Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq59246 331 1e-85 seq157294 253 3e-62 seq10486 219 6e-52 seq55316 100 4e-16 seq229742 91.5 2e-13 >seq59246 Length=1357 Score = 331 bits (366), Expect = 1e-85 Identities = 594/863 (69%), Gaps = 6/863 (1%) Strand=Plus/Plus Query 71521 TCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCT 71580 ||||| | || ||||| |||||||||||||| | ||| ||| |||| ||| ||| ||| Sbjct 83 TCTGCCATACCCTGAACACCAATACCGATAGGACGGTGCCTCATATTTGAAGTTTTTGCT 142 Query 71581 TCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACTATTACTTTG 71640 || || | ||||||| | |||| ||| || | ||| || | |||| ||| | | | | Sbjct 143 TCAGGGACAGGATAAAAGTTAACATCAATGACTTTGTTTAAATTT-TGAGTCACAATCTT 201 Query 71641 ACCACATCCTTT-AGTTTGAGAAAATCAAATCTCCCATCTATTACAAACACGTTCAAGGC 71699 | | |||| | ||| ||||| |||| || | ||||||| ||| | || Sbjct 202 AGTGGTTTCTTTTAATTTTTTAAAATGAAATTGATTATTTTCAACAAACATGTTAAGTGC 261 Query 71700 AACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGT 71759 | || || || || || || || || ||||| | | ||||| | || ||||| Sbjct 262 TATGGAAGCAAGGTTGCACACTGCCACTTCATTTTCTGAAGTGTATTGCACAACCTCAGT 321 Query 71760 GCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGC 71819 ||||||||| ||||| || || || || | ||||| |||||||||||| |||| || || Sbjct 322 GCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTCCTGTTGCAAGC 381 Query 71820 ATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA 71879 ||||||||| | ||| | || |||||||| || | |||| ||||||||| | ||||| Sbjct 382 ATCCTTATACAACATATATGGTGTACCAGTCTCCACTTGAGCTTCTATAATTGACTTCCA 441 Query 71880 GACGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAA 71939 | || |||| | | | || | | | |||||| ||| |||| | ||||| Sbjct 442 TAACTCTTGAGCTCTGACTTGTTTTATAAACCGTTTTTCTTCTTCATATTTGGCATATAG 501 Query 71940 TCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAA 71999 | |||||| || ||||| || | | | || ||||| |||| |||||||| | Sbjct 502 TTCTTCGAATTCCTCTCCATAACAGTCAGCAAGGCCGGGACAATCATGAGGACACATGAG 561 Query 72000 TGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTAT 72059 ||| ||| |||| | | ||| | ||||||||| ||||| || ||||| | ||| Sbjct 562 ACTCCAATCTTCATCCTTTTCTACCCTTTTCATAAACAGATCTGGTATCCATAAAGCATA 621 Query 72060 AAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGC 72119 ||| || ||||| | || || || || ||||| |||||||| | ||| | |||| | Sbjct 622 AAACAGTTCTCTAGCTCGCATTTCTTCCTTACCTGTGTTCTTTTTTAAATCTAAGAACTC 681 Query 72120 CATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCC 72179 | || || | |||||| ||||| ||||| || || | | || || |||||||| || Sbjct 682 AAATATGTCCGCATGCCAAGGTTCTAAGTAAATTGCAAATGCACCGGGACGTTTGTTGCC 741 Query 72180 TCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATT 72239 || ||||||| ||||| || || || || || |||||||||||||| | | |||||| Sbjct 742 ACCTTGATCTACATATCTGGCAGTATTGTTGTACACTCTCAACATTGGCACTAGACCATT 801 Query 72240 GGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTGCTAATTGAT 72297 || | ||||| || || | ||||| || || | ||| | || || | Sbjct 802 CGAAACCCCATTAGTGCCAGCTATATAAGACCCTTGAGCTCTAATACAATGTGTAT--GT 859 Query 72298 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 72357 | |||||| || ||||| |||||| |||||||| ||| ||||||| |||||| | || Sbjct 860 AAACCTATGCCACCTGCAGATTTAGAAATTAATGCACATTGTTTTAAAGTATCAAAAATA 919 Query 72358 CCCTCTATACTATCATCCATCAT 72380 || || |||||||| || |||| Sbjct 920 CCTTCAATACTATCGTCTTTCAT 942 >seq157294 Length=2047 Score = 253 bits (280), Expect = 3e-62 Identities = 527/780 (68%), Gaps = 5/780 (1%) Strand=Plus/Plus Query 71377 CCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCT 71436 ||| |||||| ||||||||||| || || || | |||| || | || || || Sbjct 750 CCTTCATATGATTCGTATGGTCCAAATTCTTTCGCCAATTCAACGCTTTCTTCCAAGGCA 809 Query 71437 CCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAAT 71496 | |||| || ||||| || || || ||| | ||| |||||| | || ||||| Sbjct 810 GAAAAATACATCGTTTCAAATATTTTTGAATTTAAGTCTCTTGCTTCTTGACTGTCAAAC 869 Query 71497 GGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTG 71556 | ||| | | || ||| || ||||||| ||| || | ||||| || ||||||||| Sbjct 870 GCATATCTCATAAGGCAAAATGCATCTGCTAGTCCCTGTATACCAATTCCTATAGGTCTG 929 Query 71557 TGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTA 71616 |||||| ||||| || | |||| || ||||||| | | |||||||| | | Sbjct 930 TGTCTCATATTACTTCTTCTACATTCTTCAACAGGATAAAATGTTGTATCTATACATCTG 989 Query 71617 TTGAGATTTCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCTCCCA 71676 || |||||||| |||||||| || || | | |||||| ||| |||||| | || Sbjct 990 TTAAGATTTCTTGTAATTACTTTAACTACTTGCGATAGTTTTTCAAAGTCAAATTTTTCA 1049 Query 71677 TCTATTACAAACACGTTCAAGGCAACAGAT-GCCAGATTACAAACGGCTACCTCATTAGC 71735 || || ||||| ||| ||| | | |||| ||||||||| |||| ||||| Sbjct 1050 TCAATGACAAATTTTGACAAA-CAAATGCTCGCCAAATTACAAACTGCTATTTCATTTTT 1108 Query 71736 ATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTG 71795 || | ||||| |||||||| | |||||||| | | || || || ||||||||||| Sbjct 1109 GTCAGAATATTCGATAATTTCCGCACAAAGATTTGAAGATTTTATTGTACCTAAATTTTG 1168 Query 71796 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAAT 71855 ||||||||| ||||||| | || |||||||| ||| | || ||||| ||||| | Sbjct 1169 TTGATTACTTAGCCTGTTACAAGTGTCTTTATAAAGCATATAAGGTGTACCCGTTTCTAA 1228 Query 71856 CTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCTT 71915 || | ||||||||| |||||||| | || ||| |||| | | || ||| | || Sbjct 1229 TTGTGCTTCTATAATGGCTTTCCATAACTTTCTAGCTTTTACAACA--GTTCTAT-TTTT 1285 Query 71916 TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCC 71975 | | |||| |||| ||||||| | || || ||||||||| ||| |||| || Sbjct 1286 TATTTTTTCATATTTGCAATATAATTTATTAAAATCTTCTCCCCAAACATCATCTAGACC 1345 Query 71976 AGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAA 72035 || || ||||| | || ||||||||| ||| | || |||||||| |||||| Sbjct 1346 TTTTGCCTCGTTTGGACAGAATAAAGACCACTCTTCATTTTTATCTACTCGTTCCATAAA 1405 Query 72036 GAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGT 72095 | ||| ||||| | |||||| || | ||||| | |||| || || | | || Sbjct 1406 TAAGTCATTTATCCATAAAGCTATGAAAACGTCTCTAGCTCTAATGTCTTCACTGCTGGT 1465 Query 72096 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 72155 ||| ||| | | ||| | ||| | | ||| || ||||| ||||| || || || || Sbjct 1466 ATTTTTTCTTAAATCTAAGAAATCGAAAATGTCTTTGTGCCAAGGTTCTAAATAAATTGC 1525 >seq10486 Length=2602 Score = 219 bits (242), Expect = 6e-52 Identities = 460/683 (67%), Gaps = 9/683 (1%) Strand=Plus/Plus Query 70783 ATTTTTTCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAG 70842 ||||| | ||||| | ||||||||||| | | | ||| | ||| || ||| ||| Sbjct 1921 ATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGTGTAAGTAG 1980 Query 70843 TACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAA 70902 ||||| |||||||||| ||| | |||| ||| ||||| || ||||||||| | Sbjct 1981 TACATTCCTGTTTTTAAACCCATCTTCCAAGCGTGGAAATGAATCGACGTTAGTTTCCCA 2040 Query 70903 TAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTG 70962 ||| |||| | || | || || || | || |||||||| || || || || || || Sbjct 2041 TAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAATGCCCCTCTA 2100 Query 70963 TCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCG 71021 || || ||||| | |||| || || ||| ||| ||||| | ||||| || || || Sbjct 2101 TCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTATAAATCT 2160 Query 71022 CTTAATATCTTCTGGAAGGTTTGTA--TTCT-GAATGGATCCACCATCTGCA-ATAATCC 71077 |||| | |||| || | ||| | |||| | || |||||| | || | ||||| Sbjct 2161 CTTATT-TCTTTAGGGATTTTTTCAATTTCTTGTATAGATCCATTGT-TGTATATAATAA 2218 Query 71078 TATTTTTGATCTCTTCATTCCATAATTTTCTCTCG-GTTAAAACTCTAAGGAGATGAGGA 71136 |||||| || ||||||| |||||| | || | || ||| | | || |||||| | Sbjct 2219 GATTTTTCATATCTTCATCCCATAAATCAG-CTAGAGTCAAATCAGTCAGAAGATGATGG 2277 Query 71137 TTAACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGT 71196 || ||||| ||||||||||||| || ||||| | ||||||||| ||| | ||| Sbjct 2278 TTCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAATGGT 2337 Query 71197 TCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACC 71256 || | || ||| | || || | |||||| ||||| || ||||||||||||||||| | | Sbjct 2338 TCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGTGCTATC 2397 Query 71257 AATAGACTATTTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAA 71316 |||||| ||| | | ||||||| | || || ||||| || |||| |||||| Sbjct 2398 AATAGAGAATTCCGCAAACCATGTTTTGCTATCTTTTCTTTGAGGACAGCCCAGTTCCAA 2457 Query 71317 AGATCCGATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGAT 71376 || || | || || || | ||||| | Sbjct 2458 AGGTCTGTAGGAGTTTTGACCCACATATCATACTGGAGGATACCTTGGCTAGCTGGACTT 2517 Query 71377 CCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCT 71436 ||| |||||| ||||| ||||||||||| |||| ||||||||| || |||||||| Sbjct 2518 CCTTGATATGTGCTGTATGCGCCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATGCA 2577 Query 71437 CCATAATAAATGGTTTCGAAAAT 71459 ||||||||||| ||||| || || Sbjct 2578 CCATAATAAATTGTTTCAAATAT 2600 >seq55316 Length=1040 Score = 100 bits (110), Expect = 4e-16 Identities = 79/95 (83%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 42551 TTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTC 42610 ||||||| |||||||||||| | |||||||| |||||||| || ||||||||||| | | Sbjct 466 TTAGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 407 Query 42611 CAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 || || || ||||||| |||||||| ||||| || Sbjct 406 CATATGTCTGGATATTGGATTGGGAATATAACGAA 372 >seq229742 Length=505 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 72772 ttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCT 72831 || || || || || |||| ||| |||| ||||||||||| || | |||||||||||| Sbjct 250 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCA 309 Query 72832 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTT 72891 ||||| | ||| || ||| ||||| ||||| || || ||| | || | || | ||| Sbjct 310 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 369 Query 72892 GTTACTCCATTATATATTCC 72911 ||||| ||| |||||| || Sbjct 370 GTTACACCAGAATATATGCC 389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 668851974384880