Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq59246 327 2e-84 seq157294 239 6e-58 seq10486 226 4e-54 seq55316 100 4e-16 seq229742 95.1 2e-14 >seq59246 Length=1357 Score = 327 bits (362), Expect = 2e-84 Identities = 702/1044 (67%), Gaps = 14/1044 (1%) Strand=Plus/Plus Query 79438 TCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCT 79497 ||||| | || |||||||||||||||||||| | || ||| |||| ||| ||| ||| Sbjct 83 TCTGCCATACCCTGAACACCAATACCGATAGGACGGTGCCTCATATTTGAAGTTTTTGCT 142 Query 79498 TCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATTACTTTG 79557 || || | ||||||| | |||| ||| || | ||| || | ||| ||| | | | | Sbjct 143 TCAGGGACAGGATAAAAGTTAACATCAATGACTTTGTTTAAATTT-TGAGTCACAATCTT 201 Query 79558 ACCACATCCTTT-AGTTTGAGAAAATCAAATCGTCCATCTATTACAAACATGTTCAACGC 79616 | | |||| | ||| ||||| |||| | || | ||||||||||| | || Sbjct 202 AGTGGTTTCTTTTAATTTTTTAAAATGAAATTGATTATTTTCAACAAACATGTTAAGTGC 261 Query 79617 GACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGT 79676 | || || || || || || || || ||||| | | ||||| | | ||||| Sbjct 262 TATGGAAGCAAGGTTGCACACTGCCACTTCATTTTCTGAAGTGTATTGCACAACCTCAGT 321 Query 79677 GCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGC 79736 ||| || || ||||| ||||| || || | ||||| |||||||||||| |||| || || Sbjct 322 GCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTCCTGTTGCAAGC 381 Query 79737 ATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA 79796 ||||||||| | || | || |||||||| || | |||| ||||||||| | ||||| Sbjct 382 ATCCTTATACAACATATATGGTGTACCAGTCTCCACTTGAGCTTCTATAATTGACTTCCA 441 Query 79797 GACGACTCGAGC-----CTT-TATTATAGACTTGTATCTCTTTTCTCTTTCGTATTGTGT 79850 | || |||| ||| | ||||| || || |||||| ||| |||| | Sbjct 442 TAACTCTTGAGCTCTGACTTGTTTTATAAACC-GT-----TTTTCTTCTTCATATTTGGC 495 Query 79851 ATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACA 79910 ||||| | |||||| || ||||| || || | | || ||||| || | |||||| Sbjct 496 ATATAGTTCTTCGAATTCCTCTCCATAACAGTCAGCAAGGCCGGGACAATCATGAGGACA 555 Query 79911 CATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAG 79970 ||| | ||| ||| |||| | | ||| | ||||||||| ||||| || ||||| | Sbjct 556 CATGAGACTCCAATCTTCATCCTTTTCTACCCTTTTCATAAACAGATCTGGTATCCATAA 615 Query 79971 AGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 80030 ||| ||| || ||||| | || || || || ||||| |||||||| | ||| | Sbjct 616 AGCATAAAACAGTTCTCTAGCTCGCATTTCTTCCTTACCTGTGTTCTTTTTTAAATCTAA 675 Query 80031 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTT 80090 |||| | | || || | |||||| ||||| ||||| || || | | || || ||||| Sbjct 676 GAACTCAAATATGTCCGCATGCCAAGGTTCTAAGTAAATTGCAAATGCACCGGGACGTTT 735 Query 80091 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 80150 ||| || || ||||||| ||||| || || || || || |||||||||||||| | | Sbjct 736 GTTGCCACCTTGATCTACATATCTGGCAGTATTGTTGTACACTCTCAACATTGGCACTAG 795 Query 80151 ACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAAT 80210 |||||| || ||||| || || | ||||| || || | |||| | | Sbjct 796 ACCATTCGAAACCCCATTAGTGCCAGCTATATAAGACCCTTGAGCTCTAATACAATGTGT 855 Query 80211 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATA 80270 || |||||| || ||||| |||||| |||||||| ||| ||||||| |||||| | Sbjct 856 ATGTAAACCTATGCCACCTGCAGATTTAGAAATTAATGCACATTGTTTTAAAGTATCAAA 915 Query 80271 GATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 80330 || || || || ||||| || |||| | || || ||| || | || | || Sbjct 916 AATACCTTCAATACTATCGTCTTTCATAGCTATAAGGAAGCAGGAGGAAAGCTGTGGCCG 975 Query 80331 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAG 80390 || | || || || ||||| || || ||||| |||| || |||| | Sbjct 976 CGGTGTAGCTGCTGAGAACAATGTAGGGCTTGCATGTGTAAAATATTTCTCTGACATCAT 1035 Query 80391 ATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCAT 80450 ||| || || | || || || || || |||||| ||||| | ||| | ||| Sbjct 1036 ATTATAAGTATTGATTGCACTATCAATGTCTTCACCATGAATCCCTACGGAGACTCTCAT 1095 Query 80451 TAACATGTGCTGAGGTCTTTCAAC 80474 | |||||| |||||||||||||| Sbjct 1096 AAGCATGTGTTGAGGTCTTTCAAC 1119 >seq157294 Length=2047 Score = 239 bits (264), Expect = 6e-58 Identities = 790/1215 (65%), Gaps = 30/1215 (2%) Strand=Plus/Plus Query 78912 AATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTGTA---TTCTG 78968 ||||| |||| ||||| |||| | ||||| || | ||| | ||| || || || Sbjct 367 AATTTTCCAAGCTGTTTTGTAAAGTTTTTTAATGTCATTTGGTATATTTTTAATATTTTG 426 Query 78969 AATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTC 79028 ||| || || ||| | | || || ||| || || || | ||| || ||| | Sbjct 427 AATTGAACCTTCATATTCAATGATTAAATTTTTCATTTCATGTGACCACAAGTTTAATTT 486 Query 79029 GGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCG 79088 ||||| || | | | || ||| || | || |||||| |||| | ||||| Sbjct 487 AATTAAATCTTTCAACAAATATTCATTGACAATTTTAAATTCACCAGCATGTGTTCTCCT 546 Query 79089 AGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGT 79148 |||||||| || ||| | ||||| | |||||||||| || ||||| | || Sbjct 547 CGTGTAAATGTTGGAAGTAAAAGGTTCAAAACATTCATTATTATTAAATATTTGTGAGGT 606 Query 79149 TGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGATTTT 79208 || || |||||||| || | ||||||||||| |||| |||| | | ||||| Sbjct 607 ACTGGCGGTAGGCATAGGAGCAATTAATAAACTATTCCTAACGCCGTGATTTTTTATTTT 666 Query 79209 ATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGA--TCATAT 79266 | | | ||| |||||| | | | | || | | |||| | | ||| | Sbjct 667 AATTCTAAGATTTTCCCATTTTCCATG-TCTG--GAATTTTTTTTCCGCACAATTCAAAA 723 Query 79267 TGTAGAATACCGT--TACTAGCGTATGATCCTGTGTATGTTTCATAAGGTCC---TTCCT 79321 || | ||| || | || ||| | | | ||| |||| ||| || ||||| ||| Sbjct 724 TGAAAAATTCCTTGCTAATAG-GCA--AACCTTCATATGATTCGTATGGTCCAAATTC-- 778 Query 79322 TTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCT 79381 ||||| | |||||| || | || || || |||| || ||||| || || || Sbjct 779 TTTCGCC-AATTCAACGCTTTCTTCCAAGGCAGAAAAATACATCGTTTCAAATATTTTTG 837 Query 79382 TATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTG 79441 ||| | ||| ||||||| | || ||||| | ||| | | || ||| || |||| Sbjct 838 AATTTAAGTCTCTTGCTTCTTGACTGTCAAACGCATATCTCATAAGGCAAAATGCATCTG 897 Query 79442 CTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTG 79501 ||| ||| || | |||||| || |||||||| |||||| ||||| || | |||| Sbjct 898 CTAGTCCCTGTATACCAATTCCTATAGGTCTGTGTCTCATATTACTTCTTCTACATTCTT 957 Query 79502 GAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATTACTTTGACCA 79561 || ||||||| | | |||||||| | | || ||||| || |||||||| || | Sbjct 958 CAACAGGATAAAATGTTGTATCTATACATCTGTTAAGATTTCTTGTAATTACTTTAACTA 1017 Query 79562 CATCCTTTAGTTTGAGAAAATCAAATCGTCCATCTATTACAAACATGTTCAACGCGACAG 79621 | | | |||||| ||| |||||| | |||| || ||||| | ||| ||| Sbjct 1018 CTTGCGATAGTTTTTCAAAGTCAAATTTTTCATCAATGACAAATTTTGACAA----ACAA 1073 Query 79622 ATGC----CAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTG 79677 |||| || ||||||||| |||| ||||| || | ||||| || ||||| | Sbjct 1074 ATGCTCGCCAAATTACAAACTGCTATTTCATTTTTGTCAGAATATTCGATAATTTCCGCA 1133 Query 79678 CAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCA 79737 || || || | | || || || |||||||||||||||||||| ||||||| | Sbjct 1134 CAAAGATTTGAAGATTTTATTGTACCTAAATTTTGTTGATTACTTAGCCTGTTACAAGTG 1193 Query 79738 TCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAG 79797 || |||||||| || | || ||||| ||||| | || | ||||||||| |||||||| Sbjct 1194 TCTTTATAAAGCATATAAGGTGTACCCGTTTCTAATTGTGCTTCTATAATGGCTTTCCAT 1253 Query 79798 ACGACTCGAGCCTTTATTATAGACTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAAT 79857 | || ||| |||| | || || ||| | ||| | |||| |||| ||||||| Sbjct 1254 AACTTTCTAGCTTTTACAACAG--TTCTAT-TTTTTATTTTTTCATATTTGCAATATAAT 1310 Query 79858 CGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAAC 79917 | || || |||||||||||||| |||| || |||| ||||| | || Sbjct 1311 TTATTAAAATCTTCTCCCCAAACATCATCTAGACCTTTTGCCTCGTTTGGACAGAATAAA 1370 Query 79918 GACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA 79977 ||||||||| ||| | | |||||||| |||||| | ||| ||||| | |||||| Sbjct 1371 GACCACTCTTCATTTTTATCTACTCGTTCCATAAATAAGTCATTTATCCATAAAGCTATG 1430 Query 79978 AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCC 80037 || | ||||| | |||| || || | | ||||| ||| | | ||| | ||| | Sbjct 1431 AAAACGTCTCTAGCTCTAATGTCTTCACTGCTGGTATTTTTTCTTAAATCTAAGAAATCG 1490 Query 80038 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCT 80097 | ||| || ||||| ||||| || || || || | | | | || ||| |||| Sbjct 1491 AAAATGTCTTTGTGCCAAGGTTCTAAATAAATTGCGACACTACTTGATCTTTTACTTCCG 1550 Query 80098 CCCTGATCTATGTAT 80112 || |||| ||| ||| Sbjct 1551 CCTTGATTTATATAT 1565 >seq10486 Length=2602 Score = 226 bits (250), Expect = 4e-54 Identities = 469/687 (68%), Gaps = 17/687 (2%) Strand=Plus/Plus Query 78700 ATCTTATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAG 78759 || ||| | ||||| | || || ||||| | | | ||| ||||| || ||| ||| Sbjct 1921 ATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGTGTAAGTAG 1980 Query 78760 TACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAA 78819 |||||||| ||||||| ||| | |||| ||| |||||| || ||||||||| | Sbjct 1981 TACATTCCTGTTTTTAAACCCATCTTCCAAGCGTGGAAATGAATCGACGTTAGTTTCCCA 2040 Query 78820 TAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTG 78879 || | || | || | ||| || || | |||||||||||| || || || || || || Sbjct 2041 TAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAATGCCCCTCTA 2100 Query 78880 TCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCG 78938 || || ||||| | |||| || || ||| ||| ||||| | ||||| || || || Sbjct 2101 TCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTATAAATCT 2160 Query 78939 CTTAATATCTTCTGGAAGGTTTGTA--TTC-TGAATGGATCCACCATCTGCCATAATCCT 78995 ||| || |||| || | ||| | ||| || || |||||| | ||||| Sbjct 2161 CTT-ATTTCTTTAGGGATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAAG 2219 Query 78996 ATTCTTGATCTCTTCATTCCATAATTTTCTCTCG-GTTAAAACTCTAAGGAGATGCGGAT 79054 ||| || || ||||||| |||||| | || | || ||| | | || ||||| | | Sbjct 2220 ATTTTTCATATCTTCATCCCATAA-ATCAGCTAGAGTCAAATCAGTCAGAAGATGATGGT 2278 Query 79055 TAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTT 79114 | ||||| ||||||||||||| || ||||| | ||||||||| ||| |||||| Sbjct 2279 TCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAATGGTT 2338 Query 79115 CCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCA 79174 | | |||||| | || || | |||||| ||||| || || || ||||||||||| | || Sbjct 2339 CAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGTGCTATCA 2398 Query 79175 ATAAACTATTTCTAAGACCGTATGATCTG--ATTTTATCTTTTAGAGATTCCCAATCCCA 79232 ||| | ||| | | ||| ||| | || || || ||||| || |||| | ||| Sbjct 2399 ATAGAGAATTCCGCAAACC--ATGTTTTGCTATCTTTTCTTTGAGGACAGCCCAGTTCCA 2456 Query 79233 AAGATCAGACGGGACAACATT---CCAAAGATCATATTGTAGAATACCGTTACTAGCGTA 79289 ||| || | || | || ||| | |||||| || || ||||| | ||||| Sbjct 2457 AAGGTCTGTAGG---AGTTTTGACCCACATATCATACTGGAGGATACCTTGGCTAGCTGG 2513 Query 79290 TGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAA 79349 |||| ||||| || | ||||| ||||| |||||||||||||| || ||||| Sbjct 2514 ACTTCCTTGATATGTGCTGTATGCGCCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAA 2573 Query 79350 TGCTCCGTAATAAATGGTTTCGAAAAT 79376 ||| || |||||||| ||||| || || Sbjct 2574 TGCACCATAATAAATTGTTTCAAATAT 2600 >seq55316 Length=1040 Score = 100 bits (110), Expect = 4e-16 Identities = 79/95 (83%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 50446 TTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 50505 ||||||| ||||||||||| | |||||||| ||||| || || ||||||||||| | | Sbjct 466 TTAGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 407 Query 50506 CAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540 || ||||| |||||||||||||||| ||||| || Sbjct 406 CATATGTCTGGATATTGGATTGGGAATATAACGAA 372 Score = 93.3 bits (102), Expect = 6e-14 Identities = 131/184 (71%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 50229 ATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAA 50288 |||||| || || || | | ||||| || ||||||| ||||| || || || ||||| Sbjct 800 ATAAGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATTGCAATTTGAAA 741 Query 50289 TCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATT 50348 || ||||| || || || || || | || || ||| | || || || |||| || Sbjct 740 CCCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAGAAACGCTCCACTAAGTT 681 Query 50349 TTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTT 50408 ||||| || || || ||| || ||||| || || || |||||||| ||||||||||| Sbjct 680 CTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACATGTTTGATAAAATGTTT 621 Query 50409 TTCG 50412 ||| Sbjct 620 CTCG 617 >seq229742 Length=505 Score = 95.1 bits (104), Expect = 2e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 80689 TTTTTTGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCT 80748 || || || || || |||| ||| |||| ||||||||||| || |||||||||||||| Sbjct 250 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCA 309 Query 80749 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTT 80808 ||||| | ||| || ||| ||||| ||||| || || ||| | || | || | ||| Sbjct 310 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 369 Query 80809 GTTACTCCATTATATATTCC 80828 ||||| ||| |||||| || Sbjct 370 GTTACACCAGAATATATGCC 389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715820957886320