Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25]
272,638 sequences; 241,555,716 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq210326 123 2e-23
seq55316 91.5 1e-13
>seq210326
Length=301
Score = 123 bits (136), Expect = 2e-23
Identities = 110/136 (81%), Gaps = 4/136 (3%)
Strand=Plus/Plus
Query 13682 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 13739
||||||| ||| ||||||||| || ||||| |||||||| |||||||||||||||||
Sbjct 29 CCTCATCCCTAGAAATAAGTTCATTGCTGAAA--GTTAATCCGGGCATCAATCCTCGTTT 86
Query 13740 ttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 13799
||| ||||||||||||| ||| || || || || |||||| |||||||||| |||||
Sbjct 87 TTTCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTTCCTCAACTGCCGCAAA 146
Query 13800 CGCTATTAGTCGTTCT 13815
|| || | ||||||
Sbjct 147 AGCGATAATACGTTCT 162
>seq55316
Length=1040
Score = 91.5 bits (100), Expect = 1e-13
Identities = 165/240 (69%), Gaps = 6/240 (3%)
Strand=Plus/Minus
Query 13913 TCTCTTTAGTA---CTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTA 13969
||||||||| | ||| || || || ||||| | ||| ||||| || || || |
Sbjct 819 TCTCTTTAGGATCCCTT---ATATAAGTGTCAATTAATAAAGAGTACATCTCTGAATGAA 763
Query 13970 TGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCG 14029
||||| || || || ||||| ||||| || || || ||||| | | ||| |||||
Sbjct 762 CATTTTCCATTGCAATTTGAAACCCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTT 703
Query 14030 AGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCA 14089
| || | || | ||||| |||||||||||||||||| ||| ||||| ||||| |
Sbjct 702 GTGAGAAACGCTCCACTAAGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTA 643
Query 14090 ATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGCTAAATCCT 14149
| | | ||| ||||| | || ||| || || | | | | |||||| || || ||||
Sbjct 642 AGACATGTTTGATAAAATGTTTCTCGCAATCTTTTAATGTCTCCCAATCTGCCAAGTCCT 583
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476957781334320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |