Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq93941 122 1e-22 seq59246 87.8 3e-12 seq249461 86.0 9e-12 >seq93941 Length=976 Score = 122 bits (134), Expect = 1e-22 Identities = 158/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 70192 CAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAAT 70251 |||||||| ||||| || || || | ||| |||||||||| | ||||| | |||| Sbjct 248 CAATCCAAGTGATAGAAGAATGTTAGTATGCGCATGGAATCCCTCTGATTTAAGCAAAAT 189 Query 70252 GGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTA-CGA-TGGCAAATTGTCA 70309 |||||| || |||||||||||||| || ||| || | ||| | | ||| || | || Sbjct 188 GGCACTTCCTCCGTGTCACTGTTTAGCACAG--TTCCATGTATCTAGTGGAAAGCTTTCT 131 Query 70310 TGCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGC 70369 || | ||||| || || || || || ||||| || ||||| || || ||||| || || Sbjct 130 TGTCTGATGTACCAAAGAAGCGCAGATATGGGTCTAGGTGTGCCTTTCAACATAGCTAGT 71 Query 70370 TATTCTATGTTGACGCACATGATTGCTCACATTAC 70404 ||| || | ||||| || ||||||||||| || || Sbjct 70 TATGCTCTATTGACACATATGATTGCTCATATAAC 36 >seq59246 Length=1357 Score = 87.8 bits (96), Expect = 3e-12 Identities = 149/213 (70%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 96824 TGGCCTAGTGCCAATGCTCAGAATGTACAATGCAAT---GTCACGATACGTTACACAGGG 96880 ||| |||||||||||| | ||| ||||||| |||| | || |||| || || || Sbjct 799 TGGTCTAGTGCCAATGTTGAGAGTGTACAA--CAATACTGCCA-GATATGTAGATCAAGG 743 Query 96881 CGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTT 96940 ||||| ||||| || || || | || | ||||| ||||||||||| |||||| | || Sbjct 742 TGGCAACAAACGTCCCGGTGCATTTGCAATTTACTTAGAACCTTGGCATGCGGACATATT 683 Query 96941 TGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTT 97000 ||| || | || | || ||| | || ||||| ||||| || || |||| Sbjct 682 TGAGTTCTTAGATTTAAAAAAGAACACAGGTAAGGAAGAAATGCGAGCTAGAGAACTGTT 623 Query 97001 TTATGCACTCTGGGTGCCAGATTTGTTCATGAA 97033 |||||| | ||| | |||||| |||| ||||| Sbjct 622 TTATGCTTTATGGATACCAGATCTGTTTATGAA 590 >seq249461 Length=318 Score = 86.0 bits (94), Expect = 9e-12 Identities = 131/187 (70%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 50134 CTGGCCCGTAGAGTATATAATCTACACGGCATCCTTTCCGAGTGCACTCACCGGAGCCGA 50193 |||||| ||||| || ||||| || || || | || || ||||| | || || | || Sbjct 212 CTGGCCTGTAGAATACATAATATATACCGCGGCGTTCCCCAGTGCCTTAACGGGTTCTGA 153 Query 50194 TTTGACCATATTCGCAGCGTGCTTTGCCTACATTGCCGATGTGTCGACTGTGGAGAATCG 50253 | | |||||||| | || || |||||||| |||||||||||| | | || ||| Sbjct 152 CCTCGCGATATTCGCTGGTTGTTTCGCCTACATAGCCGATGTGTCGTCCTTAAAGTCTCG 93 Query 50254 CACGCTACGAGTGGGCATCTTGGATGCCGTCTACCTGAGCACGATGCCAACCGGTGTGGC 50313 || || |||| || || || |||| || || | || |||||||| || || ||||| Sbjct 92 GACTTTAAGAGTCGGTATATTAGATGTTGTGTATTTAAGTACGATGCCTACTGGGGTGGC 33 Query 50314 GATCGGT 50320 || ||| Sbjct 32 TATTGGT 26 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 738533688772880