Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25]
272,638 sequences; 241,555,716 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq51813 214 2e-50
seq38040 138 1e-27
seq98588 123 2e-23
seq49094 105 7e-18
seq22409 105 7e-18
>seq51813
Length=3444
Score = 214 bits (236), Expect = 2e-50
Identities = 650/984 (66%), Gaps = 34/984 (3%)
Strand=Plus/Plus
Query 20330 CAATCTGCCGGTAATCGACCACACCGTCTTCCCAAGTGCCGGCGACGGGACCGGTGGCCG 20389
|||||| || |||||| ||||| ||||||| |||||| || ||| || || || ||
Sbjct 367 CAATCTCCCTGTAATCCACCACTCCGTCTTGCCAAGTACCTTTGACAGGTCCAGTAGCGT 426
Query 20390 TGCCCGCGAAAGGATTATCACTATCGC--TCTTCA-CACCGGTCCAACCGCGCCCGTACA 20446
|||| | ||| ||| | | ||| || | | | || |||||||| || || ||||
Sbjct 427 TGCCTGTGAAGGGAATGTTGTCTTCGTAATCATGAACGCCAGTCCAACCACGACCATACA 486
Query 20447 TTGCTACACCCAGTGCAATTTTACTT----TTTGGTACGTGTTGCGCGAGCAACGCTTCT 20502
| || ||||| | | |||| || ||| || | | ||| || | ||| || |
Sbjct 487 TGGCAACACCTAATACAATCTT-CTTAGGATTCACTCCCTGT---GCCAACAAATATTTT 542
Query 20503 ACGGCACGATCTGCGCAATAAGGTTCGTCGGGTTTCCAGGCGGGTGCAAACAATGCGGTT 20562
|| | || | |||| ||| | ||| ||||| || || || |||||| |||
Sbjct 543 ACTCCGAAGTCAGATGTGTAAGTTTCCTTGGGATTCCATGCAGGCGCGTACAATGGTGTT 602
Query 20563 TGATGTCCCAGATCCGTAGTGGACCAGGCTCCTTTGAAATCGTACGACATTAAGAATATG 20622
|||||||| ||| | | ||||||||||| ||||| || || ||| ||||| ||
Sbjct 603 TGATGTCCAAGAGTGTCATTTGACCAGGCTCCCTTGAAGTCATAGCTCATCAAGAAAATA 662
Query 20623 GTATCGAGGTATTTTTGCGCTTCGGTGTAATCGACCACAGCAATCTTATCGTCGCCCGCG 20682
||| | || ||||| || | | ||| || || || || ||||| || | |
Sbjct 663 TGATCCATATAATTTTGAGCCTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGAG 722
Query 20683 CTTATCGCGCTCGTCAACAGATAGTAACGATTGTGATGTAT-GCCGAGGGCG--TCGAGC 20739
|| || || ||||| | ||| ||| || | || ||| || ||||||
Sbjct 723 CTAATAGCAGAAGTCAAT---TCGTATTTCTTGCCATTCTTAGCTGAGAGCTCATCGAGC 779
Query 20740 ATGCCGCGAAGTTCACGCAGCAGGATCGTGTACGTGGC--TCGATCGCGTTCGGCGTCGC 20797
|| | || | ||| || || | ||| | || || | | ||| | | |
Sbjct 780 ATCTCACGTAATTCTTTCATCAAACT----TACATAGCAATC-ACCATCTTCTGGGCTAC 834
Query 20798 CGACATTGGGGTTCGCGCCATTGCCGCCCGGAAACTCCCAATCAATGTCGACGCCATCAA 20857
||| | ||||| || || ||||| || |||||||||||||| || || || ||||| |
Sbjct 835 CGAGGTCAGGGTTAGCACCTTTGCCACCAGGAAACTCCCAATCGATATCTACACCATCGA 894
Query 20858 AGAATTTCCACGTTTCTAGATACTCTTGGACCGAATCGATAAA-CGT-TTGGCGCACGAT 20915
|||||||||| ||| ||| |||| | || || | | ||| ||| || | | |||
Sbjct 895 AGAATTTCCATGTTAGAAGAAACTCCTTTACTGACTGCACAAATCGTGTTCTCTTA-GAT 953
Query 20916 CTTGTCGTGCATATGGAAAAATGGGTCCGAAAGTGTCCAGCCCCCGATAGACGGTAACAC 20975
|| || | | |||||| || || | ||| ||||| || || ||||| || | |
Sbjct 954 -TTATCAACTAAAAAGAAAAAAGGATCGGCAAGCGTCCACCCACCAATAGAGGGAAGAAT 1012
Query 20976 TTTGAGATGCGGGTTCGCCAATTTCGCGGCCATAAGTTGGCCAAAGTTGCCTTTGTACGG 21035
|| | | |||| || ||| | ||| | |||||| |||||||||||||| ||
Sbjct 1013 CTTCAATTCCGGGCGGGCTTGTTTTAGTGACATTAATTGGCCGAAGTTGCCTTTGTAGGG 1072
Query 21036 TTCGTTCCATGCGCTGACA--CCTTTCTGGGGTTTCTGTATGGCCGCCCACGGATCGTGA 21093
||||||||| | |||| ||||| || ||||| |||| || ||||| ||||||||
Sbjct 1073 CTCGTTCCAT--GAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGG 1130
Query 21094 ATGGCCACCTTAAAGTCGGCACGGCCCGCGCACGAACGTTGCAACGCTTCGAAACTGCCC 21153
|| | || |||||||| ||||||| || || ||||||| |||| |||||||||
Sbjct 1131 ATTGAGACTTTAAAGTCCTCACGGCCGCTACAGGACCGTTGCAGTGCTTGGAAACTGCCT 1190
Query 21154 GGGA-CACTTTTGAGCGCATCGTTGATGCCTTCGCCTCCGCACATGGGCACGAAACCGTA 21212
|| | ||||| ||| || || ||||| || || ||||| ||||| | || || ||
Sbjct 1191 TCGATCTCTTTTAAGC-TGTCATTTATGCCGTCACCGCCGCAAATGGGAATAAAGCCATA 1249
Query 21213 CAACAAATGCGACAAGTTCGGTGTGGGCACTTTATCGACGGGAAACTGGCGCGGATACAC 21272
| |||||| | | || ||| | || | ||| ||||| |||| | ||||| ||
Sbjct 1250 GAGCAAATGAGTAAGATTAGGTATAGGTATACGATCCACGGGGAACTTTCTAGGATAGAC 1309
Query 21273 ACCCCATTCGACAAAGTATGCTCC 21296
||||||||| || ||||| || ||
Sbjct 1310 ACCCCATTCTACGAAGTAGGCGCC 1333
>seq38040
Length=2861
Score = 138 bits (152), Expect = 1e-27
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| ||||| ||||||| |||| ||||| ||||| ||||||||||| || || ||
Sbjct 2237 CCTCCTCGCAAACGCAGTACTAGGTGAAGGGTAGATTCTTTTTGAATATTGTAGTCAGAT 2296
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| ||||| | || ||||||||| |||| |||||||| ||||| |||||
Sbjct 2297 AGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGTTGTTGATCTGGAGGG 2356
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| ||||||||||| |||||| |||| | ||| | |||||| | |||||||||
Sbjct 2357 ATACCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGATGGCTCCACC 2416
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768
|| | || | ||||| || || | || || || |||||||||||| ||
Sbjct 2417 TCTAGAGTTATGGTCTTTCCTGTTAGTGTCTTGACAAATATTTGCATACCT 2467
Score = 109 bits (120), Expect = 5e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| ||||| ||||||| || | ||| | || || |||||||||||||| || |||
Sbjct 2465 CCTCCTCGCAAACGCAGCACCAGGTGGAGGGTGGATTCTTTTTGAATGTTGTAGTCGGAA 2524
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| |||||| | || || |||||| | |||| |||||| ||||| |||||
Sbjct 2525 AGGGTGCGGCCGTCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGA 2584
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716
|||||||||||||| ||| |||| | ||| | | ||| | |||||| | | || ||
Sbjct 2585 ATGCCTTCTTTGTC-TTGAATTTTAGCCTTAACATTTTCAATTGTGTCAGAAGCTTCAAC 2643
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | || | || || || || | ||||| || || |||||||||
Sbjct 2644 TTCTAACGTAATTGTTTTTCCTGTAAGTGTTTTAACAAAAATTTGCATA 2692
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| ||||| | ||| | || ||||||| || |||||||| ||||| || ||||| |
Sbjct 1781 CCTCCTCGCAGACGGAGTACCAAGTGAAGGGTGGACTCTTTCTGAATATTGTAATCAGAC 1840
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| ||||| | || ||||||||| | || ||||| || || || || ||
Sbjct 1841 AAAGTGCGACCATCTTCCAATTGCTTACCAGCAAATATGAGACGCTGTTGGTCTGGGGGG 1900
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|||||||| || || ||||| || | | || | |||||| | || || ||
Sbjct 1901 ATGCCTTCCTTATCCTGTATTTTAGCCTTCACATTCTCGATTGTGTCAGATGGTTCTACT 1960
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | ||| | ||||| || ||||| ||||| || ||||||||||||
Sbjct 1961 TCCAGGGTAATGGTCTTTCCTGTCAATGTTTTCACAAATATTTGCATA 2008
Score = 91.5 bits (100), Expect = 1e-13
Identities = 161/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| ||||| | ||| | || | |||| |||||||| ||||| ||||| || ||
Sbjct 2009 CCACCTCGCAGACGTAGTACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAT 2068
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || | | ||||| | ||| || || ||| |||| |||||||| ||||| |||||
Sbjct 2069 AAGGTACGCCCATCTTCCAACTGCTTGCCGGCAAAGATGAGACGTTGTTGATCTGGAGGA 2128
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGT-TTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| || ||||| || ||| | || | |||| | ||| | || || | ||||||||
Sbjct 2129 ATACCCTCTTTATCT-TGAATCTTAGCCTTTACGTTTTCAATGGTATCAGATGGCTCCAC 2187
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768
