Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25]
272,638 sequences; 241,555,716 total letters
Query= NC_004348.1
Length=40679
Score E
Sequences producing significant alignments: (Bits) Value
seq271029 461 2e-125
seq249728 219 1e-52
seq177630 156 1e-33
seq262377 125 2e-24
>seq271029
Length=527
Score = 461 bits (510), Expect = 2e-125
Identities = 427/544 (78%), Gaps = 20/544 (4%)
Strand=Plus/Plus
Query 25002 TCTCAATTCTGACGTTTACCCCGCTGATGGGGATGTCTGACGTTGTTACCAAGTTCCTGA 25061
|||| | ||||| || |||||| | ||||| ||||| ||||| || || |||||| | |
Sbjct 1 TCTCTTTGCTGACCTTCACCCCGTTAATGGGTATGTCAGACGTCGTAACGAAGTTCATAA 60
Query 25062 AGAATCCCAGTAAGTCGCAGAAAGTGGTCAACATGACCATCTATGATGCTGAGCACTACA 25121
|||| || || ||| |||||| |||||||| |||||||||||||| || || |||||||
Sbjct 61 AGAACCCTAGCAAGATGCAGAAGGTGGTCAATATGACCATCTATGACGCCGACCACTACA 120
Query 25122 CCGACGAGCAGAAAGAGCAAATCATAGCATCCTATCCTGAGCATGAGAGAGAAGCACGTG 25181
||||||||||||||||||||||||| || || ||||||||||||||| | ||||| ||||
Sbjct 121 CCGACGAGCAGAAAGAGCAAATCATTGCCTCTTATCCTGAGCATGAGCGTGAAGCGCGTG 180
Query 25182 CTCGTGGTATTCCTACGATGGGTAGCGGTCGAATATTCCAGATACCGGAAGAGACGATTA 25241
| || ||||| || || |||||||||||| | || | ||| ||||| ||||| || || |
Sbjct 181 CGCGGGGTATACCGACAATGGGTAGCGGTAGGATTTACCAAATACCTGAAGAAACTATCA 240
Query 25242 AGTGCCAGCCGTTTGAGTGTCCCGATCACTTCTATGTTATCGACGCTCAGGACTTCGGAT 25301
|||||||||||||||| ||||||||||||||||| |||||||||| || ||||| || |
Sbjct 241 AGTGCCAGCCGTTTGAATGTCCCGATCACTTCTACGTTATCGACGGGCAAGACTTTGGCT 300
Query 25302 GGAACCACCCGCAAGCTCACATTCAGCTTTGGTGGGACAAAGACGCAGATGTTTTCTATC 25361
|||| ||||||||| |||| |||| ||||| || |||||||
Sbjct 301 GGAATCACCCGCAA--TCAC------------NNGGACGAAGAC------GTCTTCTATC 340
Query 25362 TGGCGCGTGTGTGGAAGAAATCAGAGAACACCGCAGTTCAGGCATGGGGTGCTGTTAAGT 25421
| || || |||||||||||||| |||||||| || || ||||| ||||| ||| |||||
Sbjct 341 TTGCTCGAGTGTGGAAGAAATCTGAGAACACTGCTGTGCAGGCTTGGGGGGCTACTAAGT 400
Query 25422 CGTGGGCTAACAAAATACCTGTCGCGTGGCCTCATGACGGTCACCAACACGAAAAGGGCG 25481
| ||| | ||||| |||||||| || |||||||| || || ||||||||||| || ||||
Sbjct 401 CATGGTCCAACAAGATACCTGTGGCTTGGCCTCACGATGGACACCAACACGAGAAAGGCG 460
Query 25482 GTGGTGAGCAACTTAAAACCCAATATGCGGACGCCGGGTTCTCTATGCTTCCCGAACACG 25541
| |||||||| || || | ||||| || ||||| || ||| ||| | || || || |
Sbjct 461 GCGGTGAGCAGCTGAAGAAACAATACGCCGACGCTGGCTTCATGATGTTACCGGAGCATG 520
Query 25542 CAAC 25545
| ||
Sbjct 521 CCAC 524
>seq249728
Length=458
Score = 219 bits (242), Expect = 1e-52
Identities = 328/464 (71%), Gaps = 25/464 (5%)
Strand=Plus/Minus
Query 26371 CAGAATGGTTGGGAGGATTTCGCAGAAAAATACGACCTCGATGCTGATGATATTCCATCA 26430
||| ||||||||||| ||||| ||| |||| | ||||| | || || | ||
Sbjct 441 CAGGATGGTTGGGAGTCATTCGCTGAAGAATATGGACTCGACCCAGACGAAAAGCCTAGC 382
Query 26431 TTCCAGAACCCCAACGATTGGGTATTTCCATGGCTGACGCAGGA-CACAATTCAGATCGC 26489
|| || ||||||||||||||||| || |||||||| ||| | | | | | |||||
Sbjct 381 TTTCAATCTCCCAACGATTGGGTATTCCCTTGGCTGAC-CAGTAACTCGCTGTATATCGC 323
Query 26490 TGAGTTTTACGAAGTGGTCGAGAAGAAAGAGACGGCGTTTATCTACCAAGACCCGGTTAC 26549
||||| ||||||||| | |||||||||||| || | |||||| | |||||| | ||
Sbjct 322 TGAGTATTACGAAGTCGAAGAGAAGAAAGAGGTCGCTTACATCTACGAGGACCCGCTAAC 263
Query 26550 GGGTGAGCCGGTAAGCTACTTTAAGCGCGATATTAAAGACGTCATCGACGACCTGGCTGA 26609
|||||||| || |||||||| |||||| || | |||||
Sbjct 262 CGGTGAGCCAGTTAGCTACTTCAAGCGCATGCTT------------GCCGACC------- 222
Query 26610 TAGTGGATTTATCAAAATTGCAGAGCGCCAGATTAAGCGTCGCCGGGTATACAAATCGAT 26669
|||| | | || |||| ||| ||||||| || ||| |||| || ||| ||||
Sbjct 221 --GTGGCATGAAGAAGATTGGCGAGAAGAAGATTAAACGCCGCAGGGTGTATAAAACGAT 164
Query 26670 TATCACCTGCACCGCTGTACTCAAAGACAAGCAGCTC-ATTGCTGGCGAGCATATCCCAA 26728
| |||| | |||| ||| | |||||| ||| | || || || |||||| | || |
Sbjct 163 TCTCACATCTTCCGCAGTATTGAAAGACC-GCACATTGATAGCCGGTGAGCATCTGCCGA 105
Query 26729 TTGTTCCGGTATTCGGAGAGTGGGGCTTCGTTGAAGATAAAGAGGTGTATGAGGGCGTCG 26788
|||| || || ||||| |||||||| ||||| || |||||||| || |||||||| |||
Sbjct 104 TTGTGCCAGTGTTCGGCGAGTGGGGATTCGTCGAGGATAAAGAAGTCTATGAGGGTATCG 45
Query 26789 TCCGCCTGACAAAAGACGGTCAGCGTCTACGCAACATGATTATG 26832
| | ||||| |||||||| ||||| || |||||||||||||||
Sbjct 44 TTAGGCTGACGAAAGACGGCCAGCGACTGCGCAACATGATTATG 1
>seq177630
Length=801
Score = 156 bits (172), Expect = 1e-33
Identities = 252/367 (69%), Gaps = 18/367 (5%)
Strand=Plus/Plus
Query 29896 CCTGAGCAACGCGCCTACGCCAACGTTAACACCTCACTGGCTGATGCAATGGCGGTGAAC 29955
|| ||| ||||| | || |||||||| ||||| | || |||||| | ||| | |||
Sbjct 1 CCAGAGTAACGCACTTATGCCAACGTGAACACTACGCTTGCTGATAAGACGGCAATCAAC 60
Query 29956 ATCCTGAACGTT--AAGGATGCCCGTACTAACGTGTTCTGGGCTGATGACGCCATCCGTA 30013
||| ||||||| || | || |||||||| |||||||| ||||| | |||||||
Sbjct 61 ATCTTGAACGTGGCAACG--GCTAAAACTAACGTTTTCTGGGCAGATGATTCTATCCGTA 118
Query 30014 TTGTGTCTCAGCCGATTCCTGCTAACCACGAATTGTTTGCAGGTATGAAAACTACCTCAT 30073
| ||||||||||| ||||| || ||| || ||||||| || |||||||| || ||
Sbjct 119 TCGTGTCTCAGCCTATTCCGGCCAACAGTGACCTGTTTGCCGGGATGAAAACGACTTCGN 178
Query 30074 TCAGCATCCCGGATGTCGGCCTTAACGGTATCTTCGCTACGCAGGGTGATATTTCCACCC 30133
|| | || || ||||| || || | |||
Sbjct 179 NNNNNNNNNNNNNNNNNNN-----------TCATGGCGACTCAGGGCGACATCGCAACCT 227
Query 30134 TGTCCGGCCTGTGCCGTATTGCGCTGTGGTACGGCGTAAACGCGACACGACCGGAAGCAA 30193
|| |||| ||||||||||| |||||||| ||||| ||||| || || || |||||||
Sbjct 228 TGACCGGTAAATGCCGTATTGCTCTGTGGTATGGCGTCAACGCAACCCGCCCTGAAGCAA 287
Query 30194 TCGGTGTTGGTCTGCCTGGTCAGACTGCGTAACTAACAGGGGCTTCGGCCCCTTTCTTAT 30253
|||| || || || ||||||| || || ||| | | |||||||||||||||| || |
Sbjct 288 TCGGCGTGGGCCTCGCTGGTCAAACCGCTTAA-TCAATGGGGCTTCGGCCCCTT--TTCT 344
Query 30254 TTGAGGT 30260
|||||||
Sbjct 345 TTGAGGT 351
Score = 140 bits (154), Expect = 8e-29
Identities = 206/289 (71%), Gaps = 2/289 (1%)
Strand=Plus/Plus
Query 30789 CAAAGCCTAAGGCGGAAAGCGATGCAGATAAAGACTAAAGGCGATCTGGCCAGGGCGGCG 30848
||||||| |||| || | |||||| || |||| || || || | | | |||||
Sbjct 508 CAAAGCC-AAGGTGGTGACCGATGCTGACTCAGACGAAGGGTGACATTGTTCGTGCGGCA 566
Query 30849 CTGCGTAAGCTTGGTGTAGCATCAGATGCAACTCTCACTGATATCGAACCTCAGTCTATG 30908
||||| ||||| ||| | || || || || || || |||||| |||| || || || |||
Sbjct 567 CTGCGCAAGCTAGGTATCGCCTCTGACGCCACGCTAACTGATGTCGAGCCACAATCAATG 626
Query 30909 CAGGATGCTGTTGACGACCTTGAAGCGATGATGGCTGAGTGGTATCAGGACGGAAAGGGA 30968
|||| | ||| ||||||| ||| |||||||||||| |||||||||||||| ||
Sbjct 627 GAGGACGGCGTTAACGACCTCGAAATGATGATGGCTGAATGGTATCAGGACGGTCGAGGG 686
Query 30969 ATCATCACCGGATATATATTCTCAGATGATGATAATCCTCCCGCTGAAGGTGATGATCAC 31028
|| ||||| || || || | |||| || ||||||| || |||||||| || |||
Sbjct 687 ATTATCACTGGCTACGCTTTTGCTAATGACGACGATCCTCCGGCAGAAGGTGACGACCAC 746
Query 31029 GGTCTTCGCTCAAGCGCAGTCAGCGCAGTATTCCACAATCTGGC-CTGC 31076
| || || ||| | | ||||||||| |||| || || || ||||
Sbjct 747 TCGATGCGGTCTAGCTCGATTAGCGCAGTAGTCCATAACCTCGCACTGC 795
>seq262377
Length=537
Score = 125 bits (138), Expect = 2e-24
Identities = 229/329 (70%), Gaps = 6/329 (2%)
Strand=Plus/Plus
Query 32146 ATGGAGGCGTTGAGGTTCGATTCGCATGAACTGCTGATTATCCATCTCCCGCGTCATGTG 32205
|||||| | || | |||||| || || || | || ||||| || ||| | ||||
Sbjct 210 ATGGAGTCCTTACGATTCGATGGTCACGAGCTAATCATCATCCACCTACCGAATGATGTA 269
Query 32206 CTGGTTTACGATGCCTCATCAAGCCAGAACGGGCCGCAATGGTGCGTACTGAAAACCGGT 32265
|| || || |||||| |||| |||||||| |||||||||| | |||||||| ||
Sbjct 270 CTTTGCTATGACGCCTCAGCAAGTCAGAACGGTCCGCAATGGTCAATCCTGAAAACTGGA 329
Query 32266 TTATACGACGATGTTTATCGCGCCATCGATTTCATGTACGAAGGCAACCAGATTACGTGT 32325
| || || | |||| || ||||| |||||||| || || ||||||||||| ||
Sbjct 330 CTCTATGATACTCCGCATCGTGCTATCGACTTCATGTATGAGGGTAACCAGATTACCTGC 389
Query 32326 GGCGACAAGTCAGAAGCGGTGACAGGGCAGTTGCAATTCGACATTAGTAGT--CAGTACG 32383
|| |||||| | || | ||||| ||| | | |||| | | | | | |||||||
Sbjct 390 GGAGACAAGACGCAATCTGTGACCGGGTA-TCTTAATTATGC-TCACTCATCACAGTACG 447
Query 32384 ACAAGCAGCAAGAACATCTGCTGTTTACTCCCATCTTCAAGGCTGATAAC-GCCAGATGC 32442
|| |||||||||| || || | || || | ||||||||||||||| || |||
Sbjct 448 ACGCAGAGCAAGAACACCTTCTCTACACGCCACTTTTCAAGGCTGATAACAACCTGAT-A 506
Query 32443 TTCGATCTGGAAGTTGAATCCTCGACAGG 32471
|||||| | ||| | ||| | || |||||
Sbjct 507 TTCGATTTCGAATTAGAAGCATCAACAGG 535
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 129630149323596
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |