| ||| || | |||| || | || || Sbjct 750 CCTTCATATGATTCGTATGGTCCAAATTCTTTC---GCCAATTCAACGCTTTCTTCCAAG 806 Query 65472 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 65531 ||| |||| || ||||| || || || ||||| ||| |||||| | || ||| Sbjct 807 GCAGAAAAATACATCGTTTCAAATATTTTTGAATTTAAGTCTCTTGCTTCTTGACTGTCA 866 Query 65532 AATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGT 65591 || | ||| | | || ||| || ||||||| ||| || | |||||| || |||||| Sbjct 867 AACGCATATCTCATAAGGCAAAATGCATCTGCTAGTCCCTGTATACCAATTCCTATAGGT 926 Query 65592 CTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 65651 || |||||| ||||| || | |||| || ||||||| | | |||||||| | Sbjct 927 CTGTGTCTCATATTACTTCTTCTACATTCTTCAACAGGATAAAATGTTGTATCTATACAT 986 Query 65652 TTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGC 65711 | || |||||||| ||||||||| || || | | ||||| ||| |||||| Sbjct 987 CTGTTAAGATTTCTTGTAATTACTTTAACTACTTGCGATAGTTTTTCAAAGTCAAATTTT 1046 Query 65712 TCATCTATTACAAACATGTTCAATGCAACAGAT-GCCAGATTACAAACGGCTACCTCATT 65770 ||||| || ||||| | ||| ||| | | |||| ||||||||| |||| ||||| Sbjct 1047 TCATCAATGACAAATTTTGACAAA-CAAATGCTCGCCAAATTACAAACTGCTATTTCATT 1105 Query 65771 AGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATT 65830 || | ||||| || || || | |||||||| | | || || || |||||||| Sbjct 1106 TTTGTCAGAATATTCGATAATTTCCGCACAAAGATTTGAAGATTTTATTGTACCTAAATT 1165 Query 65831 TTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTC 65890 |||||||||||| ||||||| | || |||||||| || | || ||||| ||||| Sbjct 1166 TTGTTGATTACTTAGCCTGTTACAAGTGTCTTTATAAAGCATATAAGGTGTACCCGTTTC 1225 Query 65891 AATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCT 65950 | || | ||||||||| |||||||| | || ||| |||| | || || ||| | Sbjct 1226 TAATTGTGCTTCTATAATGGCTTTCCATAACTTTCTAGCTTTTACAACAG--TTCTAT-T 1282 Query 65951 CTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAA 66010 ||| | |||| ||| ||| ||| | || || ||||||||||||| || | Sbjct 1283 TTTTATTTTTTCATATTTGCAATATAATTTATTAAAATCTTCTCCCCAAACATCATCTAG 1342 Query 66011 TCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCAT 66070 || || | ||||| | || ||||||||| | | | | ||||||| ||| Sbjct 1343 ACCTTTTGCCTCGTTTGGACAGAATAAAGACCACTCTTCATTTTTATCTACTCGTTCCAT 1402 Query 66071 AAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCC 66130 ||| | ||| ||||| | |||||| || | ||||| | |||| || || | | Sbjct 1403 AAATAAGTCATTTATCCATAAAGCTATGAAAACGTCTCTAGCTCTAATGTCTTCACTGCT 1462 Query 66131 TGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATAT 66190 ||||| ||| | | ||| | ||| | | ||| || | ||||| ||||| || || || Sbjct 1463 GGTATTTTTTCTTAAATCTAAGAAATCGAAAATGTCTTTGTGCCAAGGTTCTAAATAAAT 1522 Query 66191 GGC 66193 || Sbjct 1523 TGC 1525 >seq10486 Length=2602 Score = 210 bits (232), Expect = 3e-49 Identities = 462/685 (67%), Gaps = 13/685 (2%) Strand=Plus/Plus Query 64821 ATTTTATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAG 64880 |||||| | ||||| | || || ||||| | | | ||| ||||| || ||| ||| Sbjct 1921 ATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGTGTAAGTAG 1980 Query 64881 TACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAA 64940 |||||||| ||||||| ||| | |||| ||| ||||| || ||||||||| | Sbjct 1981 TACATTCCTGTTTTTAAACCCATCTTCCAAGCGTGGAAATGAATCGACGTTAGTTTCCCA 2040 Query 64941 TAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTG 65000 || | || | || | ||| || || | |||||||||||| || || || || || || Sbjct 2041 TAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAATGCCCCTCTA 2100 Query 65001 TCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCG 65059 || || ||||| | |||| || || ||| ||| ||||| | ||||| || || || Sbjct 2101 TCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTATAAATCT 2160 Query 65060 CTTAATATCTTCTGGAAGGTTTGTA--TTCT-GAATGGATCCACCATCTGCCATAATCCT 65116 |||| | |||| || | ||| | |||| | || |||||| | ||||| Sbjct 2161 CTTATT-TCTTTAGGGATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAAG 2219 Query 65117 ATTCTTGATCTCATCATTCCATAATTTTCTCTCG-GTTAAAACTCTAAGGAGATGCGGAT 65175 ||| || || || |||| |||||| | || | || ||| | | || ||||| | | Sbjct 2220 ATTTTTCATATCTTCATCCCATAAATCAG-CTAGAGTCAAATCAGTCAGAAGATGATGGT 2278 Query 65176 TAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTT 65235 | ||||| ||||||||||||| || ||||| | ||||||||| ||| | |||| Sbjct 2279 TCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAATGGTT 2338 Query 65236 CCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCA 65295 | | ||| ||| | || || | |||||| ||||| || ||||||||||||||||| | || Sbjct 2339 CAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGTGCTATCA 2398 Query 65296 ATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCA 65353 ||| | ||| | | ||| ||||| || || || ||||| || |||| ||||| Sbjct 2399 ATAGAGAATTCCGCAAACC--ATGTTTTGCTATCTTTTCTTTGAGGACAGCCCAGTTCCA 2456 Query 65354 AAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACG 65412 ||| || | || || || ||||| | || || | || Sbjct 2457 AAGGTCTGTAGGAGTTTTGACCCACATATCATACTGGAGGATACCTTGGCTAGCTGGAC- 2515 Query 65413 ATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATG 65472 |||| |||||| ||||| ||||| || || |||| ||||||||| || ||||||| Sbjct 2516 TTCCTTGATATGTGCTGTATGCGCCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATG 2575 Query 65473 CACCGTAATAAATGGTTTCGAAGAT 65497 |||| |||||||| ||||| || || Sbjct 2576 CACCATAATAAATTGTTTCAAATAT 2600 >seq229742 Length=505 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 66810 TTTTTTGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCC 66869 || || || ||||| |||| ||| |||| |||||||| || || | |||||||||||| Sbjct 250 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCA 309 Query 66870 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTT 66929 ||||| | ||| || ||| ||||| ||||| || || ||| | || | || | ||| Sbjct 310 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 369 Query 66930 GTTACTCCATTATATATTCC 66949 ||||| ||| |||||| || Sbjct 370 GTTACACCAGAATATATGCC 389 >seq55316 Length=1040 Score = 86.0 bits (94), Expect = 8e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 36644 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 36703 ||||||| || |||||||| | |||||||| ||||| || || ||||||||||| | | Sbjct 466 TTAGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 407 Query 36704 CAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738 || ||||| ||||||| ||||| || ||||| || Sbjct 406 CATATGTCTGGATATTGGATTGGGAATATAACGAA 372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655929763551920