Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25]
272,638 sequences; 241,555,716 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq38040 113 3e-20
seq49094 91.5 1e-13
>seq38040
Length=2861
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
||||| |||| | | ||||| |||| ||| || ||||| | ||||| |||||
Sbjct 2465 CCTCCTCGCAAACGCAGCACCAGGTGGAGGGTGGATTCTTTTTGAATGTTGTAGTCGGAA 2524
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| || || |||| |||||||| || || ||||||||||| || |||||||| | ||
Sbjct 2525 AGGGTGCGGCCGTCTTCCAATTGCTTTCCAGCAAAAATCAAACGTTGTTGATCTGGAGGA 2584
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| |||||||| || || | || || | ||| |||||| ||| || ||
Sbjct 2585 ATGCCTTCTTTGTCTTGAATTTTAGCCTTAACATTTTCAATTGTGTCAGAAGCTTCAACT 2644
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|||| ||| || |||||||| || || ||||| ||||||||||||||
Sbjct 2645 TCTAACGTAATTGTTTTTCCTGTAAGTGTTTTAACAAAAATTTGCAT 2691
Score = 89.7 bits (98), Expect = 4e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 42918 CTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAA 42977
||||||||| | ||||| || || || ||||| | || ||||| || |||||||||||
Sbjct 2044 CTCCTTTTGGATGTTGTAGTCAGATAAGGTACGCCCATCTTCCAACTGCTTGCCGGCAAA 2103
Query 42978 AATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCT 43037
|| | || |||||||| | || | ||| ||||| || ||| | || || |
Sbjct 2104 GATGAGACGTTGTTGATCTGGAGGAATACCCTCTTTATCTTGAATCTTAGCCTTTACGTT 2163
Query 43038 GCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCAC 43097
||| || || | ||| || |||| |||||||| ||||| ||||| || || ||
Sbjct 2164 TTCAATGGTATCAGATGGCTCCACCTCTAGAGTTATAGTCTTTCCTGTTAGTGTCTTGAC 2223
Query 43098 AAAAATTTGCAT 43109
||| ||||||||
Sbjct 2224 AAATATTTGCAT 2235
>seq49094
Length=1117
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 42897 TAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTC 42956
|| |||||| || | ||| ||||| || | ||| || || |||| ||| ||| | ||
Sbjct 213 TAGCACCAAGTGCAAAGTCGATTCCTTCTGAATATTATAGTCTGACAGTGTGCGTCCATC 154
Query 42957 GTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTC 43016
|||| ||| || ||||| ||||| |||| |||||||| | || | ||||| || ||
Sbjct 153 TTCCAGTTGCTTTCCGGCGAAAATTAATCTTTGTTGATCTGGAGGAATGCCTTCCTTGTC 94
Query 43017 GCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGT 43076
||| | || || | | | ||| || ||| || || || | || |||||
Sbjct 93 TTGAATCTTTGCCTTTACGTTCTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATAGT 34
Query 43077 TTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
||| ||||| || ||||| ||||||||||||||
Sbjct 33 TTTGCCGGTCAGTGTTTTAACAAAAATTTGCAT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380102394389004
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |