Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq51813 214 2e-50 seq38040 138 1e-27 seq98588 123 2e-23 seq49094 105 7e-18 seq22409 105 7e-18 >seq51813 Length=3444 Score = 214 bits (236), Expect = 2e-50 Identities = 650/984 (66%), Gaps = 34/984 (3%) Strand=Plus/Plus Query 20330 CAATCTGCCGGTAATCGACCACACCGTCTTCCCAAGTGCCGGCGACGGGACCGGTGGCCG 20389 |||||| || |||||| ||||| ||||||| |||||| || ||| || || || || Sbjct 367 CAATCTCCCTGTAATCCACCACTCCGTCTTGCCAAGTACCTTTGACAGGTCCAGTAGCGT 426 Query 20390 TGCCCGCGAAAGGATTATCACTATCGC--TCTTCA-CACCGGTCCAACCGCGCCCGTACA 20446 |||| | ||| ||| | | ||| || | | | || |||||||| || || |||| Sbjct 427 TGCCTGTGAAGGGAATGTTGTCTTCGTAATCATGAACGCCAGTCCAACCACGACCATACA 486 Query 20447 TTGCTACACCCAGTGCAATTTTACTT----TTTGGTACGTGTTGCGCGAGCAACGCTTCT 20502 | || ||||| | | |||| || ||| || | | ||| || | ||| || | Sbjct 487 TGGCAACACCTAATACAATCTT-CTTAGGATTCACTCCCTGT---GCCAACAAATATTTT 542 Query 20503 ACGGCACGATCTGCGCAATAAGGTTCGTCGGGTTTCCAGGCGGGTGCAAACAATGCGGTT 20562 || | || | |||| ||| | ||| ||||| || || || |||||| ||| Sbjct 543 ACTCCGAAGTCAGATGTGTAAGTTTCCTTGGGATTCCATGCAGGCGCGTACAATGGTGTT 602 Query 20563 TGATGTCCCAGATCCGTAGTGGACCAGGCTCCTTTGAAATCGTACGACATTAAGAATATG 20622 |||||||| ||| | | ||||||||||| ||||| || || ||| ||||| || Sbjct 603 TGATGTCCAAGAGTGTCATTTGACCAGGCTCCCTTGAAGTCATAGCTCATCAAGAAAATA 662 Query 20623 GTATCGAGGTATTTTTGCGCTTCGGTGTAATCGACCACAGCAATCTTATCGTCGCCCGCG 20682 ||| | || ||||| || | | ||| || || || || ||||| || | | Sbjct 663 TGATCCATATAATTTTGAGCCTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGAG 722 Query 20683 CTTATCGCGCTCGTCAACAGATAGTAACGATTGTGATGTAT-GCCGAGGGCG--TCGAGC 20739 || || || ||||| | ||| ||| || | || ||| || |||||| Sbjct 723 CTAATAGCAGAAGTCAAT---TCGTATTTCTTGCCATTCTTAGCTGAGAGCTCATCGAGC 779 Query 20740 ATGCCGCGAAGTTCACGCAGCAGGATCGTGTACGTGGC--TCGATCGCGTTCGGCGTCGC 20797 || | || | ||| || || | ||| | || || | | ||| | | | Sbjct 780 ATCTCACGTAATTCTTTCATCAAACT----TACATAGCAATC-ACCATCTTCTGGGCTAC 834 Query 20798 CGACATTGGGGTTCGCGCCATTGCCGCCCGGAAACTCCCAATCAATGTCGACGCCATCAA 20857 ||| | ||||| || || ||||| || |||||||||||||| || || || ||||| | Sbjct 835 CGAGGTCAGGGTTAGCACCTTTGCCACCAGGAAACTCCCAATCGATATCTACACCATCGA 894 Query 20858 AGAATTTCCACGTTTCTAGATACTCTTGGACCGAATCGATAAA-CGT-TTGGCGCACGAT 20915 |||||||||| ||| ||| |||| | || || | | ||| ||| || | | ||| Sbjct 895 AGAATTTCCATGTTAGAAGAAACTCCTTTACTGACTGCACAAATCGTGTTCTCTTA-GAT 953 Query 20916 CTTGTCGTGCATATGGAAAAATGGGTCCGAAAGTGTCCAGCCCCCGATAGACGGTAACAC 20975 || || | | |||||| || || | ||| ||||| || || ||||| || | | Sbjct 954 -TTATCAACTAAAAAGAAAAAAGGATCGGCAAGCGTCCACCCACCAATAGAGGGAAGAAT 1012 Query 20976 TTTGAGATGCGGGTTCGCCAATTTCGCGGCCATAAGTTGGCCAAAGTTGCCTTTGTACGG 21035 || | | |||| || ||| | ||| | |||||| |||||||||||||| || Sbjct 1013 CTTCAATTCCGGGCGGGCTTGTTTTAGTGACATTAATTGGCCGAAGTTGCCTTTGTAGGG 1072 Query 21036 TTCGTTCCATGCGCTGACA--CCTTTCTGGGGTTTCTGTATGGCCGCCCACGGATCGTGA 21093 ||||||||| | |||| ||||| || ||||| |||| || ||||| |||||||| Sbjct 1073 CTCGTTCCAT--GAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGG 1130 Query 21094 ATGGCCACCTTAAAGTCGGCACGGCCCGCGCACGAACGTTGCAACGCTTCGAAACTGCCC 21153 || | || |||||||| ||||||| || || ||||||| |||| ||||||||| Sbjct 1131 ATTGAGACTTTAAAGTCCTCACGGCCGCTACAGGACCGTTGCAGTGCTTGGAAACTGCCT 1190 Query 21154 GGGA-CACTTTTGAGCGCATCGTTGATGCCTTCGCCTCCGCACATGGGCACGAAACCGTA 21212 || | ||||| ||| || || ||||| || || ||||| ||||| | || || || Sbjct 1191 TCGATCTCTTTTAAGC-TGTCATTTATGCCGTCACCGCCGCAAATGGGAATAAAGCCATA 1249 Query 21213 CAACAAATGCGACAAGTTCGGTGTGGGCACTTTATCGACGGGAAACTGGCGCGGATACAC 21272 | |||||| | | || ||| | || | ||| ||||| |||| | ||||| || Sbjct 1250 GAGCAAATGAGTAAGATTAGGTATAGGTATACGATCCACGGGGAACTTTCTAGGATAGAC 1309 Query 21273 ACCCCATTCGACAAAGTATGCTCC 21296 ||||||||| || ||||| || || Sbjct 1310 ACCCCATTCTACGAAGTAGGCGCC 1333 >seq38040 Length=2861 Score = 138 bits (152), Expect = 1e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || ||||| ||||||| |||| ||||| ||||| ||||||||||| || || || Sbjct 2237 CCTCCTCGCAAACGCAGTACTAGGTGAAGGGTAGATTCTTTTTGAATATTGTAGTCAGAT 2296 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||| | || ||||||||| |||| |||||||| ||||| ||||| Sbjct 2297 AGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGAGGG 2356 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || ||||||||||| |||||| |||| | ||| | |||||| | ||||||||| Sbjct 2357 ATACCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGATGGCTCCACC 2416 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 || | || | ||||| || || | || || || |||||||||||| || Sbjct 2417 TCTAGAGTTATGGTCTTTCCTGTTAGTGTCTTGACAAATATTTGCATACCT 2467 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || ||||| ||||||| || | ||| | || || |||||||||||||| || ||| Sbjct 2465 CCTCCTCGCAAACGCAGCACCAGGTGGAGGGTGGATTCTTTTTGAATGTTGTAGTCGGAA 2524 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| |||||| | || || |||||| | |||| |||||| ||||| ||||| Sbjct 2525 AGGGTGCGGCCGTCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGA 2584 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716 |||||||||||||| ||| |||| | ||| | | ||| | |||||| | | || || Sbjct 2585 ATGCCTTCTTTGTC-TTGAATTTTAGCCTTAACATTTTCAATTGTGTCAGAAGCTTCAAC 2643 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | || || || || | ||||| || || ||||||||| Sbjct 2644 TTCTAACGTAATTGTTTTTCCTGTAAGTGTTTTAACAAAAATTTGCATA 2692 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || ||||| | ||| | || ||||||| || |||||||| ||||| || ||||| | Sbjct 1781 CCTCCTCGCAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGAATATTGTAATCAGAC 1840 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||| | || ||||||||| | || ||||| || || || || || Sbjct 1841 AAAGTGCGACCATCTTCCAATTGCTTACCAGCAAATATGAGACGCTGTTGGTCTGGGGGG 1900 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 |||||||| || || ||||| || | | || | |||||| | || || || Sbjct 1901 ATGCCTTCCTTATCCTGTATTTTAGCCTTCACATTCTCGATTGTGTCAGATGGTTCTACT 1960 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | ||| | ||||| || ||||| ||||| || |||||||||||| Sbjct 1961 TCCAGGGTAATGGTCTTTCCTGTCAATGTTTTCACAAATATTTGCATA 2008 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || ||||| | ||| | || | |||| |||||||| ||||| ||||| || || Sbjct 2009 CCACCTCGCAGACGTAGTACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAT 2068 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | | ||||| | ||| || || ||| |||| |||||||| ||||| ||||| Sbjct 2069 AAGGTACGCCCATCTTCCAACTGCTTGCCGGCAAAGATGAGACGTTGTTGATCTGGAGGA 2128 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGT-TTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || ||||| || ||| | || | |||| | ||| | || || | |||||||| Sbjct 2129 ATACCCTCTTTATCT-TGAATCTTAGCCTTTACGTTTTCAATGGTATCAGATGGCTCCAC 2187 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 ||| | || | ||||| || || | || || || |||||||||||| || Sbjct 2188 CTCTAGAGTTATAGTCTTTCCTGTTAGTGTCTTGACAAATATTTGCATACCT 2239 >seq98588 Length=355 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | |||||| || ||||||| ||||| |||||||||||||| || ||| Sbjct 340 CCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAA 281 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||| | || ||||||||| |||| ||||| |||||||| || || Sbjct 280 AGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 221 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| |||||||| |||||| ||||| | ||| | || || | ||| ||||| Sbjct 220 ATGCCCTCTTTGTCTTGGATTTTAGCTTTTACGTTTTCAATAGTATCAGAGGGTTCCACT 161 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | ||||| || || | ||||| || || || |||||| Sbjct 160 TCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCATA 113 >seq49094 Length=1117 Score = 105 bits (116), Expect = 7e-18 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| | ||||| ||||| || | ||||| || || ||||| || || || | Sbjct 911 CCACCTCTCAGACGCAGTACTAAATGCAAGGTAGATTCCTTCTGAATATTGTAGTCTGAC 852 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | ||| | || | ||||||||||| || |||||| | || || | ||||||||| || || Sbjct 851 AGTGTACGTCCA-TCTTCGAGCTGCTTTCCAGCAAAAATTAGTCTTTGCTGATCTGGGGG 793 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCA 139715 ||||| ||||| || ||| |||||| ||| | | ||| | ||| || | | |||| Sbjct 792 AATGCCCTCTTTATC-CTGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCCA 734 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 | || | || | |||||||| |||| || ||||| || |||||||| Sbjct 733 CTTCCAGTGTGATAGTCTTGCCTGTCAGTGTCTTTACAAAAATTTGCAT 685 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 |||| || ||||| | || || || || ||||| |||||||| || || | Sbjct 671 CGCAGCACCAAGTGCAAAGTTGATTCCTTCTGAATATTATAATCTGACAGCGTACGACCA 612 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| |||||||| || ||| | || || | || || |||||||| || ||||||||| Sbjct 611 TCTTCTAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCGGGAGGAATACCTTCTTTG 552 Query 139670 TCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 || ||| |||||| ||| | | ||| | ||| || | | ||||| || | || | Sbjct 551 TC-TTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAATGTAAT 493 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| ||||| |||| || ||||| || |||||||| Sbjct 492 CGTTTTGCCAGTCAGTGTCTTTACAAAAATTTGCAT 457 >seq22409 Length=1756 Score = 105 bits (116), Expect = 7e-18 Identities = 146/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTGTTTACC 139626 || || || ||||||||||| || || || ||| | || | ||||| ||||||||||| Sbjct 1467 GTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCA-TCTTCTAGCTGTTTACC 1525 Query 139627 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TT 139685 |||| |||||| ||||||||| || || || || ||||| || || ||| |||| | || Sbjct 1526 AGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATC-TTGAATTTTCGCTT 1584 Query 139686 TTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACG 139745 ||| | ||| | || || | || |||||||| | ||| | || || || || | | Sbjct 1585 TTACATTTTCTATAGTATCAGAGGCTTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGG 1644 Query 139746 TTTTTACGAATATTTGCAT 139764 | || ||||| |||||||| Sbjct 1645 TCTTGACGAAAATTTGCAT 1663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494373426289600