||| | || | ||||| || || | || || || |||||||||||| ||
Sbjct 2188 CTCTAGAGTTATAGTCTTTCCTGTTAGTGTCTTGACAAATATTTGCATACCT 2239
>seq98588
Length=355
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | |||||| || ||||||| ||||| |||||||||||||| || |||
Sbjct 340 CCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCGGAA 281
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| ||||| | || ||||||||| |||| ||||| |||||||| || ||
Sbjct 280 AGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 221
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
||||| |||||||| |||||| ||||| | ||| | || || | ||| |||||
Sbjct 220 ATGCCCTCTTTGTCTTGGATTTTAGCTTTTACGTTTTCAATAGTATCAGAGGGTTCCACT 161
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | || | ||||| || || | ||||| || || || ||||||
Sbjct 160 TCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCATA 113
>seq49094
Length=1117
Score = 105 bits (116), Expect = 7e-18
Identities = 164/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| | ||||| ||||| || | ||||| || || ||||| || || || |
Sbjct 911 CCACCTCTCAGACGCAGTACTAAATGCAAGGTAGATTCCTTCTGAATATTGTAGTCTGAC 852
Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656
| ||| | || | ||||||||||| || |||||| | || || | ||||||||| || ||
Sbjct 851 AGTGTACGTCCA-TCTTCGAGCTGCTTTCCAGCAAAAATTAGTCTTTGCTGATCTGGGGG 793
Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCA 139715
||||| ||||| || ||| |||||| ||| | | ||| | ||| || | | ||||
Sbjct 792 AATGCCCTCTTTATC-CTGAATTTTTGCCTTAACATTTTCAATTGTATCAGAAGCTTCCA 734
Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
| || | || | |||||||| |||| || ||||| || ||||||||
Sbjct 733 CTTCCAGTGTGATAGTCTTGCCTGTCAGTGTCTTTACAAAAATTTGCAT 685
Score = 95.1 bits (104), Expect = 1e-14
Identities = 152/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609
|||| || ||||| | || || || || ||||| |||||||| || || |
Sbjct 671 CGCAGCACCAAGTGCAAAGTTGATTCCTTCTGAATATTATAATCTGACAGCGTACGACCA 612
Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669
||||| |||||||| || ||| | || || | || || |||||||| || |||||||||
Sbjct 611 TCTTCTAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCGGGAGGAATACCTTCTTTG 552
Query 139670 TCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728
|| ||| |||||| ||| | | ||| | ||| || | | ||||| || | || |
Sbjct 551 TC-TTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAATGTAAT 493
Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||| ||||| |||| || ||||| || ||||||||
Sbjct 492 CGTTTTGCCAGTCAGTGTCTTTACAAAAATTTGCAT 457
>seq22409
Length=1756
Score = 105 bits (116), Expect = 7e-18
Identities = 146/199 (73%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTGTTTACC 139626
|| || || ||||||||||| || || || ||| | || | ||||| |||||||||||
Sbjct 1467 GTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCA-TCTTCTAGCTGTTTACC 1525
Query 139627 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG-TT 139685
|||| |||||| ||||||||| || || || || ||||| || || ||| |||| | ||
Sbjct 1526 AGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATC-TTGAATTTTCGCTT 1584
Query 139686 TTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACG 139745
||| | ||| | || || | || |||||||| | ||| | || || || || | |
Sbjct 1585 TTACATTTTCTATAGTATCAGAGGCTTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGG 1644
Query 139746 TTTTTACGAATATTTGCAT 139764
| || ||||| ||||||||
Sbjct 1645 TCTTGACGAAAATTTGCAT 1663
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494373426289600
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