Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Laparus_20doris_20doris_20[genbank_20GCA_5F900068335.1_202017-04-25] 272,638 sequences; 241,555,716 total letters Query= NC_004348.1 Length=40679 Score E Sequences producing significant alignments: (Bits) Value seq271029 461 2e-125 seq249728 219 1e-52 seq177630 156 1e-33 seq262377 125 2e-24 >seq271029 Length=527 Score = 461 bits (510), Expect = 2e-125 Identities = 427/544 (78%), Gaps = 20/544 (4%) Strand=Plus/Plus Query 25002 TCTCAATTCTGACGTTTACCCCGCTGATGGGGATGTCTGACGTTGTTACCAAGTTCCTGA 25061 |||| | ||||| || |||||| | ||||| ||||| ||||| || || |||||| | | Sbjct 1 TCTCTTTGCTGACCTTCACCCCGTTAATGGGTATGTCAGACGTCGTAACGAAGTTCATAA 60 Query 25062 AGAATCCCAGTAAGTCGCAGAAAGTGGTCAACATGACCATCTATGATGCTGAGCACTACA 25121 |||| || || ||| |||||| |||||||| |||||||||||||| || || ||||||| Sbjct 61 AGAACCCTAGCAAGATGCAGAAGGTGGTCAATATGACCATCTATGACGCCGACCACTACA 120 Query 25122 CCGACGAGCAGAAAGAGCAAATCATAGCATCCTATCCTGAGCATGAGAGAGAAGCACGTG 25181 ||||||||||||||||||||||||| || || ||||||||||||||| | ||||| |||| Sbjct 121 CCGACGAGCAGAAAGAGCAAATCATTGCCTCTTATCCTGAGCATGAGCGTGAAGCGCGTG 180 Query 25182 CTCGTGGTATTCCTACGATGGGTAGCGGTCGAATATTCCAGATACCGGAAGAGACGATTA 25241 | || ||||| || || |||||||||||| | || | ||| ||||| ||||| || || | Sbjct 181 CGCGGGGTATACCGACAATGGGTAGCGGTAGGATTTACCAAATACCTGAAGAAACTATCA 240 Query 25242 AGTGCCAGCCGTTTGAGTGTCCCGATCACTTCTATGTTATCGACGCTCAGGACTTCGGAT 25301 |||||||||||||||| ||||||||||||||||| |||||||||| || ||||| || | Sbjct 241 AGTGCCAGCCGTTTGAATGTCCCGATCACTTCTACGTTATCGACGGGCAAGACTTTGGCT 300 Query 25302 GGAACCACCCGCAAGCTCACATTCAGCTTTGGTGGGACAAAGACGCAGATGTTTTCTATC 25361 |||| ||||||||| |||| |||| ||||| || ||||||| Sbjct 301 GGAATCACCCGCAA--TCAC------------NNGGACGAAGAC------GTCTTCTATC 340 Query 25362 TGGCGCGTGTGTGGAAGAAATCAGAGAACACCGCAGTTCAGGCATGGGGTGCTGTTAAGT 25421 | || || |||||||||||||| |||||||| || || ||||| ||||| ||| ||||| Sbjct 341 TTGCTCGAGTGTGGAAGAAATCTGAGAACACTGCTGTGCAGGCTTGGGGGGCTACTAAGT 400 Query 25422 CGTGGGCTAACAAAATACCTGTCGCGTGGCCTCATGACGGTCACCAACACGAAAAGGGCG 25481 | ||| | ||||| |||||||| || |||||||| || || ||||||||||| || |||| Sbjct 401 CATGGTCCAACAAGATACCTGTGGCTTGGCCTCACGATGGACACCAACACGAGAAAGGCG 460 Query 25482 GTGGTGAGCAACTTAAAACCCAATATGCGGACGCCGGGTTCTCTATGCTTCCCGAACACG 25541 | |||||||| || || | ||||| || ||||| || ||| ||| | || || || | Sbjct 461 GCGGTGAGCAGCTGAAGAAACAATACGCCGACGCTGGCTTCATGATGTTACCGGAGCATG 520 Query 25542 CAAC 25545 | || Sbjct 521 CCAC 524 >seq249728 Length=458 Score = 219 bits (242), Expect = 1e-52 Identities = 328/464 (71%), Gaps = 25/464 (5%) Strand=Plus/Minus Query 26371 CAGAATGGTTGGGAGGATTTCGCAGAAAAATACGACCTCGATGCTGATGATATTCCATCA 26430 ||| ||||||||||| ||||| ||| |||| | ||||| | || || | || Sbjct 441 CAGGATGGTTGGGAGTCATTCGCTGAAGAATATGGACTCGACCCAGACGAAAAGCCTAGC 382 Query 26431 TTCCAGAACCCCAACGATTGGGTATTTCCATGGCTGACGCAGGA-CACAATTCAGATCGC 26489 || || ||||||||||||||||| || |||||||| ||| | | | | | ||||| Sbjct 381 TTTCAATCTCCCAACGATTGGGTATTCCCTTGGCTGAC-CAGTAACTCGCTGTATATCGC 323 Query 26490 TGAGTTTTACGAAGTGGTCGAGAAGAAAGAGACGGCGTTTATCTACCAAGACCCGGTTAC 26549 ||||| ||||||||| | |||||||||||| || | |||||| | |||||| | || Sbjct 322 TGAGTATTACGAAGTCGAAGAGAAGAAAGAGGTCGCTTACATCTACGAGGACCCGCTAAC 263 Query 26550 GGGTGAGCCGGTAAGCTACTTTAAGCGCGATATTAAAGACGTCATCGACGACCTGGCTGA 26609 |||||||| || |||||||| |||||| || | ||||| Sbjct 262 CGGTGAGCCAGTTAGCTACTTCAAGCGCATGCTT------------GCCGACC------- 222 Query 26610 TAGTGGATTTATCAAAATTGCAGAGCGCCAGATTAAGCGTCGCCGGGTATACAAATCGAT 26669 |||| | | || |||| ||| ||||||| || ||| |||| || ||| |||| Sbjct 221 --GTGGCATGAAGAAGATTGGCGAGAAGAAGATTAAACGCCGCAGGGTGTATAAAACGAT 164 Query 26670 TATCACCTGCACCGCTGTACTCAAAGACAAGCAGCTC-ATTGCTGGCGAGCATATCCCAA 26728 | |||| | |||| ||| | |||||| ||| | || || || |||||| | || | Sbjct 163 TCTCACATCTTCCGCAGTATTGAAAGACC-GCACATTGATAGCCGGTGAGCATCTGCCGA 105 Query 26729 TTGTTCCGGTATTCGGAGAGTGGGGCTTCGTTGAAGATAAAGAGGTGTATGAGGGCGTCG 26788 |||| || || ||||| |||||||| ||||| || |||||||| || |||||||| ||| Sbjct 104 TTGTGCCAGTGTTCGGCGAGTGGGGATTCGTCGAGGATAAAGAAGTCTATGAGGGTATCG 45 Query 26789 TCCGCCTGACAAAAGACGGTCAGCGTCTACGCAACATGATTATG 26832 | | ||||| |||||||| ||||| || ||||||||||||||| Sbjct 44 TTAGGCTGACGAAAGACGGCCAGCGACTGCGCAACATGATTATG 1 >seq177630 Length=801 Score = 156 bits (172), Expect = 1e-33 Identities = 252/367 (69%), Gaps = 18/367 (5%) Strand=Plus/Plus Query 29896 CCTGAGCAACGCGCCTACGCCAACGTTAACACCTCACTGGCTGATGCAATGGCGGTGAAC 29955 || ||| ||||| | || |||||||| ||||| | || |||||| | ||| | ||| Sbjct 1 CCAGAGTAACGCACTTATGCCAACGTGAACACTACGCTTGCTGATAAGACGGCAATCAAC 60 Query 29956 ATCCTGAACGTT--AAGGATGCCCGTACTAACGTGTTCTGGGCTGATGACGCCATCCGTA 30013 ||| ||||||| || | || |||||||| |||||||| ||||| | ||||||| Sbjct 61 ATCTTGAACGTGGCAACG--GCTAAAACTAACGTTTTCTGGGCAGATGATTCTATCCGTA 118 Query 30014 TTGTGTCTCAGCCGATTCCTGCTAACCACGAATTGTTTGCAGGTATGAAAACTACCTCAT 30073 | ||||||||||| ||||| || ||| || ||||||| || |||||||| || || Sbjct 119 TCGTGTCTCAGCCTATTCCGGCCAACAGTGACCTGTTTGCCGGGATGAAAACGACTTCGN 178 Query 30074 TCAGCATCCCGGATGTCGGCCTTAACGGTATCTTCGCTACGCAGGGTGATATTTCCACCC 30133 || | || || ||||| || || | ||| Sbjct 179 NNNNNNNNNNNNNNNNNNN-----------TCATGGCGACTCAGGGCGACATCGCAACCT 227 Query 30134 TGTCCGGCCTGTGCCGTATTGCGCTGTGGTACGGCGTAAACGCGACACGACCGGAAGCAA 30193 || |||| ||||||||||| |||||||| ||||| ||||| || || || ||||||| Sbjct 228 TGACCGGTAAATGCCGTATTGCTCTGTGGTATGGCGTCAACGCAACCCGCCCTGAAGCAA 287 Query 30194 TCGGTGTTGGTCTGCCTGGTCAGACTGCGTAACTAACAGGGGCTTCGGCCCCTTTCTTAT 30253 |||| || || || ||||||| || || ||| | | |||||||||||||||| || | Sbjct 288 TCGGCGTGGGCCTCGCTGGTCAAACCGCTTAA-TCAATGGGGCTTCGGCCCCTT--TTCT 344 Query 30254 TTGAGGT 30260 ||||||| Sbjct 345 TTGAGGT 351 Score = 140 bits (154), Expect = 8e-29 Identities = 206/289 (71%), Gaps = 2/289 (1%) Strand=Plus/Plus Query 30789 CAAAGCCTAAGGCGGAAAGCGATGCAGATAAAGACTAAAGGCGATCTGGCCAGGGCGGCG 30848 ||||||| |||| || | |||||| || |||| || || || | | | ||||| Sbjct 508 CAAAGCC-AAGGTGGTGACCGATGCTGACTCAGACGAAGGGTGACATTGTTCGTGCGGCA 566 Query 30849 CTGCGTAAGCTTGGTGTAGCATCAGATGCAACTCTCACTGATATCGAACCTCAGTCTATG 30908 ||||| ||||| ||| | || || || || || || |||||| |||| || || || ||| Sbjct 567 CTGCGCAAGCTAGGTATCGCCTCTGACGCCACGCTAACTGATGTCGAGCCACAATCAATG 626 Query 30909 CAGGATGCTGTTGACGACCTTGAAGCGATGATGGCTGAGTGGTATCAGGACGGAAAGGGA 30968 |||| | ||| ||||||| ||| |||||||||||| |||||||||||||| || Sbjct 627 GAGGACGGCGTTAACGACCTCGAAATGATGATGGCTGAATGGTATCAGGACGGTCGAGGG 686 Query 30969 ATCATCACCGGATATATATTCTCAGATGATGATAATCCTCCCGCTGAAGGTGATGATCAC 31028 || ||||| || || || | |||| || ||||||| || |||||||| || ||| Sbjct 687 ATTATCACTGGCTACGCTTTTGCTAATGACGACGATCCTCCGGCAGAAGGTGACGACCAC 746 Query 31029 GGTCTTCGCTCAAGCGCAGTCAGCGCAGTATTCCACAATCTGGC-CTGC 31076 | || || ||| | | ||||||||| |||| || || || |||| Sbjct 747 TCGATGCGGTCTAGCTCGATTAGCGCAGTAGTCCATAACCTCGCACTGC 795 >seq262377 Length=537 Score = 125 bits (138), Expect = 2e-24 Identities = 229/329 (70%), Gaps = 6/329 (2%) Strand=Plus/Plus Query 32146 ATGGAGGCGTTGAGGTTCGATTCGCATGAACTGCTGATTATCCATCTCCCGCGTCATGTG 32205 |||||| | || | |||||| || || || | || ||||| || ||| | |||| Sbjct 210 ATGGAGTCCTTACGATTCGATGGTCACGAGCTAATCATCATCCACCTACCGAATGATGTA 269 Query 32206 CTGGTTTACGATGCCTCATCAAGCCAGAACGGGCCGCAATGGTGCGTACTGAAAACCGGT 32265 || || || |||||| |||| |||||||| |||||||||| | |||||||| || Sbjct 270 CTTTGCTATGACGCCTCAGCAAGTCAGAACGGTCCGCAATGGTCAATCCTGAAAACTGGA 329 Query 32266 TTATACGACGATGTTTATCGCGCCATCGATTTCATGTACGAAGGCAACCAGATTACGTGT 32325 | || || | |||| || ||||| |||||||| || || ||||||||||| || Sbjct 330 CTCTATGATACTCCGCATCGTGCTATCGACTTCATGTATGAGGGTAACCAGATTACCTGC 389 Query 32326 GGCGACAAGTCAGAAGCGGTGACAGGGCAGTTGCAATTCGACATTAGTAGT--CAGTACG 32383 || |||||| | || | ||||| ||| | | |||| | | | | | ||||||| Sbjct 390 GGAGACAAGACGCAATCTGTGACCGGGTA-TCTTAATTATGC-TCACTCATCACAGTACG 447 Query 32384 ACAAGCAGCAAGAACATCTGCTGTTTACTCCCATCTTCAAGGCTGATAAC-GCCAGATGC 32442 || |||||||||| || || | || || | ||||||||||||||| || ||| Sbjct 448 ACGCAGAGCAAGAACACCTTCTCTACACGCCACTTTTCAAGGCTGATAACAACCTGAT-A 506 Query 32443 TTCGATCTGGAAGTTGAATCCTCGACAGG 32471 |||||| | ||| | ||| | || ||||| Sbjct 507 TTCGATTTCGAATTAGAAGCATCAACAGG 535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129630149323596